RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
SEMA3B-202ENST00000418576 MYO5BQ9ULV0 1848 aa26.84■■□□□ 1.89
SEMA3B-202ENST00000418576 NEUROD1Q13562 356 aa26.84■■□□□ 1.89
SEMA3B-202ENST00000418576 RIMS2Q9UQ26 1411 aa26.83■■□□□ 1.89
SEMA3B-202ENST00000418576 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
SEMA3B-202ENST00000418576 LTKP29376 864 aa26.8■■□□□ 1.88
SEMA3B-202ENST00000418576 NCKAP5LQ9HCH0 1330 aa26.8■■□□□ 1.88
SEMA3B-202ENST00000418576 ZFYVE9O95405 1425 aa26.79■■□□□ 1.88
SEMA3B-202ENST00000418576 SCAF11Q99590 1463 aaKnown RBP26.79■■□□□ 1.88
SEMA3B-202ENST00000418576 VGFO15240 615 aaPredicted RBP26.77■■□□□ 1.88
SEMA3B-202ENST00000418576 NUTM2DQ5VT03 806 aaPredicted RBP26.76■■□□□ 1.88
SEMA3B-202ENST00000418576 DMRT2Q9Y5R5 561 aa26.76■■□□□ 1.88
SEMA3B-202ENST00000418576 NEXMIFQ5QGS0 1516 aa26.75■■□□□ 1.87
SEMA3B-202ENST00000418576 BCANQ96GW7 911 aa26.73■■□□□ 1.87
SEMA3B-202ENST00000418576 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
SEMA3B-202ENST00000418576 STAC3Q96MF2 364 aa26.72■■□□□ 1.87
SEMA3B-202ENST00000418576 MED14O60244 1454 aa26.72■■□□□ 1.87
SEMA3B-202ENST00000418576 STRCQ7RTU9 1775 aa26.72■■□□□ 1.87
SEMA3B-202ENST00000418576 DCAF11Q8TEB1 546 aa26.71■■□□□ 1.87
SEMA3B-202ENST00000418576 NPHP4O75161 1426 aaPredicted RBP26.7■■□□□ 1.87
SEMA3B-202ENST00000418576 PLEKHG1Q9ULL1 1385 aa26.7■■□□□ 1.86
SEMA3B-202ENST00000418576 TONSLQ96HA7 1378 aa26.69■■□□□ 1.86
SEMA3B-202ENST00000418576 PPLO60437 1756 aa26.68■■□□□ 1.86
SEMA3B-202ENST00000418576 L3MBTL2Q969R5 705 aa26.67■■□□□ 1.86
SEMA3B-202ENST00000418576 KDM2AQ9Y2K7 1162 aa26.67■■□□□ 1.86
SEMA3B-202ENST00000418576 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
SEMA3B-202ENST00000418576 IFT172Q9UG01 1749 aa26.64■■□□□ 1.86
SEMA3B-202ENST00000418576 ADGRF5Q8IZF2 1346 aa26.64■■□□□ 1.86
SEMA3B-202ENST00000418576 IQGAP1P46940 1657 aa26.64■■□□□ 1.85
SEMA3B-202ENST00000418576 MYOM2P54296 1465 aa26.64■■□□□ 1.85
SEMA3B-202ENST00000418576 TIMELESSQ9UNS1 1208 aa26.62■■□□□ 1.85
SEMA3B-202ENST00000418576 SLC26A8Q96RN1 970 aa26.61■■□□□ 1.85
SEMA3B-202ENST00000418576 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
SEMA3B-202ENST00000418576 TBX22Q9Y458 520 aa26.58■■□□□ 1.85
SEMA3B-202ENST00000418576 PIK3C2GO75747 1445 aa26.57■■□□□ 1.84
SEMA3B-202ENST00000418576 NRXN1Q9ULB1 1477 aa26.57■■□□□ 1.84
SEMA3B-202ENST00000418576 ADAMTS13Q76LX8 1427 aa26.55■■□□□ 1.84
SEMA3B-202ENST00000418576 DIP2AQ14689 1571 aa26.53■■□□□ 1.84
SEMA3B-202ENST00000418576 NRXN3Q9Y4C0 1643 aa26.52■■□□□ 1.84
SEMA3B-202ENST00000418576 C14orf93Q9H972 538 aaKnown RBP26.51■■□□□ 1.83
SEMA3B-202ENST00000418576 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
SEMA3B-202ENST00000418576 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
SEMA3B-202ENST00000418576 CFAP70Q5T0N1 1121 aa26.48■■□□□ 1.83
SEMA3B-202ENST00000418576 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
SEMA3B-202ENST00000418576 METP08581 1390 aa26.45■■□□□ 1.82
SEMA3B-202ENST00000418576 LAMC1P11047 1609 aa26.44■■□□□ 1.82
SEMA3B-202ENST00000418576 ZNF335Q9H4Z2 1342 aaPredicted RBP26.44■■□□□ 1.82
SEMA3B-202ENST00000418576 KCNA6P17658 529 aa26.43■■□□□ 1.82
SEMA3B-202ENST00000418576 TMEM132EQ6IEE7 984 aa26.41■■□□□ 1.82
SEMA3B-202ENST00000418576 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
SEMA3B-202ENST00000418576 AMOTL2Q9Y2J4 779 aa26.4■■□□□ 1.82
SEMA3B-202ENST00000418576 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
SEMA3B-202ENST00000418576 KIAA1210Q9ULL0 1709 aa26.37■■□□□ 1.81
SEMA3B-202ENST00000418576 PTPRUQ92729 1446 aa26.36■■□□□ 1.81
SEMA3B-202ENST00000418576 CHD2O14647 1828 aaKnown RBP26.36■■□□□ 1.81
SEMA3B-202ENST00000418576 NBPF1Q3BBV0 1214 aa26.35■■□□□ 1.81
SEMA3B-202ENST00000418576 ROCK2O75116 1388 aaKnown RBP26.34■■□□□ 1.81
SEMA3B-202ENST00000418576 STK26Q9P289 416 aa26.34■■□□□ 1.81
SEMA3B-202ENST00000418576 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
SEMA3B-202ENST00000418576 LRPPRCP42704 1394 aaKnown RBP26.34■■□□□ 1.81
SEMA3B-202ENST00000418576 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
SEMA3B-202ENST00000418576 ADGRB1O14514 1584 aa26.33■■□□□ 1.81
SEMA3B-202ENST00000418576 CPS1P31327 1500 aa26.33■■□□□ 1.81
SEMA3B-202ENST00000418576 ASXL1Q8IXJ9 1541 aa26.33■■□□□ 1.81
SEMA3B-202ENST00000418576 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
SEMA3B-202ENST00000418576 TRPM1Q7Z4N2 1603 aa26.32■■□□□ 1.8
SEMA3B-202ENST00000418576 ABCC11Q96J66 1382 aa26.32■■□□□ 1.8
SEMA3B-202ENST00000418576 PROSER2Q86WR7 435 aaPredicted RBP26.3■■□□□ 1.8
SEMA3B-202ENST00000418576 LTBP4Q8N2S1 1624 aa26.29■■□□□ 1.8
SEMA3B-202ENST00000418576 RALGAPBQ86X10 1494 aa26.29■■□□□ 1.8
SEMA3B-202ENST00000418576 XRN1Q8IZH2 1706 aaKnown RBP26.29■■□□□ 1.8
SEMA3B-202ENST00000418576 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
SEMA3B-202ENST00000418576 TRAK1Q9UPV9 953 aa26.28■■□□□ 1.8
SEMA3B-202ENST00000418576 TECPR2O15040 1411 aa26.27■■□□□ 1.8
SEMA3B-202ENST00000418576 CARD11Q9BXL7 1154 aa26.27■■□□□ 1.8
SEMA3B-202ENST00000418576 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
SEMA3B-202ENST00000418576 SIRT1Q96EB6 747 aa26.25■■□□□ 1.79
SEMA3B-202ENST00000418576 GPRASP1Q5JY77 1395 aa26.25■■□□□ 1.79
SEMA3B-202ENST00000418576 ROBO2Q9HCK4 1378 aa26.24■■□□□ 1.79
SEMA3B-202ENST00000418576 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
SEMA3B-202ENST00000418576 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
SEMA3B-202ENST00000418576 ZEB1P37275 1124 aaPredicted RBP26.22■■□□□ 1.79
SEMA3B-202ENST00000418576 KNDC1Q76NI1 1749 aa26.22■■□□□ 1.79
SEMA3B-202ENST00000418576 FAM135BQ49AJ0 1406 aa26.22■■□□□ 1.79
SEMA3B-202ENST00000418576 POGKQ9P215 609 aa26.21■■□□□ 1.79
SEMA3B-202ENST00000418576 DLC1Q96QB1 1528 aa26.21■■□□□ 1.79
SEMA3B-202ENST00000418576 C14orf37Q86TY3 774 aa26.2■■□□□ 1.79
SEMA3B-202ENST00000418576 RBM33Q96EV2 1170 aaKnown RBP26.2■■□□□ 1.79
SEMA3B-202ENST00000418576 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.79
SEMA3B-202ENST00000418576 WAPLQ7Z5K2 1190 aa26.2■■□□□ 1.78
SEMA3B-202ENST00000418576 PRAM1Q96QH2 718 aa26.2■■□□□ 1.78
SEMA3B-202ENST00000418576 CERKQ8TCT0 537 aa26.18■■□□□ 1.78
SEMA3B-202ENST00000418576 EIF3AQ14152 1382 aaKnown RBP26.18■■□□□ 1.78
SEMA3B-202ENST00000418576 SAFB2Q14151 953 aaKnown RBP eCLIP26.14■■□□□ 1.78
SEMA3B-202ENST00000418576 C19orf44Q9H6X5 657 aa26.14■■□□□ 1.78
SEMA3B-202ENST00000418576 PLEKHH1Q9ULM0 1364 aa26.14■■□□□ 1.77
SEMA3B-202ENST00000418576 MSH6P52701 1360 aa26.13■■□□□ 1.77
SEMA3B-202ENST00000418576 IQSEC2Q5JU85 1478 aa26.12■■□□□ 1.77
SEMA3B-202ENST00000418576 CENPJQ9HC77 1338 aaPredicted RBP26.12■■□□□ 1.77
SEMA3B-202ENST00000418576 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms