RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 DCAF11Q8TEB1 546 aa18.28■□□□□ 0.52
HNF4A-204ENST00000415691 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
HNF4A-204ENST00000415691 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.51
HNF4A-204ENST00000415691 PIK3C2BO00750 1634 aa18.27■□□□□ 0.51
HNF4A-204ENST00000415691 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
HNF4A-204ENST00000415691 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
HNF4A-204ENST00000415691 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
HNF4A-204ENST00000415691 KIF1BO60333 1816 aa18.21■□□□□ 0.51
HNF4A-204ENST00000415691 ADGRB3O60242 1522 aa18.21■□□□□ 0.51
HNF4A-204ENST00000415691 TMEM131LA2VDJ0 1609 aa18.2■□□□□ 0.5
HNF4A-204ENST00000415691 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
HNF4A-204ENST00000415691 A2ML1A8K2U0 1454 aa18.18■□□□□ 0.5
HNF4A-204ENST00000415691 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
HNF4A-204ENST00000415691 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
HNF4A-204ENST00000415691 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
HNF4A-204ENST00000415691 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
HNF4A-204ENST00000415691 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
HNF4A-204ENST00000415691 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
HNF4A-204ENST00000415691 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
HNF4A-204ENST00000415691 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
HNF4A-204ENST00000415691 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
HNF4A-204ENST00000415691 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
HNF4A-204ENST00000415691 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
HNF4A-204ENST00000415691 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
HNF4A-204ENST00000415691 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
HNF4A-204ENST00000415691 LTKP29376 864 aa18.11■□□□□ 0.49
HNF4A-204ENST00000415691 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
HNF4A-204ENST00000415691 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
HNF4A-204ENST00000415691 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
HNF4A-204ENST00000415691 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
HNF4A-204ENST00000415691 UHRF1BP1Q6BDS2 1440 aa18.1■□□□□ 0.49
HNF4A-204ENST00000415691 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
HNF4A-204ENST00000415691 ANP32CO43423 234 aa18.1■□□□□ 0.49
HNF4A-204ENST00000415691 NBPF1Q3BBV0 1214 aa18.1■□□□□ 0.49
HNF4A-204ENST00000415691 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
HNF4A-204ENST00000415691 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
HNF4A-204ENST00000415691 PPLO60437 1756 aa18.08■□□□□ 0.48
HNF4A-204ENST00000415691 CFAP70Q5T0N1 1121 aa18.08■□□□□ 0.48
HNF4A-204ENST00000415691 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
HNF4A-204ENST00000415691 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
HNF4A-204ENST00000415691 MYOM2P54296 1465 aa18.07■□□□□ 0.48
HNF4A-204ENST00000415691 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
HNF4A-204ENST00000415691 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
HNF4A-204ENST00000415691 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
HNF4A-204ENST00000415691 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
HNF4A-204ENST00000415691 HSPA2P54652 639 aa18.04■□□□□ 0.48
HNF4A-204ENST00000415691 EID1Q9Y6B2 187 aa18.04■□□□□ 0.48
HNF4A-204ENST00000415691 ARHGAP23Q9P227 1491 aa18.03■□□□□ 0.48
HNF4A-204ENST00000415691 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
HNF4A-204ENST00000415691 C14orf93Q9H972 538 aaKnown RBP18.03■□□□□ 0.48
HNF4A-204ENST00000415691 ZNF142P52746 1687 aaPredicted RBP18.02■□□□□ 0.48
HNF4A-204ENST00000415691 TMEM132EQ6IEE7 984 aa18.02■□□□□ 0.48
HNF4A-204ENST00000415691 SLIT1O75093 1534 aa18.02■□□□□ 0.48
HNF4A-204ENST00000415691 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
HNF4A-204ENST00000415691 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
HNF4A-204ENST00000415691 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
HNF4A-204ENST00000415691 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
HNF4A-204ENST00000415691 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
HNF4A-204ENST00000415691 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
HNF4A-204ENST00000415691 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
HNF4A-204ENST00000415691 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
HNF4A-204ENST00000415691 PPP4R2Q9NY27 417 aa17.98■□□□□ 0.47
HNF4A-204ENST00000415691 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
HNF4A-204ENST00000415691 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
HNF4A-204ENST00000415691 PLEKHG1Q9ULL1 1385 aa17.96■□□□□ 0.47
HNF4A-204ENST00000415691 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
HNF4A-204ENST00000415691 GPRASP1Q5JY77 1395 aa17.94■□□□□ 0.46
HNF4A-204ENST00000415691 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
HNF4A-204ENST00000415691 NRXN3Q9Y4C0 1643 aa17.93■□□□□ 0.46
HNF4A-204ENST00000415691 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
HNF4A-204ENST00000415691 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
HNF4A-204ENST00000415691 STK26Q9P289 416 aa17.93■□□□□ 0.46
HNF4A-204ENST00000415691 NOP58Q9Y2X3 529 aaKnown RBP17.93■□□□□ 0.46
HNF4A-204ENST00000415691 METP08581 1390 aa17.92■□□□□ 0.46
HNF4A-204ENST00000415691 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
HNF4A-204ENST00000415691 USP47Q96K76 1375 aa17.9■□□□□ 0.46
HNF4A-204ENST00000415691 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
HNF4A-204ENST00000415691 SETBP1Q9Y6X0 1596 aa17.9■□□□□ 0.46
HNF4A-204ENST00000415691 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
HNF4A-204ENST00000415691 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
HNF4A-204ENST00000415691 ASXL1Q8IXJ9 1541 aa17.89■□□□□ 0.46
HNF4A-204ENST00000415691 ST20-MTHFSA0A0A6YYL1 179 aa17.89■□□□□ 0.46
HNF4A-204ENST00000415691 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
HNF4A-204ENST00000415691 MED14O60244 1454 aa17.88■□□□□ 0.45
HNF4A-204ENST00000415691 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-204ENST00000415691 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
HNF4A-204ENST00000415691 YTHDC2Q9H6S0 1430 aaKnown RBP17.86■□□□□ 0.45
HNF4A-204ENST00000415691 SETD1AO15047 1707 aaKnown RBP17.85■□□□□ 0.45
HNF4A-204ENST00000415691 LAMC1P11047 1609 aa17.84■□□□□ 0.45
HNF4A-204ENST00000415691 PTPRUQ92729 1446 aa17.84■□□□□ 0.45
HNF4A-204ENST00000415691 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
HNF4A-204ENST00000415691 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.45
HNF4A-204ENST00000415691 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
HNF4A-204ENST00000415691 SAFB2Q14151 953 aaKnown RBP eCLIP17.83■□□□□ 0.44
HNF4A-204ENST00000415691 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
HNF4A-204ENST00000415691 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
HNF4A-204ENST00000415691 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
HNF4A-204ENST00000415691 WAPLQ7Z5K2 1190 aa17.82■□□□□ 0.44
HNF4A-204ENST00000415691 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
HNF4A-204ENST00000415691 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms