RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 WASHC2CQ9Y4E1 1318 aa20.98■□□□□ 0.95
LRCH3-202ENST00000414675 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
LRCH3-202ENST00000414675 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.95
LRCH3-202ENST00000414675 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
LRCH3-202ENST00000414675 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
LRCH3-202ENST00000414675 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
LRCH3-202ENST00000414675 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
LRCH3-202ENST00000414675 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
LRCH3-202ENST00000414675 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
LRCH3-202ENST00000414675 RALBP1Q15311 655 aa20.94■□□□□ 0.94
LRCH3-202ENST00000414675 PNISRQ8TF01 805 aaKnown RBP20.94■□□□□ 0.94
LRCH3-202ENST00000414675 BCANQ96GW7 911 aa20.93■□□□□ 0.94
LRCH3-202ENST00000414675 PANK3Q9H999 370 aa20.93■□□□□ 0.94
LRCH3-202ENST00000414675 NOS1P29475 1434 aa20.93■□□□□ 0.94
LRCH3-202ENST00000414675 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
LRCH3-202ENST00000414675 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
LRCH3-202ENST00000414675 PPLO60437 1756 aa20.92■□□□□ 0.94
LRCH3-202ENST00000414675 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
LRCH3-202ENST00000414675 SYNMO15061 1565 aa20.91■□□□□ 0.94
LRCH3-202ENST00000414675 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
LRCH3-202ENST00000414675 NEFLP07196 543 aa20.9■□□□□ 0.94
LRCH3-202ENST00000414675 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.94
LRCH3-202ENST00000414675 PIK3C2BO00750 1634 aa20.88■□□□□ 0.93
LRCH3-202ENST00000414675 ZC3H13Q5T200 1668 aaKnown RBP20.87■□□□□ 0.93
LRCH3-202ENST00000414675 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
LRCH3-202ENST00000414675 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
LRCH3-202ENST00000414675 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
LRCH3-202ENST00000414675 MYOM1P52179 1685 aa20.86■□□□□ 0.93
LRCH3-202ENST00000414675 ARHGAP31Q2M1Z3 1444 aa20.85■□□□□ 0.93
LRCH3-202ENST00000414675 PIK3C2GO75747 1445 aa20.84■□□□□ 0.93
LRCH3-202ENST00000414675 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
LRCH3-202ENST00000414675 NLRP13Q86W25 1043 aa20.83■□□□□ 0.93
LRCH3-202ENST00000414675 SETBP1Q9Y6X0 1596 aa20.82■□□□□ 0.92
LRCH3-202ENST00000414675 ERVK-7P63135 1459 aa20.81■□□□□ 0.92
LRCH3-202ENST00000414675 KDM5AP29375 1690 aaKnown RBP20.81■□□□□ 0.92
LRCH3-202ENST00000414675 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
LRCH3-202ENST00000414675 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
LRCH3-202ENST00000414675 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
LRCH3-202ENST00000414675 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
LRCH3-202ENST00000414675 C14orf93Q9H972 538 aaKnown RBP20.79■□□□□ 0.92
LRCH3-202ENST00000414675 NEXMIFQ5QGS0 1516 aa20.79■□□□□ 0.92
LRCH3-202ENST00000414675 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
LRCH3-202ENST00000414675 IRX6P78412 446 aaPredicted RBP20.79■□□□□ 0.92
LRCH3-202ENST00000414675 IDI1Q13907 227 aa20.78■□□□□ 0.92
LRCH3-202ENST00000414675 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
LRCH3-202ENST00000414675 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
LRCH3-202ENST00000414675 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
LRCH3-202ENST00000414675 TMEM132EQ6IEE7 984 aa20.75■□□□□ 0.91
LRCH3-202ENST00000414675 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
LRCH3-202ENST00000414675 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
LRCH3-202ENST00000414675 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
LRCH3-202ENST00000414675 DNAJC5Q9H3Z4 198 aa20.74■□□□□ 0.91
LRCH3-202ENST00000414675 REREQ9P2R6 1566 aa20.73■□□□□ 0.91
LRCH3-202ENST00000414675 SBNO2Q9Y2G9 1366 aa20.73■□□□□ 0.91
LRCH3-202ENST00000414675 CENPJQ9HC77 1338 aaPredicted RBP20.72■□□□□ 0.91
LRCH3-202ENST00000414675 QRICH2Q9H0J4 1663 aa20.72■□□□□ 0.91
LRCH3-202ENST00000414675 ASXL1Q8IXJ9 1541 aa20.72■□□□□ 0.91
LRCH3-202ENST00000414675 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
LRCH3-202ENST00000414675 TMEM131LA2VDJ0 1609 aa20.72■□□□□ 0.91
LRCH3-202ENST00000414675 SLC52A1Q9NWF4 448 aa20.71■□□□□ 0.91
LRCH3-202ENST00000414675 AGLP35573 1532 aa20.71■□□□□ 0.91
LRCH3-202ENST00000414675 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
LRCH3-202ENST00000414675 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
LRCH3-202ENST00000414675 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
LRCH3-202ENST00000414675 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
LRCH3-202ENST00000414675 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
LRCH3-202ENST00000414675 ARHGEF28Q8N1W1 1705 aaKnown RBP20.66■□□□□ 0.9
LRCH3-202ENST00000414675 CARD14Q9BXL6 1004 aa20.66■□□□□ 0.9
LRCH3-202ENST00000414675 ZFYVE9O95405 1425 aa20.65■□□□□ 0.9
LRCH3-202ENST00000414675 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
LRCH3-202ENST00000414675 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
LRCH3-202ENST00000414675 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.89
LRCH3-202ENST00000414675 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
LRCH3-202ENST00000414675 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-202ENST00000414675 MLECQ14165 292 aa20.61■□□□□ 0.89
LRCH3-202ENST00000414675 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
LRCH3-202ENST00000414675 INSRP06213 1382 aa20.61■□□□□ 0.89
LRCH3-202ENST00000414675 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
LRCH3-202ENST00000414675 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
LRCH3-202ENST00000414675 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.89
LRCH3-202ENST00000414675 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.89
LRCH3-202ENST00000414675 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.88
LRCH3-202ENST00000414675 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.88
LRCH3-202ENST00000414675 SPATA31D1Q6ZQQ2 1576 aa20.57■□□□□ 0.88
LRCH3-202ENST00000414675 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
LRCH3-202ENST00000414675 STK26Q9P289 416 aa20.55■□□□□ 0.88
LRCH3-202ENST00000414675 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
LRCH3-202ENST00000414675 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
LRCH3-202ENST00000414675 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
LRCH3-202ENST00000414675 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
LRCH3-202ENST00000414675 CDCA7LQ96GN5 454 aa20.52■□□□□ 0.88
LRCH3-202ENST00000414675 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
LRCH3-202ENST00000414675 ALKQ9UM73 1620 aa20.52■□□□□ 0.88
LRCH3-202ENST00000414675 PTPRMP28827 1452 aa20.52■□□□□ 0.88
LRCH3-202ENST00000414675 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
LRCH3-202ENST00000414675 PDE3BQ13370 1112 aa20.5■□□□□ 0.87
LRCH3-202ENST00000414675 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
LRCH3-202ENST00000414675 YTHDC2Q9H6S0 1430 aaKnown RBP20.5■□□□□ 0.87
LRCH3-202ENST00000414675 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
LRCH3-202ENST00000414675 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 435.1 ms