RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 EID1Q9Y6B2 187 aa31.84■■■□□ 2.69
SEC22C-207ENST00000423701 NPHP4O75161 1426 aaPredicted RBP31.84■■■□□ 2.69
SEC22C-207ENST00000423701 IQGAP1P46940 1657 aa31.84■■■□□ 2.69
SEC22C-207ENST00000423701 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
SEC22C-207ENST00000423701 SPATA31E1Q6ZUB1 1445 aa31.8■■■□□ 2.68
SEC22C-207ENST00000423701 ZNF326Q5BKZ1 582 aaKnown RBP31.79■■■□□ 2.68
SEC22C-207ENST00000423701 NEXMIFQ5QGS0 1516 aa31.79■■■□□ 2.68
SEC22C-207ENST00000423701 HDGFP51858 240 aaKnown RBP31.75■■■□□ 2.67
SEC22C-207ENST00000423701 NUTM2DQ5VT03 806 aaPredicted RBP31.74■■■□□ 2.67
SEC22C-207ENST00000423701 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.74■■■□□ 2.67
SEC22C-207ENST00000423701 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
SEC22C-207ENST00000423701 PLEKHG1Q9ULL1 1385 aa31.72■■■□□ 2.67
SEC22C-207ENST00000423701 PPLO60437 1756 aa31.71■■■□□ 2.67
SEC22C-207ENST00000423701 RGL3Q3MIN7 710 aa31.69■■■□□ 2.66
SEC22C-207ENST00000423701 IFT172Q9UG01 1749 aa31.68■■■□□ 2.66
SEC22C-207ENST00000423701 RPGRIP1LQ68CZ1 1315 aa31.67■■■□□ 2.66
SEC22C-207ENST00000423701 SENP3Q9H4L4 574 aaPredicted RBP31.65■■■□□ 2.66
SEC22C-207ENST00000423701 NRXN3Q9Y4C0 1643 aa31.63■■■□□ 2.65
SEC22C-207ENST00000423701 SETBP1Q9Y6X0 1596 aa31.62■■■□□ 2.65
SEC22C-207ENST00000423701 BCANQ96GW7 911 aa31.62■■■□□ 2.65
SEC22C-207ENST00000423701 ZNF335Q9H4Z2 1342 aaPredicted RBP31.61■■■□□ 2.65
SEC22C-207ENST00000423701 SLC26A8Q96RN1 970 aa31.6■■■□□ 2.65
SEC22C-207ENST00000423701 ADAMTS13Q76LX8 1427 aa31.6■■■□□ 2.65
SEC22C-207ENST00000423701 DIP2AQ14689 1571 aa31.59■■■□□ 2.65
SEC22C-207ENST00000423701 VGFO15240 615 aaPredicted RBP31.59■■■□□ 2.65
SEC22C-207ENST00000423701 LTBP4Q8N2S1 1624 aa31.58■■■□□ 2.65
SEC22C-207ENST00000423701 MYOM2P54296 1465 aa31.54■■■□□ 2.64
SEC22C-207ENST00000423701 SIN3AQ96ST3 1273 aa31.53■■■□□ 2.64
SEC22C-207ENST00000423701 ADGRF5Q8IZF2 1346 aa31.52■■■□□ 2.64
SEC22C-207ENST00000423701 STRCP1A6NGW2 1772 aa31.52■■■□□ 2.64
SEC22C-207ENST00000423701 TBX22Q9Y458 520 aa31.52■■■□□ 2.64
SEC22C-207ENST00000423701 NRXN1Q9ULB1 1477 aa31.49■■■□□ 2.63
SEC22C-207ENST00000423701 SETD1AO15047 1707 aaKnown RBP31.49■■■□□ 2.63
SEC22C-207ENST00000423701 PIK3C2GO75747 1445 aa31.48■■■□□ 2.63
SEC22C-207ENST00000423701 NWD1Q149M9 1564 aa31.48■■■□□ 2.63
SEC22C-207ENST00000423701 CPS1P31327 1500 aa31.47■■■□□ 2.63
SEC22C-207ENST00000423701 ALKQ9UM73 1620 aa31.46■■■□□ 2.63
SEC22C-207ENST00000423701 NEUROD1Q13562 356 aa31.46■■■□□ 2.63
SEC22C-207ENST00000423701 DCAF11Q8TEB1 546 aa31.45■■■□□ 2.62
SEC22C-207ENST00000423701 CHD2O14647 1828 aaKnown RBP31.45■■■□□ 2.62
SEC22C-207ENST00000423701 PIK3R4Q99570 1358 aa31.44■■■□□ 2.62
SEC22C-207ENST00000423701 METP08581 1390 aa31.42■■■□□ 2.62
SEC22C-207ENST00000423701 KCNA6P17658 529 aa31.41■■■□□ 2.62
SEC22C-207ENST00000423701 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
SEC22C-207ENST00000423701 PTPRUQ92729 1446 aa31.39■■■□□ 2.61
SEC22C-207ENST00000423701 NKTRP30414 1462 aaKnown RBP31.38■■■□□ 2.61
SEC22C-207ENST00000423701 CERKQ8TCT0 537 aa31.38■■■□□ 2.61
SEC22C-207ENST00000423701 STAC3Q96MF2 364 aa31.38■■■□□ 2.61
SEC22C-207ENST00000423701 LAMC1P11047 1609 aa31.37■■■□□ 2.61
SEC22C-207ENST00000423701 XRN1Q8IZH2 1706 aaKnown RBP31.37■■■□□ 2.61
SEC22C-207ENST00000423701 LRRC7Q96NW7 1537 aa31.36■■■□□ 2.61
SEC22C-207ENST00000423701 L3MBTL2Q969R5 705 aa31.34■■■□□ 2.61
SEC22C-207ENST00000423701 ASXL1Q8IXJ9 1541 aa31.34■■■□□ 2.61
SEC22C-207ENST00000423701 CLSPNQ9HAW4 1339 aa31.33■■■□□ 2.61
SEC22C-207ENST00000423701 IQSEC2Q5JU85 1478 aa31.32■■■□□ 2.6
SEC22C-207ENST00000423701 C14orf93Q9H972 538 aaKnown RBP31.31■■■□□ 2.6
SEC22C-207ENST00000423701 AMOTL2Q9Y2J4 779 aa31.31■■■□□ 2.6
SEC22C-207ENST00000423701 CCER1Q8TC90 406 aaPredicted RBP31.3■■■□□ 2.6
SEC22C-207ENST00000423701 CFAP70Q5T0N1 1121 aa31.29■■■□□ 2.6
SEC22C-207ENST00000423701 TONSLQ96HA7 1378 aa31.28■■■□□ 2.6
SEC22C-207ENST00000423701 XIRP1Q702N8 1843 aaKnown RBP31.28■■■□□ 2.6
SEC22C-207ENST00000423701 PRAG1Q86YV5 1406 aa31.28■■■□□ 2.6
SEC22C-207ENST00000423701 PROSER2Q86WR7 435 aaPredicted RBP31.25■■■□□ 2.59
SEC22C-207ENST00000423701 TMEM94Q12767 1356 aa31.24■■■□□ 2.59
SEC22C-207ENST00000423701 TMEM132EQ6IEE7 984 aa31.24■■■□□ 2.59
SEC22C-207ENST00000423701 ADGRB1O14514 1584 aa31.24■■■□□ 2.59
SEC22C-207ENST00000423701 KIAA1210Q9ULL0 1709 aa31.22■■■□□ 2.59
SEC22C-207ENST00000423701 PTCH1Q13635 1447 aa31.22■■■□□ 2.59
SEC22C-207ENST00000423701 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
SEC22C-207ENST00000423701 KNDC1Q76NI1 1749 aa31.2■■■□□ 2.59
SEC22C-207ENST00000423701 LRPPRCP42704 1394 aaKnown RBP31.2■■■□□ 2.59
SEC22C-207ENST00000423701 YTHDC2Q9H6S0 1430 aaKnown RBP31.2■■■□□ 2.59
SEC22C-207ENST00000423701 TECPR2O15040 1411 aa31.18■■■□□ 2.58
SEC22C-207ENST00000423701 ROBO2Q9HCK4 1378 aa31.17■■■□□ 2.58
SEC22C-207ENST00000423701 STK26Q9P289 416 aa31.15■■■□□ 2.58
SEC22C-207ENST00000423701 ABCC11Q96J66 1382 aa31.15■■■□□ 2.58
SEC22C-207ENST00000423701 NCOA3Q9Y6Q9 1424 aa31.15■■■□□ 2.58
SEC22C-207ENST00000423701 TRPM1Q7Z4N2 1603 aa31.14■■■□□ 2.58
SEC22C-207ENST00000423701 NALCNQ8IZF0 1738 aa31.09■■■□□ 2.57
SEC22C-207ENST00000423701 NBPF8Q3BBV2 869 aa31.08■■■□□ 2.57
SEC22C-207ENST00000423701 MSH6P52701 1360 aa31.08■■■□□ 2.57
SEC22C-207ENST00000423701 DLC1Q96QB1 1528 aa31.08■■■□□ 2.57
SEC22C-207ENST00000423701 NBPF1Q3BBV0 1214 aa31.08■■■□□ 2.57
SEC22C-207ENST00000423701 C14orf37Q86TY3 774 aa31.07■■■□□ 2.56
SEC22C-207ENST00000423701 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.06■■■□□ 2.56
SEC22C-207ENST00000423701 FAM135BQ49AJ0 1406 aa31.05■■■□□ 2.56
SEC22C-207ENST00000423701 ADGRL3Q9HAR2 1447 aa31.05■■■□□ 2.56
SEC22C-207ENST00000423701 UBAP1LF5GYI3 381 aa31.05■■■□□ 2.56
SEC22C-207ENST00000423701 TIMELESSQ9UNS1 1208 aa31.05■■■□□ 2.56
SEC22C-207ENST00000423701 FBXO41Q8TF61 875 aa31.04■■■□□ 2.56
SEC22C-207ENST00000423701 PLEKHH1Q9ULM0 1364 aa31.04■■■□□ 2.56
SEC22C-207ENST00000423701 ARHGEF28Q8N1W1 1705 aaKnown RBP31.03■■■□□ 2.56
SEC22C-207ENST00000423701 WAPLQ7Z5K2 1190 aa31.02■■■□□ 2.56
SEC22C-207ENST00000423701 TRAK1Q9UPV9 953 aa31.02■■■□□ 2.56
SEC22C-207ENST00000423701 SIRT1Q96EB6 747 aa31.01■■■□□ 2.56
SEC22C-207ENST00000423701 TOM1O60784 492 aa31.01■■■□□ 2.55
SEC22C-207ENST00000423701 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
SEC22C-207ENST00000423701 RALGAPBQ86X10 1494 aa31■■■□□ 2.55
SEC22C-207ENST00000423701 ROCK2O75116 1388 aaKnown RBP31■■■□□ 2.55
SEC22C-207ENST00000423701 DCCP43146 1447 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms