RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
NUP50-204ENST00000417702 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
NUP50-204ENST00000417702 MYO5BQ9ULV0 1848 aa22.94■■□□□ 1.26
NUP50-204ENST00000417702 PLEKHG1Q9ULL1 1385 aa22.93■■□□□ 1.26
NUP50-204ENST00000417702 LRRC7Q96NW7 1537 aa22.92■■□□□ 1.26
NUP50-204ENST00000417702 KCNA6P17658 529 aa22.92■■□□□ 1.26
NUP50-204ENST00000417702 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
NUP50-204ENST00000417702 STRCP1A6NGW2 1772 aa22.91■■□□□ 1.26
NUP50-204ENST00000417702 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
NUP50-204ENST00000417702 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
NUP50-204ENST00000417702 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
NUP50-204ENST00000417702 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
NUP50-204ENST00000417702 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
NUP50-204ENST00000417702 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
NUP50-204ENST00000417702 TRPM2O94759 1503 aa22.86■■□□□ 1.25
NUP50-204ENST00000417702 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
NUP50-204ENST00000417702 PROSER2Q86WR7 435 aaPredicted RBP22.84■■□□□ 1.25
NUP50-204ENST00000417702 TMEM94Q12767 1356 aa22.81■■□□□ 1.24
NUP50-204ENST00000417702 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
NUP50-204ENST00000417702 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
NUP50-204ENST00000417702 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
NUP50-204ENST00000417702 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
NUP50-204ENST00000417702 ADAMTS13Q76LX8 1427 aa22.79■■□□□ 1.24
NUP50-204ENST00000417702 FOXD1Q16676 465 aa22.78■■□□□ 1.24
NUP50-204ENST00000417702 NWD1Q149M9 1564 aa22.77■■□□□ 1.24
NUP50-204ENST00000417702 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
NUP50-204ENST00000417702 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
NUP50-204ENST00000417702 HSPA1LP34931 641 aa22.76■■□□□ 1.23
NUP50-204ENST00000417702 RBM33Q96EV2 1170 aaKnown RBP22.76■■□□□ 1.23
NUP50-204ENST00000417702 KIF1BO60333 1816 aa22.75■■□□□ 1.23
NUP50-204ENST00000417702 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
NUP50-204ENST00000417702 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
NUP50-204ENST00000417702 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
NUP50-204ENST00000417702 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
NUP50-204ENST00000417702 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
NUP50-204ENST00000417702 MSH6P52701 1360 aa22.71■■□□□ 1.23
NUP50-204ENST00000417702 RAB3GAP2Q9H2M9 1393 aa22.71■■□□□ 1.23
NUP50-204ENST00000417702 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
NUP50-204ENST00000417702 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
NUP50-204ENST00000417702 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
NUP50-204ENST00000417702 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
NUP50-204ENST00000417702 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
NUP50-204ENST00000417702 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
NUP50-204ENST00000417702 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
NUP50-204ENST00000417702 NRXN3Q9Y4C0 1643 aa22.65■■□□□ 1.22
NUP50-204ENST00000417702 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
NUP50-204ENST00000417702 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
NUP50-204ENST00000417702 METP08581 1390 aa22.63■■□□□ 1.21
NUP50-204ENST00000417702 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
NUP50-204ENST00000417702 HRCP23327 699 aa22.61■■□□□ 1.21
NUP50-204ENST00000417702 C19orf44Q9H6X5 657 aa22.61■■□□□ 1.21
NUP50-204ENST00000417702 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
NUP50-204ENST00000417702 ATF3P18847 181 aa22.59■■□□□ 1.21
NUP50-204ENST00000417702 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
NUP50-204ENST00000417702 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
NUP50-204ENST00000417702 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
NUP50-204ENST00000417702 PPLO60437 1756 aa22.56■■□□□ 1.2
NUP50-204ENST00000417702 XRN1Q8IZH2 1706 aaKnown RBP22.56■■□□□ 1.2
NUP50-204ENST00000417702 ADGRF5Q8IZF2 1346 aa22.54■■□□□ 1.2
NUP50-204ENST00000417702 ROBO1Q9Y6N7 1651 aa22.52■■□□□ 1.2
NUP50-204ENST00000417702 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
NUP50-204ENST00000417702 DCCP43146 1447 aa22.49■■□□□ 1.19
NUP50-204ENST00000417702 PTCH1Q13635 1447 aa22.48■■□□□ 1.19
NUP50-204ENST00000417702 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
NUP50-204ENST00000417702 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
NUP50-204ENST00000417702 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
NUP50-204ENST00000417702 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
NUP50-204ENST00000417702 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
NUP50-204ENST00000417702 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
NUP50-204ENST00000417702 PIK3C2GO75747 1445 aa22.43■■□□□ 1.18
NUP50-204ENST00000417702 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
NUP50-204ENST00000417702 ILDR2Q71H61 639 aa22.43■■□□□ 1.18
NUP50-204ENST00000417702 STK26Q9P289 416 aa22.42■■□□□ 1.18
NUP50-204ENST00000417702 BRINP3Q76B58 766 aa22.41■■□□□ 1.18
NUP50-204ENST00000417702 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
NUP50-204ENST00000417702 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
NUP50-204ENST00000417702 MYOM2P54296 1465 aa22.4■■□□□ 1.18
NUP50-204ENST00000417702 MST1RQ04912 1400 aa22.4■■□□□ 1.18
NUP50-204ENST00000417702 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
NUP50-204ENST00000417702 PHLPP1O60346 1717 aa22.39■■□□□ 1.17
NUP50-204ENST00000417702 JCADQ9P266 1359 aa22.38■■□□□ 1.17
NUP50-204ENST00000417702 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
NUP50-204ENST00000417702 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
NUP50-204ENST00000417702 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
NUP50-204ENST00000417702 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
NUP50-204ENST00000417702 TECPR2O15040 1411 aa22.35■■□□□ 1.17
NUP50-204ENST00000417702 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
NUP50-204ENST00000417702 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
NUP50-204ENST00000417702 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
NUP50-204ENST00000417702 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
NUP50-204ENST00000417702 AHDC1Q5TGY3 1603 aaPredicted RBP22.34■■□□□ 1.17
NUP50-204ENST00000417702 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
NUP50-204ENST00000417702 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
NUP50-204ENST00000417702 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
NUP50-204ENST00000417702 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
NUP50-204ENST00000417702 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
NUP50-204ENST00000417702 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
NUP50-204ENST00000417702 LAMC1P11047 1609 aa22.3■■□□□ 1.16
NUP50-204ENST00000417702 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
NUP50-204ENST00000417702 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms