RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
CLINT1-201ENST00000411809 INSRP06213 1382 aa17.63■□□□□ 0.41
CLINT1-201ENST00000411809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.414e-7■■■□□ 14.8
CLINT1-201ENST00000411809 PPLO60437 1756 aa17.62■□□□□ 0.41
CLINT1-201ENST00000411809 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
CLINT1-201ENST00000411809 UGGT1Q9NYU2 1555 aa17.62■□□□□ 0.41
CLINT1-201ENST00000411809 PIK3C2BO00750 1634 aa17.6■□□□□ 0.41
CLINT1-201ENST00000411809 MYBBP1AQ9BQG0 1328 aaKnown RBP17.6■□□□□ 0.41
CLINT1-201ENST00000411809 RICTORQ6R327 1708 aa17.6■□□□□ 0.41
CLINT1-201ENST00000411809 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
CLINT1-201ENST00000411809 RALBP1Q15311 655 aa17.6■□□□□ 0.41
CLINT1-201ENST00000411809 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
CLINT1-201ENST00000411809 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
CLINT1-201ENST00000411809 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
CLINT1-201ENST00000411809 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
CLINT1-201ENST00000411809 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.41
CLINT1-201ENST00000411809 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
CLINT1-201ENST00000411809 KDM5AP29375 1690 aaKnown RBP17.56■□□□□ 0.4
CLINT1-201ENST00000411809 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
CLINT1-201ENST00000411809 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
CLINT1-201ENST00000411809 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
CLINT1-201ENST00000411809 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
CLINT1-201ENST00000411809 NEO1Q92859 1461 aa17.53■□□□□ 0.4
CLINT1-201ENST00000411809 ABCC3O15438 1527 aa17.53■□□□□ 0.4
CLINT1-201ENST00000411809 KANK1Q14678 1352 aa17.52■□□□□ 0.39
CLINT1-201ENST00000411809 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.39
CLINT1-201ENST00000411809 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
CLINT1-201ENST00000411809 GLI2P10070 1586 aa17.51■□□□□ 0.39
CLINT1-201ENST00000411809 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
CLINT1-201ENST00000411809 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
CLINT1-201ENST00000411809 NPATQ14207 1427 aa17.49■□□□□ 0.39
CLINT1-201ENST00000411809 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
CLINT1-201ENST00000411809 ERVK-7P63135 1459 aa17.48■□□□□ 0.39
CLINT1-201ENST00000411809 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
CLINT1-201ENST00000411809 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
CLINT1-201ENST00000411809 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
CLINT1-201ENST00000411809 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
CLINT1-201ENST00000411809 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
CLINT1-201ENST00000411809 NOS1P29475 1434 aa17.46■□□□□ 0.39
CLINT1-201ENST00000411809 KIF3BO15066 747 aa17.45■□□□□ 0.38
CLINT1-201ENST00000411809 TMF1P82094 1093 aa17.45■□□□□ 0.38
CLINT1-201ENST00000411809 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
CLINT1-201ENST00000411809 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
CLINT1-201ENST00000411809 QRICH2Q9H0J4 1663 aa17.44■□□□□ 0.38
CLINT1-201ENST00000411809 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
CLINT1-201ENST00000411809 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
CLINT1-201ENST00000411809 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
CLINT1-201ENST00000411809 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
CLINT1-201ENST00000411809 PANK3Q9H999 370 aa17.43■□□□□ 0.38
CLINT1-201ENST00000411809 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
CLINT1-201ENST00000411809 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
CLINT1-201ENST00000411809 ARHGEF28Q8N1W1 1705 aaKnown RBP17.42■□□□□ 0.38
CLINT1-201ENST00000411809 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
CLINT1-201ENST00000411809 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
CLINT1-201ENST00000411809 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
CLINT1-201ENST00000411809 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
CLINT1-201ENST00000411809 IPO9Q96P70 1041 aaKnown RBP17.39■□□□□ 0.37
CLINT1-201ENST00000411809 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
CLINT1-201ENST00000411809 MYO5BQ9ULV0 1848 aa17.38■□□□□ 0.37
CLINT1-201ENST00000411809 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
CLINT1-201ENST00000411809 REREQ9P2R6 1566 aa17.37■□□□□ 0.37
CLINT1-201ENST00000411809 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
CLINT1-201ENST00000411809 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
CLINT1-201ENST00000411809 CFAP65Q6ZU64 1925 aaKnown RBP17.36■□□□□ 0.37
CLINT1-201ENST00000411809 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
CLINT1-201ENST00000411809 DIP2BQ9P265 1576 aa17.35■□□□□ 0.37
CLINT1-201ENST00000411809 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
CLINT1-201ENST00000411809 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
CLINT1-201ENST00000411809 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
CLINT1-201ENST00000411809 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
CLINT1-201ENST00000411809 CFAP70Q5T0N1 1121 aa17.32■□□□□ 0.36
CLINT1-201ENST00000411809 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
CLINT1-201ENST00000411809 ZFYVE9O95405 1425 aa17.31■□□□□ 0.36
CLINT1-201ENST00000411809 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
CLINT1-201ENST00000411809 CLTCQ00610 1675 aaKnown RBP17.3■□□□□ 0.36
CLINT1-201ENST00000411809 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
CLINT1-201ENST00000411809 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
CLINT1-201ENST00000411809 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
CLINT1-201ENST00000411809 PPP2R1AP30153 589 aa17.3■□□□□ 0.36
CLINT1-201ENST00000411809 EXOC6Q8TAG9 804 aa17.3■□□□□ 0.36
CLINT1-201ENST00000411809 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
CLINT1-201ENST00000411809 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
CLINT1-201ENST00000411809 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
CLINT1-201ENST00000411809 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
CLINT1-201ENST00000411809 YEATS2Q9ULM3 1422 aa17.28■□□□□ 0.36
CLINT1-201ENST00000411809 SETD1AO15047 1707 aaKnown RBP17.28■□□□□ 0.36
CLINT1-201ENST00000411809 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLINT1-201ENST00000411809 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
CLINT1-201ENST00000411809 CARD14Q9BXL6 1004 aa17.25■□□□□ 0.35
CLINT1-201ENST00000411809 AGLP35573 1532 aa17.25■□□□□ 0.35
CLINT1-201ENST00000411809 NEFMP07197 916 aa17.25■□□□□ 0.35
CLINT1-201ENST00000411809 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
CLINT1-201ENST00000411809 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
CLINT1-201ENST00000411809 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
CLINT1-201ENST00000411809 RAPGEF3O95398 923 aa17.22■□□□□ 0.35
CLINT1-201ENST00000411809 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
CLINT1-201ENST00000411809 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
CLINT1-201ENST00000411809 PLIN1O60240 522 aa17.21■□□□□ 0.35
CLINT1-201ENST00000411809 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.34
CLINT1-201ENST00000411809 PDE4AP27815 886 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms