RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 SCAF1Q9H7N4 1312 aaKnown RBP26.35■■□□□ 1.81
TNFAIP3-203ENST00000421450 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
TNFAIP3-203ENST00000421450 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.34■■□□□ 1.81
TNFAIP3-203ENST00000421450 STRCP1A6NGW2 1772 aa26.33■■□□□ 1.81
TNFAIP3-203ENST00000421450 TOM1O60784 492 aa26.33■■□□□ 1.81
TNFAIP3-203ENST00000421450 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
TNFAIP3-203ENST00000421450 SLC4A1APQ9BWU0 796 aaKnown RBP26.32■■□□□ 1.8
TNFAIP3-203ENST00000421450 ZFYVE9O95405 1425 aa26.31■■□□□ 1.8
TNFAIP3-203ENST00000421450 PIP4K2BP78356 416 aa26.3■■□□□ 1.8
TNFAIP3-203ENST00000421450 LRRC7Q96NW7 1537 aa26.29■■□□□ 1.8
TNFAIP3-203ENST00000421450 ZNF326Q5BKZ1 582 aaKnown RBP26.29■■□□□ 1.8
TNFAIP3-203ENST00000421450 PLEKHG1Q9ULL1 1385 aa26.28■■□□□ 1.8
TNFAIP3-203ENST00000421450 KCNA6P17658 529 aa26.25■■□□□ 1.79
TNFAIP3-203ENST00000421450 TRPM2O94759 1503 aa26.22■■□□□ 1.79
TNFAIP3-203ENST00000421450 PROSER2Q86WR7 435 aaPredicted RBP26.21■■□□□ 1.79
TNFAIP3-203ENST00000421450 CLTCL1P53675 1640 aa26.21■■□□□ 1.79
TNFAIP3-203ENST00000421450 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
TNFAIP3-203ENST00000421450 KIF1BO60333 1816 aa26.18■■□□□ 1.78
TNFAIP3-203ENST00000421450 FOXD1Q16676 465 aa26.17■■□□□ 1.78
TNFAIP3-203ENST00000421450 SETD5Q9C0A6 1442 aa26.16■■□□□ 1.78
TNFAIP3-203ENST00000421450 TMEM94Q12767 1356 aa26.16■■□□□ 1.78
TNFAIP3-203ENST00000421450 RBM33Q96EV2 1170 aaKnown RBP26.15■■□□□ 1.78
TNFAIP3-203ENST00000421450 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
TNFAIP3-203ENST00000421450 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
TNFAIP3-203ENST00000421450 XIRP1Q702N8 1843 aaKnown RBP26.13■■□□□ 1.77
TNFAIP3-203ENST00000421450 NKTRP30414 1462 aaKnown RBP26.12■■□□□ 1.77
TNFAIP3-203ENST00000421450 ADAMTS13Q76LX8 1427 aa26.12■■□□□ 1.77
TNFAIP3-203ENST00000421450 NWD1Q149M9 1564 aa26.12■■□□□ 1.77
TNFAIP3-203ENST00000421450 CHD2O14647 1828 aaKnown RBP26.11■■□□□ 1.77
TNFAIP3-203ENST00000421450 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
TNFAIP3-203ENST00000421450 HSPA1LP34931 641 aa26.1■■□□□ 1.77
TNFAIP3-203ENST00000421450 ALKQ9UM73 1620 aa26.08■■□□□ 1.77
TNFAIP3-203ENST00000421450 NEXMIFQ5QGS0 1516 aa26.06■■□□□ 1.76
TNFAIP3-203ENST00000421450 C14orf37Q86TY3 774 aa26.06■■□□□ 1.76
TNFAIP3-203ENST00000421450 PIK3R4Q99570 1358 aa26.06■■□□□ 1.76
TNFAIP3-203ENST00000421450 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
TNFAIP3-203ENST00000421450 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
TNFAIP3-203ENST00000421450 VGFO15240 615 aaPredicted RBP26.04■■□□□ 1.76
TNFAIP3-203ENST00000421450 AMOTL2Q9Y2J4 779 aa26.04■■□□□ 1.76
TNFAIP3-203ENST00000421450 MSH6P52701 1360 aa26.04■■□□□ 1.76
TNFAIP3-203ENST00000421450 RPGRIP1LQ68CZ1 1315 aa26.02■■□□□ 1.76
TNFAIP3-203ENST00000421450 DISP3Q9P2K9 1392 aa26.02■■□□□ 1.76
TNFAIP3-203ENST00000421450 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
TNFAIP3-203ENST00000421450 NRXN3Q9Y4C0 1643 aa26■■□□□ 1.75
TNFAIP3-203ENST00000421450 RGL3Q3MIN7 710 aa25.99■■□□□ 1.75
TNFAIP3-203ENST00000421450 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
TNFAIP3-203ENST00000421450 METP08581 1390 aa25.95■■□□□ 1.75
TNFAIP3-203ENST00000421450 NCOA3Q9Y6Q9 1424 aa25.94■■□□□ 1.74
TNFAIP3-203ENST00000421450 PPLO60437 1756 aa25.93■■□□□ 1.74
TNFAIP3-203ENST00000421450 FAM135BQ49AJ0 1406 aa25.92■■□□□ 1.74
TNFAIP3-203ENST00000421450 SLAIN2Q9P270 581 aa25.92■■□□□ 1.74
TNFAIP3-203ENST00000421450 ATF3P18847 181 aa25.91■■□□□ 1.74
TNFAIP3-203ENST00000421450 C19orf44Q9H6X5 657 aa25.91■■□□□ 1.74
TNFAIP3-203ENST00000421450 XRN1Q8IZH2 1706 aaKnown RBP25.89■■□□□ 1.74
TNFAIP3-203ENST00000421450 SPATA31E1Q6ZUB1 1445 aa25.88■■□□□ 1.73
TNFAIP3-203ENST00000421450 CADPS2Q86UW7 1296 aa25.88■■□□□ 1.73
TNFAIP3-203ENST00000421450 ROBO1Q9Y6N7 1651 aa25.87■■□□□ 1.73
TNFAIP3-203ENST00000421450 HRCP23327 699 aa25.87■■□□□ 1.73
TNFAIP3-203ENST00000421450 ADGRF5Q8IZF2 1346 aa25.86■■□□□ 1.73
TNFAIP3-203ENST00000421450 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.85■■□□□ 1.73
TNFAIP3-203ENST00000421450 ANKRD30BQ9BXX2 1392 aa25.85■■□□□ 1.73
TNFAIP3-203ENST00000421450 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
TNFAIP3-203ENST00000421450 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
TNFAIP3-203ENST00000421450 MED1Q15648 1581 aaPredicted RBP25.78■■□□□ 1.72
TNFAIP3-203ENST00000421450 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
TNFAIP3-203ENST00000421450 DCCP43146 1447 aa25.76■■□□□ 1.71
TNFAIP3-203ENST00000421450 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
TNFAIP3-203ENST00000421450 STK26Q9P289 416 aa25.75■■□□□ 1.71
TNFAIP3-203ENST00000421450 PHLPP1O60346 1717 aa25.74■■□□□ 1.71
TNFAIP3-203ENST00000421450 PTCH1Q13635 1447 aa25.74■■□□□ 1.71
TNFAIP3-203ENST00000421450 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
TNFAIP3-203ENST00000421450 TMEM132EQ6IEE7 984 aa25.72■■□□□ 1.71
TNFAIP3-203ENST00000421450 ILDR2Q71H61 639 aa25.72■■□□□ 1.71
TNFAIP3-203ENST00000421450 PIK3C2GO75747 1445 aa25.71■■□□□ 1.71
TNFAIP3-203ENST00000421450 NALCNQ8IZF0 1738 aa25.71■■□□□ 1.71
TNFAIP3-203ENST00000421450 BRINP3Q76B58 766 aa25.69■■□□□ 1.7
TNFAIP3-203ENST00000421450 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
TNFAIP3-203ENST00000421450 MST1RQ04912 1400 aa25.68■■□□□ 1.7
TNFAIP3-203ENST00000421450 MYOM2P54296 1465 aa25.67■■□□□ 1.7
TNFAIP3-203ENST00000421450 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
TNFAIP3-203ENST00000421450 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
TNFAIP3-203ENST00000421450 DCAF11Q8TEB1 546 aa25.66■■□□□ 1.7
TNFAIP3-203ENST00000421450 C14orf93Q9H972 538 aaKnown RBP25.66■■□□□ 1.7
TNFAIP3-203ENST00000421450 PRAG1Q86YV5 1406 aa25.65■■□□□ 1.7
TNFAIP3-203ENST00000421450 JCADQ9P266 1359 aa25.64■■□□□ 1.69
TNFAIP3-203ENST00000421450 WAPLQ7Z5K2 1190 aa25.63■■□□□ 1.69
TNFAIP3-203ENST00000421450 YTHDC2Q9H6S0 1430 aaKnown RBP25.63■■□□□ 1.69
TNFAIP3-203ENST00000421450 NRXN1Q9ULB1 1477 aa25.62■■□□□ 1.69
TNFAIP3-203ENST00000421450 DHX57Q6P158 1386 aaKnown RBP25.62■■□□□ 1.69
TNFAIP3-203ENST00000421450 ABCC11Q96J66 1382 aa25.62■■□□□ 1.69
TNFAIP3-203ENST00000421450 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
TNFAIP3-203ENST00000421450 ASXL1Q8IXJ9 1541 aa25.62■■□□□ 1.69
TNFAIP3-203ENST00000421450 LAMC1P11047 1609 aa25.61■■□□□ 1.69
TNFAIP3-203ENST00000421450 COL16A1Q07092 1604 aaPredicted RBP25.61■■□□□ 1.69
TNFAIP3-203ENST00000421450 TECPR2O15040 1411 aa25.59■■□□□ 1.69
TNFAIP3-203ENST00000421450 C1orf167Q5SNV9 1468 aa25.59■■□□□ 1.69
TNFAIP3-203ENST00000421450 KNDC1Q76NI1 1749 aa25.58■■□□□ 1.69
TNFAIP3-203ENST00000421450 STAC3Q96MF2 364 aa25.57■■□□□ 1.68
TNFAIP3-203ENST00000421450 DDX17Q92841 729 aaKnown RBP25.56■■□□□ 1.68
TNFAIP3-203ENST00000421450 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 940.2 ms