RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
MECP2-204ENST00000415944 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
MECP2-204ENST00000415944 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
MECP2-204ENST00000415944 SLIT1O75093 1534 aa12.02□□□□□ -0.48
MECP2-204ENST00000415944 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.49
MECP2-204ENST00000415944 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
MECP2-204ENST00000415944 DDX10Q13206 875 aaKnown RBP12.01□□□□□ -0.49
MECP2-204ENST00000415944 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
MECP2-204ENST00000415944 STRCQ7RTU9 1775 aa12□□□□□ -0.49
MECP2-204ENST00000415944 SPATA31E1Q6ZUB1 1445 aa11.99□□□□□ -0.49
MECP2-204ENST00000415944 IFT172Q9UG01 1749 aa11.99□□□□□ -0.49
MECP2-204ENST00000415944 PPLO60437 1756 aa11.98□□□□□ -0.49
MECP2-204ENST00000415944 ZFYVE9O95405 1425 aa11.98□□□□□ -0.49
MECP2-204ENST00000415944 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
MECP2-204ENST00000415944 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
MECP2-204ENST00000415944 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
MECP2-204ENST00000415944 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
MECP2-204ENST00000415944 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
MECP2-204ENST00000415944 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
MECP2-204ENST00000415944 RALGAPBQ86X10 1494 aa11.96□□□□□ -0.49
MECP2-204ENST00000415944 HSPA2P54652 639 aa11.96□□□□□ -0.49
MECP2-204ENST00000415944 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
MECP2-204ENST00000415944 MED14O60244 1454 aa11.95□□□□□ -0.5
MECP2-204ENST00000415944 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
MECP2-204ENST00000415944 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
MECP2-204ENST00000415944 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
MECP2-204ENST00000415944 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
MECP2-204ENST00000415944 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
MECP2-204ENST00000415944 IQGAP1P46940 1657 aa11.93□□□□□ -0.5
MECP2-204ENST00000415944 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
MECP2-204ENST00000415944 MYOM2P54296 1465 aa11.91□□□□□ -0.5
MECP2-204ENST00000415944 NRXN3Q9Y4C0 1643 aa11.91□□□□□ -0.5
MECP2-204ENST00000415944 LTKP29376 864 aa11.91□□□□□ -0.5
MECP2-204ENST00000415944 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
MECP2-204ENST00000415944 LAMC1P11047 1609 aa11.9□□□□□ -0.5
MECP2-204ENST00000415944 NPHP4O75161 1426 aaPredicted RBP11.9□□□□□ -0.5
MECP2-204ENST00000415944 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
MECP2-204ENST00000415944 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
MECP2-204ENST00000415944 SETBP1Q9Y6X0 1596 aa11.9□□□□□ -0.5
MECP2-204ENST00000415944 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
MECP2-204ENST00000415944 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 ZNF326Q5BKZ1 582 aaKnown RBP11.89□□□□□ -0.51
MECP2-204ENST00000415944 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 USP47Q96K76 1375 aa11.89□□□□□ -0.51
MECP2-204ENST00000415944 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
MECP2-204ENST00000415944 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
MECP2-204ENST00000415944 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
MECP2-204ENST00000415944 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
MECP2-204ENST00000415944 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
MECP2-204ENST00000415944 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
MECP2-204ENST00000415944 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
MECP2-204ENST00000415944 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
MECP2-204ENST00000415944 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
MECP2-204ENST00000415944 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
MECP2-204ENST00000415944 NEFLP07196 543 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 NUTM2DQ5VT03 806 aaPredicted RBP11.84□□□□□ -0.51
MECP2-204ENST00000415944 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
MECP2-204ENST00000415944 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 KIF7Q2M1P5 1343 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
MECP2-204ENST00000415944 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.51
MECP2-204ENST00000415944 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
MECP2-204ENST00000415944 ALKQ9UM73 1620 aa11.83□□□□□ -0.52
MECP2-204ENST00000415944 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
MECP2-204ENST00000415944 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
MECP2-204ENST00000415944 RALBP1Q15311 655 aa11.81□□□□□ -0.52
MECP2-204ENST00000415944 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
MECP2-204ENST00000415944 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
MECP2-204ENST00000415944 INSRP06213 1382 aa11.8□□□□□ -0.52
MECP2-204ENST00000415944 PIK3R4Q99570 1358 aa11.8□□□□□ -0.52
MECP2-204ENST00000415944 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
MECP2-204ENST00000415944 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
MECP2-204ENST00000415944 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
MECP2-204ENST00000415944 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
MECP2-204ENST00000415944 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
MECP2-204ENST00000415944 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
MECP2-204ENST00000415944 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
MECP2-204ENST00000415944 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
MECP2-204ENST00000415944 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
MECP2-204ENST00000415944 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
MECP2-204ENST00000415944 C14orf93Q9H972 538 aaKnown RBP11.77□□□□□ -0.53
MECP2-204ENST00000415944 METP08581 1390 aa11.77□□□□□ -0.53
MECP2-204ENST00000415944 PTPRUQ92729 1446 aa11.77□□□□□ -0.53
MECP2-204ENST00000415944 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
MECP2-204ENST00000415944 BCANQ96GW7 911 aa11.76□□□□□ -0.53
MECP2-204ENST00000415944 CPS1P31327 1500 aa11.76□□□□□ -0.53
MECP2-204ENST00000415944 TMF1P82094 1093 aa11.75□□□□□ -0.53
MECP2-204ENST00000415944 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
MECP2-204ENST00000415944 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
MECP2-204ENST00000415944 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
MECP2-204ENST00000415944 BRD4O60885 1362 aaPredicted RBP11.75□□□□□ -0.53
MECP2-204ENST00000415944 XIRP1Q702N8 1843 aaKnown RBP11.74□□□□□ -0.53
MECP2-204ENST00000415944 KCNA6P17658 529 aa11.74□□□□□ -0.53
MECP2-204ENST00000415944 CFAP70Q5T0N1 1121 aa11.74□□□□□ -0.53
MECP2-204ENST00000415944 TECPR2O15040 1411 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms