RNA–Protein interactions for RNA: ENST00000421259.2

MATN3-202, Transcript of matrilin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MATN3, Length 1,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-202ENST00000421259 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
MATN3-202ENST00000421259 ZFYVE9O95405 1425 aa24.34■■□□□ 1.49
MATN3-202ENST00000421259 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.49
MATN3-202ENST00000421259 MPHOSPH9Q99550 1183 aa24.32■■□□□ 1.48
MATN3-202ENST00000421259 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
MATN3-202ENST00000421259 RAB3GAP2Q9H2M9 1393 aa24.3■■□□□ 1.48
MATN3-202ENST00000421259 CLTCL1P53675 1640 aa24.3■■□□□ 1.48
MATN3-202ENST00000421259 TRPM2O94759 1503 aa24.3■■□□□ 1.48
MATN3-202ENST00000421259 STRCP1A6NGW2 1772 aa24.29■■□□□ 1.48
MATN3-202ENST00000421259 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
MATN3-202ENST00000421259 CPS1P31327 1500 aa24.29■■□□□ 1.48
MATN3-202ENST00000421259 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
MATN3-202ENST00000421259 PLEKHG1Q9ULL1 1385 aa24.26■■□□□ 1.47
MATN3-202ENST00000421259 UBAP1LF5GYI3 381 aa24.26■■□□□ 1.47
MATN3-202ENST00000421259 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
MATN3-202ENST00000421259 KIF1BO60333 1816 aa24.21■■□□□ 1.47
MATN3-202ENST00000421259 KCNA6P17658 529 aa24.2■■□□□ 1.46
MATN3-202ENST00000421259 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
MATN3-202ENST00000421259 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
MATN3-202ENST00000421259 TBX22Q9Y458 520 aa24.18■■□□□ 1.46
MATN3-202ENST00000421259 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
MATN3-202ENST00000421259 PROSER2Q86WR7 435 aaPredicted RBP24.15■■□□□ 1.46
MATN3-202ENST00000421259 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.46
MATN3-202ENST00000421259 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
MATN3-202ENST00000421259 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
MATN3-202ENST00000421259 NEXMIFQ5QGS0 1516 aa24.13■■□□□ 1.45
MATN3-202ENST00000421259 TOM1O60784 492 aa24.13■■□□□ 1.45
MATN3-202ENST00000421259 RGL3Q3MIN7 710 aa24.13■■□□□ 1.45
MATN3-202ENST00000421259 HRCP23327 699 aa24.11■■□□□ 1.45
MATN3-202ENST00000421259 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
MATN3-202ENST00000421259 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
MATN3-202ENST00000421259 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
MATN3-202ENST00000421259 VGFO15240 615 aaPredicted RBP24.08■■□□□ 1.44
MATN3-202ENST00000421259 NWD1Q149M9 1564 aa24.08■■□□□ 1.44
MATN3-202ENST00000421259 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
MATN3-202ENST00000421259 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
MATN3-202ENST00000421259 DIP2AQ14689 1571 aa24.06■■□□□ 1.44
MATN3-202ENST00000421259 AMOTL2Q9Y2J4 779 aa24.06■■□□□ 1.44
MATN3-202ENST00000421259 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
MATN3-202ENST00000421259 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
MATN3-202ENST00000421259 ALKQ9UM73 1620 aa24.04■■□□□ 1.44
MATN3-202ENST00000421259 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
MATN3-202ENST00000421259 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
MATN3-202ENST00000421259 METP08581 1390 aa24.04■■□□□ 1.44
MATN3-202ENST00000421259 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
MATN3-202ENST00000421259 PPLO60437 1756 aa24.02■■□□□ 1.44
MATN3-202ENST00000421259 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
MATN3-202ENST00000421259 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
MATN3-202ENST00000421259 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
MATN3-202ENST00000421259 HSPA1LP34931 641 aa23.97■■□□□ 1.43
MATN3-202ENST00000421259 MSH6P52701 1360 aa23.95■■□□□ 1.42
MATN3-202ENST00000421259 IFT172Q9UG01 1749 aa23.92■■□□□ 1.42
MATN3-202ENST00000421259 XRN1Q8IZH2 1706 aaKnown RBP23.91■■□□□ 1.42
MATN3-202ENST00000421259 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
MATN3-202ENST00000421259 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.41
MATN3-202ENST00000421259 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
MATN3-202ENST00000421259 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
MATN3-202ENST00000421259 SLAIN2Q9P270 581 aa23.87■■□□□ 1.41
MATN3-202ENST00000421259 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
MATN3-202ENST00000421259 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
MATN3-202ENST00000421259 ATF3P18847 181 aa23.84■■□□□ 1.41
MATN3-202ENST00000421259 STK26Q9P289 416 aa23.84■■□□□ 1.41
MATN3-202ENST00000421259 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
MATN3-202ENST00000421259 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
MATN3-202ENST00000421259 ROBO2Q9HCK4 1378 aa23.84■■□□□ 1.41
MATN3-202ENST00000421259 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
MATN3-202ENST00000421259 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.41
MATN3-202ENST00000421259 CADPS2Q86UW7 1296 aa23.83■■□□□ 1.4
MATN3-202ENST00000421259 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
MATN3-202ENST00000421259 ROBO1Q9Y6N7 1651 aa23.8■■□□□ 1.4
MATN3-202ENST00000421259 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
MATN3-202ENST00000421259 MYOM2P54296 1465 aa23.8■■□□□ 1.4
MATN3-202ENST00000421259 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
MATN3-202ENST00000421259 PTCH1Q13635 1447 aa23.78■■□□□ 1.4
MATN3-202ENST00000421259 ASXL1Q8IXJ9 1541 aa23.77■■□□□ 1.4
MATN3-202ENST00000421259 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
MATN3-202ENST00000421259 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
MATN3-202ENST00000421259 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
MATN3-202ENST00000421259 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
MATN3-202ENST00000421259 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
MATN3-202ENST00000421259 DCCP43146 1447 aa23.73■■□□□ 1.39
MATN3-202ENST00000421259 SIN3AQ96ST3 1273 aa23.73■■□□□ 1.39
MATN3-202ENST00000421259 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
MATN3-202ENST00000421259 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
MATN3-202ENST00000421259 ABCC11Q96J66 1382 aa23.72■■□□□ 1.39
MATN3-202ENST00000421259 DISP3Q9P2K9 1392 aa23.72■■□□□ 1.39
MATN3-202ENST00000421259 MST1RQ04912 1400 aa23.7■■□□□ 1.38
MATN3-202ENST00000421259 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
MATN3-202ENST00000421259 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
MATN3-202ENST00000421259 BRINP3Q76B58 766 aa23.69■■□□□ 1.38
MATN3-202ENST00000421259 TECPR2O15040 1411 aa23.69■■□□□ 1.38
MATN3-202ENST00000421259 STAC3Q96MF2 364 aa23.68■■□□□ 1.38
MATN3-202ENST00000421259 LAMC1P11047 1609 aa23.68■■□□□ 1.38
MATN3-202ENST00000421259 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
MATN3-202ENST00000421259 KNDC1Q76NI1 1749 aa23.65■■□□□ 1.38
MATN3-202ENST00000421259 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
MATN3-202ENST00000421259 TRAK1Q9UPV9 953 aa23.64■■□□□ 1.37
MATN3-202ENST00000421259 PRAM1Q96QH2 718 aa23.63■■□□□ 1.37
MATN3-202ENST00000421259 NUTM2FA1L443 756 aa23.62■■□□□ 1.37
MATN3-202ENST00000421259 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms