RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 KTN1Q86UP2 1357 aaKnown RBP8.03□□□□□ -1.12
CHD2-202ENST00000420239 PRKAR2AP13861 404 aaKnown RBP8.03□□□□□ -1.12
CHD2-202ENST00000420239 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
CHD2-202ENST00000420239 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
CHD2-202ENST00000420239 KDM5CP41229 1560 aa8.03□□□□□ -1.12
CHD2-202ENST00000420239 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
CHD2-202ENST00000420239 MFSD10Q14728 455 aa8.03□□□□□ -1.12
CHD2-202ENST00000420239 POLA1P09884 1462 aaPredicted RBP8.02□□□□□ -1.12
CHD2-202ENST00000420239 FRAT2O75474 233 aaPredicted RBP8.02□□□□□ -1.13
CHD2-202ENST00000420239 KIF12Q96FN5 646 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 KIF14Q15058 1648 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 INSRP06213 1382 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 E9PCH4 1651 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 CRISPLD2Q9H0B8 497 aa8.02□□□□□ -1.13
CHD2-202ENST00000420239 DNMT1P26358 1616 aaKnown RBP8.01□□□□□ -1.13
CHD2-202ENST00000420239 RRP7BPQ9NSQ0 103 aa8.01□□□□□ -1.13
CHD2-202ENST00000420239 TOPBP1Q92547 1522 aa8.01□□□□□ -1.13
CHD2-202ENST00000420239 BRD4O60885 1362 aaPredicted RBP8.01□□□□□ -1.13
CHD2-202ENST00000420239 ZMYM4Q5VZL5 1548 aa8.01□□□□□ -1.13
CHD2-202ENST00000420239 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
CHD2-202ENST00000420239 FANCD2Q9BXW9 1451 aa8□□□□□ -1.13
CHD2-202ENST00000420239 PDE3BQ13370 1112 aa8□□□□□ -1.13
CHD2-202ENST00000420239 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
CHD2-202ENST00000420239 UHRF1BP1Q6BDS2 1440 aa8□□□□□ -1.13
CHD2-202ENST00000420239 GLIPR1L2Q4G1C9 344 aa7.99□□□□□ -1.13
CHD2-202ENST00000420239 BARGINQ6ZT62 677 aa7.99□□□□□ -1.13
CHD2-202ENST00000420239 DDX27Q96GQ7 796 aaKnown RBP7.99□□□□□ -1.13
CHD2-202ENST00000420239 ARIH1Q9Y4X5 557 aaPredicted RBP7.99□□□□□ -1.13
CHD2-202ENST00000420239 NESP48681 1621 aa7.99□□□□□ -1.13
CHD2-202ENST00000420239 SMYD5Q6GMV2 418 aa7.99□□□□□ -1.13
CHD2-202ENST00000420239 RCAN3Q9UKA8 241 aa7.99□□□□□ -1.13
CHD2-202ENST00000420239 DAPK1P53355 1430 aa7.98□□□□□ -1.13
CHD2-202ENST00000420239 KIF15Q9NS87 1388 aa7.98□□□□□ -1.13
CHD2-202ENST00000420239 PZPP20742 1482 aa7.98□□□□□ -1.13
CHD2-202ENST00000420239 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
CHD2-202ENST00000420239 USP47Q96K76 1375 aa7.98□□□□□ -1.13
CHD2-202ENST00000420239 RALGAPBQ86X10 1494 aa7.97□□□□□ -1.13
CHD2-202ENST00000420239 EPRSP07814 1512 aaKnown RBP7.97□□□□□ -1.13
CHD2-202ENST00000420239 GPBP1L1Q9HC44 474 aaPredicted RBP7.97□□□□□ -1.13
CHD2-202ENST00000420239 POGKQ9P215 609 aa7.97□□□□□ -1.13
CHD2-202ENST00000420239 RALBP1Q15311 655 aa7.97□□□□□ -1.13
CHD2-202ENST00000420239 RBM26Q5T8P6 1007 aaKnown RBP7.97□□□□□ -1.13
CHD2-202ENST00000420239 ABCC5O15440 1437 aa7.96□□□□□ -1.13
CHD2-202ENST00000420239 GAPVD1Q14C86 1478 aa7.96□□□□□ -1.14
CHD2-202ENST00000420239 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.14
CHD2-202ENST00000420239 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
CHD2-202ENST00000420239 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
CHD2-202ENST00000420239 MYBBP1AQ9BQG0 1328 aaKnown RBP7.96□□□□□ -1.14
CHD2-202ENST00000420239 FXR2P51116 673 aaKnown RBP eCLIP7.95□□□□□ -1.142e-7■■□□□ 11.7
CHD2-202ENST00000420239 CHIC2Q9UKJ5 165 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 WDR62O43379 1518 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 ADGBQ8N7X0 1667 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 KDM2BQ8NHM5 1336 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 ARHGEF12Q9NZN5 1544 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 PLIN1O60240 522 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 TMC1Q8TDI8 760 aa7.95□□□□□ -1.14
CHD2-202ENST00000420239 KIAA1107Q9UPP5 1409 aa7.94□□□□□ -1.14
CHD2-202ENST00000420239 LAMC3Q9Y6N6 1575 aa7.94□□□□□ -1.14
CHD2-202ENST00000420239 RRP9O43818 475 aaKnown RBP7.94□□□□□ -1.14
CHD2-202ENST00000420239 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
CHD2-202ENST00000420239 ADGRL2O95490 1459 aa7.94□□□□□ -1.14
CHD2-202ENST00000420239 PLEKHH2Q8IVE3 1493 aa7.94□□□□□ -1.14
CHD2-202ENST00000420239 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
CHD2-202ENST00000420239 GPIHBP1Q8IV16 184 aa7.93□□□□□ -1.14
CHD2-202ENST00000420239 BLMP54132 1417 aaPredicted RBP7.93□□□□□ -1.14
CHD2-202ENST00000420239 FAM161AQ3B820 660 aa7.93□□□□□ -1.14
CHD2-202ENST00000420239 PODXL2Q9NZ53 605 aa7.93□□□□□ -1.14
CHD2-202ENST00000420239 PARD3Q8TEW0 1356 aa7.92□□□□□ -1.14
CHD2-202ENST00000420239 CDCA7LQ96GN5 454 aa7.92□□□□□ -1.14
CHD2-202ENST00000420239 AK7Q96M32 723 aa7.92□□□□□ -1.14
CHD2-202ENST00000420239 POLR3GLQ9BT43 218 aa7.92□□□□□ -1.14
CHD2-202ENST00000420239 HSP90AA1P07900 732 aaKnown RBP7.91□□□□□ -1.14
CHD2-202ENST00000420239 VIRMAQ69YN4 1812 aaKnown RBP7.91□□□□□ -1.14
CHD2-202ENST00000420239 CROCC2H7BZ55 1655 aa7.91□□□□□ -1.14
CHD2-202ENST00000420239 CLCN1P35523 988 aa7.91□□□□□ -1.14
CHD2-202ENST00000420239 C20orf194Q5TEA3 1177 aa7.91□□□□□ -1.14
CHD2-202ENST00000420239 PHF12Q96QT6 1004 aa7.91□□□□□ -1.14
CHD2-202ENST00000420239 CDK13Q14004 1512 aaKnown RBP7.91□□□□□ -1.14
CHD2-202ENST00000420239 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.14
CHD2-202ENST00000420239 PNNQ9H307 717 aaKnown RBP7.9□□□□□ -1.14
CHD2-202ENST00000420239 KDM5DQ9BY66 1539 aa7.9□□□□□ -1.14
CHD2-202ENST00000420239 NLRP13Q86W25 1043 aa7.9□□□□□ -1.15
CHD2-202ENST00000420239 IQGAP2Q13576 1575 aa7.9□□□□□ -1.15
CHD2-202ENST00000420239 USP19O94966 1318 aa7.89□□□□□ -1.15
CHD2-202ENST00000420239 TMEM106CQ9BVX2 250 aa7.89□□□□□ -1.15
CHD2-202ENST00000420239 KDM4CQ9H3R0 1056 aa7.89□□□□□ -1.15
CHD2-202ENST00000420239 TRPC6Q9Y210 931 aa7.89□□□□□ -1.15
CHD2-202ENST00000420239 CEP170Q5SW79 1584 aa7.89□□□□□ -1.15
CHD2-202ENST00000420239 URB2Q14146 1524 aaKnown RBP7.89□□□□□ -1.15
CHD2-202ENST00000420239 XRCC6P12956 609 aaKnown RBP eCLIP7.88□□□□□ -1.152e-9■■■■■ 28.3
CHD2-202ENST00000420239 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
CHD2-202ENST00000420239 ITSN2Q9NZM3 1697 aa7.88□□□□□ -1.15
CHD2-202ENST00000420239 LAMC1P11047 1609 aa7.88□□□□□ -1.15
CHD2-202ENST00000420239 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
CHD2-202ENST00000420239 GOLGA2Q08379 1002 aa7.88□□□□□ -1.15
CHD2-202ENST00000420239 CENPQQ7L2Z9 268 aaPredicted RBP7.88□□□□□ -1.15
CHD2-202ENST00000420239 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
CHD2-202ENST00000420239 PANK2Q9BZ23 570 aa7.88□□□□□ -1.15
CHD2-202ENST00000420239 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms