RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CHGAP10645 457 aaKnown RBP27.25■■□□□ 1.95
HDAC6-205ENST00000423941 CCDC144AA2RUR9 1427 aa27.24■■□□□ 1.95
HDAC6-205ENST00000423941 HDGFP51858 240 aaKnown RBP27.23■■□□□ 1.95
HDAC6-205ENST00000423941 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.22■■□□□ 1.95
HDAC6-205ENST00000423941 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
HDAC6-205ENST00000423941 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
HDAC6-205ENST00000423941 PLEKHG1Q9ULL1 1385 aa27.19■■□□□ 1.94
HDAC6-205ENST00000423941 LTBP4Q8N2S1 1624 aa27.17■■□□□ 1.94
HDAC6-205ENST00000423941 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
HDAC6-205ENST00000423941 PPLO60437 1756 aa27.13■■□□□ 1.93
HDAC6-205ENST00000423941 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
HDAC6-205ENST00000423941 ZNF335Q9H4Z2 1342 aaPredicted RBP27.12■■□□□ 1.93
HDAC6-205ENST00000423941 IFT172Q9UG01 1749 aa27.1■■□□□ 1.93
HDAC6-205ENST00000423941 ADAMTS13Q76LX8 1427 aa27.09■■□□□ 1.93
HDAC6-205ENST00000423941 NUTM2DQ5VT03 806 aaPredicted RBP27.09■■□□□ 1.93
HDAC6-205ENST00000423941 DHX57Q6P158 1386 aaKnown RBP27.09■■□□□ 1.93
HDAC6-205ENST00000423941 STRCP1A6NGW2 1772 aa27.08■■□□□ 1.93
HDAC6-205ENST00000423941 PPP1R15AO75807 674 aaPredicted RBP27.08■■□□□ 1.93
HDAC6-205ENST00000423941 TBX22Q9Y458 520 aa27.08■■□□□ 1.93
HDAC6-205ENST00000423941 SETBP1Q9Y6X0 1596 aa27.08■■□□□ 1.93
HDAC6-205ENST00000423941 NRXN3Q9Y4C0 1643 aa27.08■■□□□ 1.93
HDAC6-205ENST00000423941 VGFO15240 615 aaPredicted RBP27.07■■□□□ 1.92
HDAC6-205ENST00000423941 SLC26A8Q96RN1 970 aa27.06■■□□□ 1.92
HDAC6-205ENST00000423941 DIP2AQ14689 1571 aa27.05■■□□□ 1.92
HDAC6-205ENST00000423941 RGL3Q3MIN7 710 aa27.04■■□□□ 1.92
HDAC6-205ENST00000423941 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
HDAC6-205ENST00000423941 CERKQ8TCT0 537 aa27.03■■□□□ 1.92
HDAC6-205ENST00000423941 CPS1P31327 1500 aa27.02■■□□□ 1.92
HDAC6-205ENST00000423941 CHD2O14647 1828 aaKnown RBP27.02■■□□□ 1.92
HDAC6-205ENST00000423941 PIK3R4Q99570 1358 aa26.99■■□□□ 1.91
HDAC6-205ENST00000423941 NWD1Q149M9 1564 aa26.98■■□□□ 1.91
HDAC6-205ENST00000423941 KCNA6P17658 529 aa26.98■■□□□ 1.91
HDAC6-205ENST00000423941 IQSEC2Q5JU85 1478 aa26.98■■□□□ 1.91
HDAC6-205ENST00000423941 SETD1AO15047 1707 aaKnown RBP26.97■■□□□ 1.91
HDAC6-205ENST00000423941 BCANQ96GW7 911 aa26.97■■□□□ 1.91
HDAC6-205ENST00000423941 ADGRF5Q8IZF2 1346 aa26.96■■□□□ 1.91
HDAC6-205ENST00000423941 NRXN1Q9ULB1 1477 aa26.96■■□□□ 1.91
HDAC6-205ENST00000423941 MYOM2P54296 1465 aa26.95■■□□□ 1.91
HDAC6-205ENST00000423941 STAC3Q96MF2 364 aa26.94■■□□□ 1.9
HDAC6-205ENST00000423941 SENP3Q9H4L4 574 aaPredicted RBP26.94■■□□□ 1.9
HDAC6-205ENST00000423941 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
HDAC6-205ENST00000423941 LRRC7Q96NW7 1537 aa26.92■■□□□ 1.9
HDAC6-205ENST00000423941 PIK3C2GO75747 1445 aa26.91■■□□□ 1.9
HDAC6-205ENST00000423941 METP08581 1390 aa26.91■■□□□ 1.9
HDAC6-205ENST00000423941 PTPRUQ92729 1446 aa26.9■■□□□ 1.9
HDAC6-205ENST00000423941 NKTRP30414 1462 aaKnown RBP26.89■■□□□ 1.9
HDAC6-205ENST00000423941 XIRP1Q702N8 1843 aaKnown RBP26.89■■□□□ 1.9
HDAC6-205ENST00000423941 SIN3AQ96ST3 1273 aa26.88■■□□□ 1.89
HDAC6-205ENST00000423941 XRN1Q8IZH2 1706 aaKnown RBP26.87■■□□□ 1.89
HDAC6-205ENST00000423941 DCAF11Q8TEB1 546 aa26.84■■□□□ 1.89
HDAC6-205ENST00000423941 C14orf93Q9H972 538 aaKnown RBP26.84■■□□□ 1.89
HDAC6-205ENST00000423941 PRAG1Q86YV5 1406 aa26.83■■□□□ 1.89
HDAC6-205ENST00000423941 AMOTL2Q9Y2J4 779 aa26.83■■□□□ 1.89
HDAC6-205ENST00000423941 LAMC1P11047 1609 aa26.8■■□□□ 1.88
HDAC6-205ENST00000423941 NCOA3Q9Y6Q9 1424 aa26.8■■□□□ 1.88
HDAC6-205ENST00000423941 PROSER2Q86WR7 435 aaPredicted RBP26.79■■□□□ 1.88
HDAC6-205ENST00000423941 FBXO41Q8TF61 875 aa26.79■■□□□ 1.88
HDAC6-205ENST00000423941 ASXL1Q8IXJ9 1541 aa26.79■■□□□ 1.88
HDAC6-205ENST00000423941 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
HDAC6-205ENST00000423941 TMEM94Q12767 1356 aa26.78■■□□□ 1.88
HDAC6-205ENST00000423941 L3MBTL2Q969R5 705 aa26.76■■□□□ 1.87
HDAC6-205ENST00000423941 NEUROD1Q13562 356 aa26.75■■□□□ 1.87
HDAC6-205ENST00000423941 CFAP70Q5T0N1 1121 aa26.75■■□□□ 1.87
HDAC6-205ENST00000423941 CLSPNQ9HAW4 1339 aa26.74■■□□□ 1.87
HDAC6-205ENST00000423941 TECPR2O15040 1411 aa26.73■■□□□ 1.87
HDAC6-205ENST00000423941 PTCH1Q13635 1447 aa26.72■■□□□ 1.87
HDAC6-205ENST00000423941 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
HDAC6-205ENST00000423941 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
HDAC6-205ENST00000423941 ADGRB1O14514 1584 aa26.71■■□□□ 1.87
HDAC6-205ENST00000423941 KIAA1210Q9ULL0 1709 aa26.71■■□□□ 1.87
HDAC6-205ENST00000423941 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.87
HDAC6-205ENST00000423941 TMEM132EQ6IEE7 984 aa26.7■■□□□ 1.86
HDAC6-205ENST00000423941 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
HDAC6-205ENST00000423941 YTHDC2Q9H6S0 1430 aaKnown RBP26.68■■□□□ 1.86
HDAC6-205ENST00000423941 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
HDAC6-205ENST00000423941 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
HDAC6-205ENST00000423941 UBAP1LF5GYI3 381 aa26.65■■□□□ 1.86
HDAC6-205ENST00000423941 TOM1O60784 492 aa26.65■■□□□ 1.86
HDAC6-205ENST00000423941 ILDR1Q86SU0 546 aaPredicted RBP26.65■■□□□ 1.86
HDAC6-205ENST00000423941 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.64■■□□□ 1.85
HDAC6-205ENST00000423941 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
HDAC6-205ENST00000423941 MSH6P52701 1360 aa26.62■■□□□ 1.85
HDAC6-205ENST00000423941 FAM135BQ49AJ0 1406 aa26.61■■□□□ 1.85
HDAC6-205ENST00000423941 DLC1Q96QB1 1528 aa26.6■■□□□ 1.85
HDAC6-205ENST00000423941 STK26Q9P289 416 aa26.6■■□□□ 1.85
HDAC6-205ENST00000423941 NALCNQ8IZF0 1738 aa26.59■■□□□ 1.85
HDAC6-205ENST00000423941 DCCP43146 1447 aa26.59■■□□□ 1.85
HDAC6-205ENST00000423941 ADGRL3Q9HAR2 1447 aa26.59■■□□□ 1.85
HDAC6-205ENST00000423941 TONSLQ96HA7 1378 aa26.58■■□□□ 1.85
HDAC6-205ENST00000423941 TRPM1Q7Z4N2 1603 aa26.57■■□□□ 1.84
HDAC6-205ENST00000423941 NBPF1Q3BBV0 1214 aa26.56■■□□□ 1.84
HDAC6-205ENST00000423941 TIMELESSQ9UNS1 1208 aa26.56■■□□□ 1.84
HDAC6-205ENST00000423941 NBPF8Q3BBV2 869 aa26.55■■□□□ 1.84
HDAC6-205ENST00000423941 WAPLQ7Z5K2 1190 aa26.54■■□□□ 1.84
HDAC6-205ENST00000423941 CADPS2Q86UW7 1296 aa26.53■■□□□ 1.84
HDAC6-205ENST00000423941 CCER1Q8TC90 406 aaPredicted RBP26.53■■□□□ 1.84
HDAC6-205ENST00000423941 PLEKHH1Q9ULM0 1364 aa26.53■■□□□ 1.84
HDAC6-205ENST00000423941 C14orf37Q86TY3 774 aa26.52■■□□□ 1.84
HDAC6-205ENST00000423941 SLAIN2Q9P270 581 aa26.51■■□□□ 1.83
HDAC6-205ENST00000423941 ARHGEF28Q8N1W1 1705 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms