RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 HRCP23327 699 aa26.46■■□□□ 1.83
MSL3-208ENST00000421368 STRCP1A6NGW2 1772 aa26.43■■□□□ 1.82
MSL3-208ENST00000421368 CERKQ8TCT0 537 aa26.41■■□□□ 1.82
MSL3-208ENST00000421368 NEXMIFQ5QGS0 1516 aa26.38■■□□□ 1.81
MSL3-208ENST00000421368 PLEKHG1Q9ULL1 1385 aa26.37■■□□□ 1.81
MSL3-208ENST00000421368 HDGFP51858 240 aaKnown RBP26.37■■□□□ 1.81
MSL3-208ENST00000421368 NUTM2DQ5VT03 806 aaPredicted RBP26.37■■□□□ 1.81
MSL3-208ENST00000421368 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.37■■□□□ 1.81
MSL3-208ENST00000421368 CCDC144AA2RUR9 1427 aa26.37■■□□□ 1.81
MSL3-208ENST00000421368 PPP1R15AO75807 674 aaPredicted RBP26.36■■□□□ 1.81
MSL3-208ENST00000421368 ZNF326Q5BKZ1 582 aaKnown RBP26.35■■□□□ 1.81
MSL3-208ENST00000421368 PPLO60437 1756 aa26.35■■□□□ 1.81
MSL3-208ENST00000421368 CPS1P31327 1500 aa26.34■■□□□ 1.81
MSL3-208ENST00000421368 TRIM26Q12899 539 aaPredicted RBP26.33■■□□□ 1.81
MSL3-208ENST00000421368 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
MSL3-208ENST00000421368 SLC26A8Q96RN1 970 aa26.32■■□□□ 1.8
MSL3-208ENST00000421368 NRXN3Q9Y4C0 1643 aa26.31■■□□□ 1.8
MSL3-208ENST00000421368 BCANQ96GW7 911 aa26.3■■□□□ 1.8
MSL3-208ENST00000421368 IQSEC2Q5JU85 1478 aa26.3■■□□□ 1.8
MSL3-208ENST00000421368 IFT172Q9UG01 1749 aa26.29■■□□□ 1.8
MSL3-208ENST00000421368 CHD2O14647 1828 aaKnown RBP26.29■■□□□ 1.8
MSL3-208ENST00000421368 ANKRD30BQ9BXX2 1392 aa26.29■■□□□ 1.8
MSL3-208ENST00000421368 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
MSL3-208ENST00000421368 ADAMTS13Q76LX8 1427 aa26.29■■□□□ 1.8
MSL3-208ENST00000421368 DIP2AQ14689 1571 aa26.28■■□□□ 1.8
MSL3-208ENST00000421368 SETBP1Q9Y6X0 1596 aa26.27■■□□□ 1.8
MSL3-208ENST00000421368 NWD1Q149M9 1564 aa26.25■■□□□ 1.79
MSL3-208ENST00000421368 XIRP1Q702N8 1843 aaKnown RBP26.25■■□□□ 1.79
MSL3-208ENST00000421368 RPGRIP1LQ68CZ1 1315 aa26.23■■□□□ 1.79
MSL3-208ENST00000421368 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
MSL3-208ENST00000421368 TBX22Q9Y458 520 aa26.22■■□□□ 1.79
MSL3-208ENST00000421368 LRRC7Q96NW7 1537 aa26.22■■□□□ 1.79
MSL3-208ENST00000421368 ILDR1Q86SU0 546 aaPredicted RBP26.21■■□□□ 1.79
MSL3-208ENST00000421368 RGL3Q3MIN7 710 aa26.2■■□□□ 1.78
MSL3-208ENST00000421368 SETD1AO15047 1707 aaKnown RBP26.19■■□□□ 1.78
MSL3-208ENST00000421368 KCNA6P17658 529 aa26.19■■□□□ 1.78
MSL3-208ENST00000421368 VGFO15240 615 aaPredicted RBP26.17■■□□□ 1.78
MSL3-208ENST00000421368 NKTRP30414 1462 aaKnown RBP26.16■■□□□ 1.78
MSL3-208ENST00000421368 PIK3R4Q99570 1358 aa26.14■■□□□ 1.78
MSL3-208ENST00000421368 ALKQ9UM73 1620 aa26.13■■□□□ 1.77
MSL3-208ENST00000421368 XRN1Q8IZH2 1706 aaKnown RBP26.12■■□□□ 1.77
MSL3-208ENST00000421368 PTPRUQ92729 1446 aa26.12■■□□□ 1.77
MSL3-208ENST00000421368 ADGRF5Q8IZF2 1346 aa26.11■■□□□ 1.77
MSL3-208ENST00000421368 METP08581 1390 aa26.1■■□□□ 1.77
MSL3-208ENST00000421368 TMEM94Q12767 1356 aa26.07■■□□□ 1.76
MSL3-208ENST00000421368 MYOM2P54296 1465 aa26.07■■□□□ 1.76
MSL3-208ENST00000421368 PROSER2Q86WR7 435 aaPredicted RBP26.07■■□□□ 1.76
MSL3-208ENST00000421368 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
MSL3-208ENST00000421368 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
MSL3-208ENST00000421368 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
MSL3-208ENST00000421368 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
MSL3-208ENST00000421368 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
MSL3-208ENST00000421368 RBM33Q96EV2 1170 aaKnown RBP26.04■■□□□ 1.76
MSL3-208ENST00000421368 LAMC1P11047 1609 aa25.99■■□□□ 1.75
MSL3-208ENST00000421368 ASXL1Q8IXJ9 1541 aa25.99■■□□□ 1.75
MSL3-208ENST00000421368 TOM1O60784 492 aa25.98■■□□□ 1.75
MSL3-208ENST00000421368 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
MSL3-208ENST00000421368 NCOA3Q9Y6Q9 1424 aa25.96■■□□□ 1.75
MSL3-208ENST00000421368 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.95■■□□□ 1.74
MSL3-208ENST00000421368 KDM2AQ9Y2K7 1162 aa25.94■■□□□ 1.74
MSL3-208ENST00000421368 PRAG1Q86YV5 1406 aa25.94■■□□□ 1.74
MSL3-208ENST00000421368 KNDC1Q76NI1 1749 aa25.94■■□□□ 1.74
MSL3-208ENST00000421368 SIN3AQ96ST3 1273 aa25.93■■□□□ 1.74
MSL3-208ENST00000421368 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
MSL3-208ENST00000421368 MSH6P52701 1360 aa25.93■■□□□ 1.74
MSL3-208ENST00000421368 PTCH1Q13635 1447 aa25.92■■□□□ 1.74
MSL3-208ENST00000421368 C14orf93Q9H972 538 aaKnown RBP25.92■■□□□ 1.74
MSL3-208ENST00000421368 NALCNQ8IZF0 1738 aa25.91■■□□□ 1.74
MSL3-208ENST00000421368 PIP4K2BP78356 416 aa25.91■■□□□ 1.74
MSL3-208ENST00000421368 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
MSL3-208ENST00000421368 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
MSL3-208ENST00000421368 TMEM132EQ6IEE7 984 aa25.89■■□□□ 1.74
MSL3-208ENST00000421368 STAC3Q96MF2 364 aa25.89■■□□□ 1.74
MSL3-208ENST00000421368 ROBO2Q9HCK4 1378 aa25.89■■□□□ 1.74
MSL3-208ENST00000421368 C14orf37Q86TY3 774 aa25.88■■□□□ 1.73
MSL3-208ENST00000421368 LRPPRCP42704 1394 aaKnown RBP25.87■■□□□ 1.73
MSL3-208ENST00000421368 TECPR2O15040 1411 aa25.87■■□□□ 1.73
MSL3-208ENST00000421368 YTHDC2Q9H6S0 1430 aaKnown RBP25.86■■□□□ 1.73
MSL3-208ENST00000421368 NEUROD1Q13562 356 aa25.85■■□□□ 1.73
MSL3-208ENST00000421368 ADGRB1O14514 1584 aa25.85■■□□□ 1.73
MSL3-208ENST00000421368 C19orf44Q9H6X5 657 aa25.84■■□□□ 1.73
MSL3-208ENST00000421368 ADGRL3Q9HAR2 1447 aa25.84■■□□□ 1.73
MSL3-208ENST00000421368 STK26Q9P289 416 aa25.84■■□□□ 1.73
MSL3-208ENST00000421368 ABCC11Q96J66 1382 aa25.83■■□□□ 1.73
MSL3-208ENST00000421368 KIAA1210Q9ULL0 1709 aa25.83■■□□□ 1.73
MSL3-208ENST00000421368 ROBO1Q9Y6N7 1651 aa25.83■■□□□ 1.73
MSL3-208ENST00000421368 DCCP43146 1447 aa25.81■■□□□ 1.72
MSL3-208ENST00000421368 L3MBTL2Q969R5 705 aa25.81■■□□□ 1.72
MSL3-208ENST00000421368 CADPS2Q86UW7 1296 aa25.78■■□□□ 1.72
MSL3-208ENST00000421368 FAM135BQ49AJ0 1406 aa25.78■■□□□ 1.72
MSL3-208ENST00000421368 ATF3P18847 181 aa25.77■■□□□ 1.72
MSL3-208ENST00000421368 SLAIN2Q9P270 581 aa25.77■■□□□ 1.72
MSL3-208ENST00000421368 DLC1Q96QB1 1528 aa25.75■■□□□ 1.71
MSL3-208ENST00000421368 PLEKHH1Q9ULM0 1364 aa25.75■■□□□ 1.71
MSL3-208ENST00000421368 HSPA1LP34931 641 aa25.75■■□□□ 1.71
MSL3-208ENST00000421368 WAPLQ7Z5K2 1190 aa25.75■■□□□ 1.71
MSL3-208ENST00000421368 MST1RQ04912 1400 aa25.73■■□□□ 1.71
MSL3-208ENST00000421368 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
MSL3-208ENST00000421368 SIRT1Q96EB6 747 aa25.72■■□□□ 1.71
MSL3-208ENST00000421368 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms