RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CDK11AQ9UQ88 783 aaPredicted RBP7.72□□□□□ -1.17
VPS41-205ENST00000414632 FANCAO15360 1455 aa7.72□□□□□ -1.17
VPS41-205ENST00000414632 ARHGAP5Q13017 1502 aa7.72□□□□□ -1.17
VPS41-205ENST00000414632 TIAM1Q13009 1591 aa7.71□□□□□ -1.17
VPS41-205ENST00000414632 NEO1Q92859 1461 aa7.71□□□□□ -1.18
VPS41-205ENST00000414632 IL27Q8NEV9 243 aa7.71□□□□□ -1.18
VPS41-205ENST00000414632 EHBP1L1Q8N3D4 1523 aa7.71□□□□□ -1.18
VPS41-205ENST00000414632 AKNAQ7Z591 1439 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 ITSN2Q9NZM3 1697 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 SUPT6HQ7KZ85 1726 aaKnown RBP7.7□□□□□ -1.18
VPS41-205ENST00000414632 ARAP3Q8WWN8 1544 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 TRIM66O15016 1216 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 RAPGEF3O95398 923 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 FOXK1P85037 733 aa7.7□□□□□ -1.18
VPS41-205ENST00000414632 PLCH2O75038 1416 aa7.69□□□□□ -1.18
VPS41-205ENST00000414632 KDM4CQ9H3R0 1056 aa7.69□□□□□ -1.18
VPS41-205ENST00000414632 DAXXQ9UER7 740 aaPredicted RBP7.69□□□□□ -1.18
VPS41-205ENST00000414632 MTUS2Q5JR59 1369 aa7.69□□□□□ -1.18
VPS41-205ENST00000414632 ADGRL1O94910 1474 aa7.68□□□□□ -1.18
VPS41-205ENST00000414632 SAMD9LQ8IVG5 1584 aa7.68□□□□□ -1.18
VPS41-205ENST00000414632 PDE4DQ08499 809 aa7.68□□□□□ -1.18
VPS41-205ENST00000414632 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
VPS41-205ENST00000414632 DENND4BO75064 1496 aaPredicted RBP7.68□□□□□ -1.18
VPS41-205ENST00000414632 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
VPS41-205ENST00000414632 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
VPS41-205ENST00000414632 SCAPERQ9BY12 1400 aa7.67□□□□□ -1.18
VPS41-205ENST00000414632 ABCC1P33527 1531 aa7.67□□□□□ -1.18
VPS41-205ENST00000414632 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
VPS41-205ENST00000414632 ARHGEF40Q8TER5 1519 aa7.66□□□□□ -1.18
VPS41-205ENST00000414632 GPATCH8Q9UKJ3 1502 aaKnown RBP7.66□□□□□ -1.18
VPS41-205ENST00000414632 C2orf72A6NCS6 295 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 GRXCR2A6NFK2 248 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 GPR37O15354 613 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 MAP3K9P80192 1104 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
VPS41-205ENST00000414632 EFCAB2Q5VUJ9 269 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 LRRC9Q6ZRR7 1453 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 POGZQ7Z3K3 1410 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 PHLDB1Q86UU1 1377 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 HOMEZQ8IX15 550 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 CCNB3Q8WWL7 1395 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 SYCP2Q9BX26 1530 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
VPS41-205ENST00000414632 ARHGEF12Q9NZN5 1544 aa7.65□□□□□ -1.18
VPS41-205ENST00000414632 HECW2Q9P2P5 1572 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 ZMYM4Q5VZL5 1548 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 ZFYVE16Q7Z3T8 1539 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 NUTM2FA1L443 756 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 OCEL1Q9H607 264 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 BOLA1Q9Y3E2 137 aa7.64□□□□□ -1.19
VPS41-205ENST00000414632 ABCA6Q8N139 1617 aa7.63□□□□□ -1.19
VPS41-205ENST00000414632 YEATS2Q9ULM3 1422 aa7.63□□□□□ -1.19
VPS41-205ENST00000414632 MINK1Q8N4C8 1332 aaPredicted RBP7.63□□□□□ -1.19
VPS41-205ENST00000414632 KIF3CO14782 793 aa7.63□□□□□ -1.19
VPS41-205ENST00000414632 IRX5P78411 483 aaPredicted RBP7.63□□□□□ -1.19
VPS41-205ENST00000414632 KIDINS220Q9ULH0 1771 aa7.63□□□□□ -1.19
VPS41-205ENST00000414632 KDM5CP41229 1560 aa7.63□□□□□ -1.19
VPS41-205ENST00000414632 TRAPPC8Q9Y2L5 1435 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 BCORL1Q5H9F3 1711 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 G3V3G9 751 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 ATN1P54259 1190 aaPredicted RBP7.62□□□□□ -1.19
VPS41-205ENST00000414632 ASTLQ6HA08 431 aaPredicted RBP7.62□□□□□ -1.19
VPS41-205ENST00000414632 AFAP1Q8N556 730 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 DIP2CQ9Y2E4 1556 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 MAP3K1Q13233 1512 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 ZNF518AQ6AHZ1 1483 aa7.62□□□□□ -1.19
VPS41-205ENST00000414632 ZNF644Q9H582 1327 aaPredicted RBP7.61□□□□□ -1.19
VPS41-205ENST00000414632 MADDQ8WXG6 1647 aa7.61□□□□□ -1.19
VPS41-205ENST00000414632 ATMINO43313 823 aaPredicted RBP7.61□□□□□ -1.19
VPS41-205ENST00000414632 HNRNPMP52272 730 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS41-205ENST00000414632 CFDP1Q9UEE9 299 aaPredicted RBP7.61□□□□□ -1.19
VPS41-205ENST00000414632 CAMSAP2Q08AD1 1489 aa7.61□□□□□ -1.19
VPS41-205ENST00000414632 RIMS1Q86UR5 1692 aaKnown RBP7.6□□□□□ -1.19
VPS41-205ENST00000414632 IRF6O14896 467 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 OSBPP22059 807 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 IER5LQ5T953 404 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
VPS41-205ENST00000414632 UPF1Q92900 1129 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS41-205ENST00000414632 FAM117AQ9C073 453 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 FER1L4A9Z1Z3 1794 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 ADAMTSL3P82987 1691 aa7.6□□□□□ -1.19
VPS41-205ENST00000414632 INO80Q9ULG1 1556 aaPredicted RBP7.59□□□□□ -1.19
VPS41-205ENST00000414632 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
VPS41-205ENST00000414632 MAP2K5Q13163 448 aa7.59□□□□□ -1.19
VPS41-205ENST00000414632 ADGBQ8N7X0 1667 aa7.59□□□□□ -1.19
VPS41-205ENST00000414632 ATP7AQ04656 1500 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 MAGI2Q86UL8 1455 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 MLECQ14165 292 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 CCDC102AQ96A19 550 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 PTPN23Q9H3S7 1636 aa7.58□□□□□ -1.2
VPS41-205ENST00000414632 CROCC2H7BZ55 1655 aa7.57□□□□□ -1.2
VPS41-205ENST00000414632 PLEKHH2Q8IVE3 1493 aa7.57□□□□□ -1.2
VPS41-205ENST00000414632 GNPATO15228 680 aa7.57□□□□□ -1.2
VPS41-205ENST00000414632 PLCG2P16885 1265 aa7.57□□□□□ -1.2
VPS41-205ENST00000414632 PTGER2P43116 358 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms