RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CDC42BPGQ6DT37 1551 aa10.54□□□□□ -0.72
LMBR1-204ENST00000415428 TNS1Q9HBL0 1735 aaKnown RBP10.54□□□□□ -0.72
LMBR1-204ENST00000415428 KCNA6P17658 529 aa10.54□□□□□ -0.72
LMBR1-204ENST00000415428 ATRNO75882 1429 aa10.53□□□□□ -0.72
LMBR1-204ENST00000415428 ADAMTS13Q76LX8 1427 aa10.53□□□□□ -0.72
LMBR1-204ENST00000415428 BCL9LQ86UU0 1499 aa10.53□□□□□ -0.72
LMBR1-204ENST00000415428 DISP2A7MBM2 1401 aa10.52□□□□□ -0.72
LMBR1-204ENST00000415428 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
LMBR1-204ENST00000415428 THSD7AQ9UPZ6 1657 aa10.5□□□□□ -0.73
LMBR1-204ENST00000415428 RGS12O14924 1447 aa10.5□□□□□ -0.73
LMBR1-204ENST00000415428 MST1RQ04912 1400 aa10.5□□□□□ -0.73
LMBR1-204ENST00000415428 POTEAQ6S8J7 498 aa10.49□□□□□ -0.73
LMBR1-204ENST00000415428 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
LMBR1-204ENST00000415428 MYOM2P54296 1465 aa10.48□□□□□ -0.73
LMBR1-204ENST00000415428 QSER1Q2KHR3 1735 aa10.46□□□□□ -0.73
LMBR1-204ENST00000415428 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.73
LMBR1-204ENST00000415428 ADGRB2O60241 1585 aa10.46□□□□□ -0.74
LMBR1-204ENST00000415428 PPLO60437 1756 aa10.46□□□□□ -0.74
LMBR1-204ENST00000415428 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.74
LMBR1-204ENST00000415428 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.74
LMBR1-204ENST00000415428 PLCH1Q4KWH8 1693 aa10.46□□□□□ -0.74
LMBR1-204ENST00000415428 ZNF772Q68DY9 489 aaPredicted RBP10.45□□□□□ -0.74
LMBR1-204ENST00000415428 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
LMBR1-204ENST00000415428 ABCC5O15440 1437 aa10.45□□□□□ -0.74
LMBR1-204ENST00000415428 MLECQ14165 292 aa10.44□□□□□ -0.74
LMBR1-204ENST00000415428 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
LMBR1-204ENST00000415428 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
LMBR1-204ENST00000415428 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
LMBR1-204ENST00000415428 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
LMBR1-204ENST00000415428 GLI3P10071 1580 aa10.43□□□□□ -0.74
LMBR1-204ENST00000415428 TECPR2O15040 1411 aa10.42□□□□□ -0.74
LMBR1-204ENST00000415428 DAPK1P53355 1430 aa10.42□□□□□ -0.74
LMBR1-204ENST00000415428 TBX22Q9Y458 520 aa10.42□□□□□ -0.74
LMBR1-204ENST00000415428 PXDNQ92626 1479 aa10.42□□□□□ -0.74
LMBR1-204ENST00000415428 WNK3Q9BYP7 1800 aa10.41□□□□□ -0.74
LMBR1-204ENST00000415428 CASZ1Q86V15 1759 aa10.41□□□□□ -0.74
LMBR1-204ENST00000415428 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
LMBR1-204ENST00000415428 RALGAPBQ86X10 1494 aa10.41□□□□□ -0.74
LMBR1-204ENST00000415428 ROCK1Q13464 1354 aa10.4□□□□□ -0.74
LMBR1-204ENST00000415428 NUP188Q5SRE5 1749 aa10.4□□□□□ -0.74
LMBR1-204ENST00000415428 ALS2Q96Q42 1657 aa10.4□□□□□ -0.75
LMBR1-204ENST00000415428 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
LMBR1-204ENST00000415428 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
LMBR1-204ENST00000415428 MSH6P52701 1360 aa10.39□□□□□ -0.75
LMBR1-204ENST00000415428 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
LMBR1-204ENST00000415428 SLIT2O94813 1529 aa10.39□□□□□ -0.75
LMBR1-204ENST00000415428 LTKP29376 864 aa10.38□□□□□ -0.75
LMBR1-204ENST00000415428 HNRNPMP52272 730 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■■■■ 29.3
LMBR1-204ENST00000415428 PTPRUQ92729 1446 aa10.38□□□□□ -0.75
LMBR1-204ENST00000415428 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
LMBR1-204ENST00000415428 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
LMBR1-204ENST00000415428 KIF1BO60333 1816 aa10.37□□□□□ -0.75
LMBR1-204ENST00000415428 VPS8Q8N3P4 1428 aa10.36□□□□□ -0.75
LMBR1-204ENST00000415428 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
LMBR1-204ENST00000415428 USP54Q70EL1 1684 aa10.36□□□□□ -0.75
LMBR1-204ENST00000415428 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
LMBR1-204ENST00000415428 PEAK1Q9H792 1746 aa10.35□□□□□ -0.75
LMBR1-204ENST00000415428 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
LMBR1-204ENST00000415428 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
LMBR1-204ENST00000415428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
LMBR1-204ENST00000415428 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
LMBR1-204ENST00000415428 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
LMBR1-204ENST00000415428 FOXD1Q16676 465 aa10.33□□□□□ -0.76
LMBR1-204ENST00000415428 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
LMBR1-204ENST00000415428 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
LMBR1-204ENST00000415428 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
LMBR1-204ENST00000415428 PARP4Q9UKK3 1724 aaKnown RBP10.32□□□□□ -0.76
LMBR1-204ENST00000415428 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
LMBR1-204ENST00000415428 NRXN1Q9ULB1 1477 aa10.31□□□□□ -0.76
LMBR1-204ENST00000415428 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
LMBR1-204ENST00000415428 KIF15Q9NS87 1388 aa10.3□□□□□ -0.76
LMBR1-204ENST00000415428 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-204ENST00000415428 ONECUT3O60422 494 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-204ENST00000415428 TOPAZ1Q8N9V7 1692 aa10.29□□□□□ -0.76
LMBR1-204ENST00000415428 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
LMBR1-204ENST00000415428 RRBP1Q9P2E9 1410 aaKnown RBP10.29□□□□□ -0.76
LMBR1-204ENST00000415428 KANK1Q14678 1352 aa10.28□□□□□ -0.76
LMBR1-204ENST00000415428 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
LMBR1-204ENST00000415428 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
LMBR1-204ENST00000415428 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
LMBR1-204ENST00000415428 C1orf167Q5SNV9 1468 aa10.28□□□□□ -0.76
LMBR1-204ENST00000415428 ABCC6O95255 1503 aa10.27□□□□□ -0.77
LMBR1-204ENST00000415428 KIF3BO15066 747 aa10.27□□□□□ -0.77
LMBR1-204ENST00000415428 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
LMBR1-204ENST00000415428 ZNF644Q9H582 1327 aaPredicted RBP10.26□□□□□ -0.77
LMBR1-204ENST00000415428 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
LMBR1-204ENST00000415428 RBM6P78332 1123 aaKnown RBP10.26□□□□□ -0.77
LMBR1-204ENST00000415428 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
LMBR1-204ENST00000415428 BCL9O00512 1426 aa10.25□□□□□ -0.77
LMBR1-204ENST00000415428 PHRF1Q9P1Y6 1649 aaKnown RBP10.25□□□□□ -0.77
LMBR1-204ENST00000415428 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
LMBR1-204ENST00000415428 C19orf44Q9H6X5 657 aa10.24□□□□□ -0.77
LMBR1-204ENST00000415428 ITSN1Q15811 1721 aa10.23□□□□□ -0.77
LMBR1-204ENST00000415428 PAPPAQ13219 1627 aa10.23□□□□□ -0.77
LMBR1-204ENST00000415428 ANKRD30AQ9BXX3 1397 aa10.23□□□□□ -0.77
LMBR1-204ENST00000415428 GGT6Q6P531 493 aa10.23□□□□□ -0.77
LMBR1-204ENST00000415428 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
LMBR1-204ENST00000415428 SBF2Q86WG5 1849 aa10.22□□□□□ -0.77
LMBR1-204ENST00000415428 RXRBP28702 533 aa10.22□□□□□ -0.77
LMBR1-204ENST00000415428 SIRT1Q96EB6 747 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms