RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.12■■□□□ 1.93
RFC4-203ENST00000411792 RIMS2Q9UQ26 1411 aa27.12■■□□□ 1.93
RFC4-203ENST00000411792 TRPM2O94759 1503 aa27.11■■□□□ 1.93
RFC4-203ENST00000411792 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
RFC4-203ENST00000411792 RAB3GAP2Q9H2M9 1393 aa27.09■■□□□ 1.93
RFC4-203ENST00000411792 MPHOSPH9Q99550 1183 aa27.09■■□□□ 1.93
RFC4-203ENST00000411792 ZFYVE9O95405 1425 aa27.08■■□□□ 1.93
RFC4-203ENST00000411792 MYO5BQ9ULV0 1848 aa27.08■■□□□ 1.93
RFC4-203ENST00000411792 ZNF326Q5BKZ1 582 aaKnown RBP27.07■■□□□ 1.92
RFC4-203ENST00000411792 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
RFC4-203ENST00000411792 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
RFC4-203ENST00000411792 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
RFC4-203ENST00000411792 STRCP1A6NGW2 1772 aa27.04■■□□□ 1.92
RFC4-203ENST00000411792 TOM1O60784 492 aa27.03■■□□□ 1.92
RFC4-203ENST00000411792 CLTCL1P53675 1640 aa27.03■■□□□ 1.92
RFC4-203ENST00000411792 FOXD1Q16676 465 aa27.03■■□□□ 1.92
RFC4-203ENST00000411792 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
RFC4-203ENST00000411792 PIP4K2BP78356 416 aa27.01■■□□□ 1.91
RFC4-203ENST00000411792 LRRC7Q96NW7 1537 aa26.98■■□□□ 1.91
RFC4-203ENST00000411792 CCDC144AA2RUR9 1427 aa26.98■■□□□ 1.91
RFC4-203ENST00000411792 HRCP23327 699 aa26.95■■□□□ 1.9
RFC4-203ENST00000411792 KIF1BO60333 1816 aa26.94■■□□□ 1.9
RFC4-203ENST00000411792 KCNA6P17658 529 aa26.93■■□□□ 1.9
RFC4-203ENST00000411792 TBX22Q9Y458 520 aa26.91■■□□□ 1.9
RFC4-203ENST00000411792 PROSER2Q86WR7 435 aaPredicted RBP26.9■■□□□ 1.9
RFC4-203ENST00000411792 RPGRIP1LQ68CZ1 1315 aa26.89■■□□□ 1.89
RFC4-203ENST00000411792 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
RFC4-203ENST00000411792 NEXMIFQ5QGS0 1516 aa26.87■■□□□ 1.89
RFC4-203ENST00000411792 VGFO15240 615 aaPredicted RBP26.86■■□□□ 1.89
RFC4-203ENST00000411792 ADAMTS13Q76LX8 1427 aa26.86■■□□□ 1.89
RFC4-203ENST00000411792 RBM33Q96EV2 1170 aaKnown RBP26.85■■□□□ 1.89
RFC4-203ENST00000411792 TMEM94Q12767 1356 aa26.84■■□□□ 1.89
RFC4-203ENST00000411792 NKTRP30414 1462 aaKnown RBP26.84■■□□□ 1.89
RFC4-203ENST00000411792 NWD1Q149M9 1564 aa26.83■■□□□ 1.89
RFC4-203ENST00000411792 PIK3R4Q99570 1358 aa26.83■■□□□ 1.88
RFC4-203ENST00000411792 HSPA1LP34931 641 aa26.82■■□□□ 1.88
RFC4-203ENST00000411792 RGL3Q3MIN7 710 aa26.82■■□□□ 1.88
RFC4-203ENST00000411792 SETBP1Q9Y6X0 1596 aa26.82■■□□□ 1.88
RFC4-203ENST00000411792 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
RFC4-203ENST00000411792 ALKQ9UM73 1620 aa26.79■■□□□ 1.88
RFC4-203ENST00000411792 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
RFC4-203ENST00000411792 CHD2O14647 1828 aaKnown RBP26.78■■□□□ 1.88
RFC4-203ENST00000411792 DISP3Q9P2K9 1392 aa26.76■■□□□ 1.87
RFC4-203ENST00000411792 ANKRD30BQ9BXX2 1392 aa26.75■■□□□ 1.87
RFC4-203ENST00000411792 C14orf37Q86TY3 774 aa26.75■■□□□ 1.87
RFC4-203ENST00000411792 AMOTL2Q9Y2J4 779 aa26.74■■□□□ 1.87
RFC4-203ENST00000411792 NRXN3Q9Y4C0 1643 aa26.74■■□□□ 1.87
RFC4-203ENST00000411792 MSH6P52701 1360 aa26.72■■□□□ 1.87
RFC4-203ENST00000411792 PPLO60437 1756 aa26.71■■□□□ 1.87
RFC4-203ENST00000411792 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
RFC4-203ENST00000411792 METP08581 1390 aa26.7■■□□□ 1.86
RFC4-203ENST00000411792 PTPRUQ92729 1446 aa26.68■■□□□ 1.86
RFC4-203ENST00000411792 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
RFC4-203ENST00000411792 NCOA3Q9Y6Q9 1424 aa26.66■■□□□ 1.86
RFC4-203ENST00000411792 ILDR2Q71H61 639 aa26.63■■□□□ 1.85
RFC4-203ENST00000411792 XRN1Q8IZH2 1706 aaKnown RBP26.62■■□□□ 1.85
RFC4-203ENST00000411792 IFT172Q9UG01 1749 aa26.61■■□□□ 1.85
RFC4-203ENST00000411792 FAM135BQ49AJ0 1406 aa26.6■■□□□ 1.85
RFC4-203ENST00000411792 SLAIN2Q9P270 581 aa26.6■■□□□ 1.85
RFC4-203ENST00000411792 ATF3P18847 181 aa26.59■■□□□ 1.85
RFC4-203ENST00000411792 MYOM2P54296 1465 aa26.59■■□□□ 1.85
RFC4-203ENST00000411792 PIK3C2GO75747 1445 aa26.58■■□□□ 1.85
RFC4-203ENST00000411792 C19orf44Q9H6X5 657 aa26.58■■□□□ 1.85
RFC4-203ENST00000411792 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
RFC4-203ENST00000411792 CADPS2Q86UW7 1296 aa26.56■■□□□ 1.84
RFC4-203ENST00000411792 SETD1AO15047 1707 aaKnown RBP26.55■■□□□ 1.84
RFC4-203ENST00000411792 PTCH1Q13635 1447 aa26.55■■□□□ 1.84
RFC4-203ENST00000411792 DCAF11Q8TEB1 546 aa26.54■■□□□ 1.84
RFC4-203ENST00000411792 STAC3Q96MF2 364 aa26.53■■□□□ 1.84
RFC4-203ENST00000411792 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.53■■□□□ 1.84
RFC4-203ENST00000411792 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
RFC4-203ENST00000411792 NRXN1Q9ULB1 1477 aa26.51■■□□□ 1.83
RFC4-203ENST00000411792 C14orf93Q9H972 538 aaKnown RBP26.5■■□□□ 1.83
RFC4-203ENST00000411792 STK26Q9P289 416 aa26.5■■□□□ 1.83
RFC4-203ENST00000411792 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
RFC4-203ENST00000411792 DCCP43146 1447 aa26.49■■□□□ 1.83
RFC4-203ENST00000411792 PRAG1Q86YV5 1406 aa26.49■■□□□ 1.83
RFC4-203ENST00000411792 ROBO2Q9HCK4 1378 aa26.49■■□□□ 1.83
RFC4-203ENST00000411792 ADGRL3Q9HAR2 1447 aa26.48■■□□□ 1.83
RFC4-203ENST00000411792 LRPPRCP42704 1394 aaKnown RBP26.48■■□□□ 1.83
RFC4-203ENST00000411792 TMEM132EQ6IEE7 984 aa26.48■■□□□ 1.83
RFC4-203ENST00000411792 LAMC1P11047 1609 aa26.47■■□□□ 1.83
RFC4-203ENST00000411792 CFAP70Q5T0N1 1121 aa26.47■■□□□ 1.83
RFC4-203ENST00000411792 PHF23Q9BUL5 403 aaPredicted RBP26.47■■□□□ 1.83
RFC4-203ENST00000411792 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
RFC4-203ENST00000411792 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
RFC4-203ENST00000411792 ABCC11Q96J66 1382 aa26.44■■□□□ 1.82
RFC4-203ENST00000411792 PHLPP1O60346 1717 aa26.43■■□□□ 1.82
RFC4-203ENST00000411792 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
RFC4-203ENST00000411792 TECPR2O15040 1411 aa26.42■■□□□ 1.82
RFC4-203ENST00000411792 SOCS7O14512 581 aa26.39■■□□□ 1.82
RFC4-203ENST00000411792 NALCNQ8IZF0 1738 aa26.39■■□□□ 1.81
RFC4-203ENST00000411792 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
RFC4-203ENST00000411792 KNDC1Q76NI1 1749 aa26.36■■□□□ 1.81
RFC4-203ENST00000411792 BRINP3Q76B58 766 aa26.36■■□□□ 1.81
RFC4-203ENST00000411792 WAPLQ7Z5K2 1190 aa26.36■■□□□ 1.81
RFC4-203ENST00000411792 MST1RQ04912 1400 aa26.36■■□□□ 1.81
RFC4-203ENST00000411792 SIN3AQ96ST3 1273 aa26.35■■□□□ 1.81
RFC4-203ENST00000411792 SIRT1Q96EB6 747 aa26.34■■□□□ 1.81
RFC4-203ENST00000411792 JCADQ9P266 1359 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms