RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
PBRM1-208ENST00000410007 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 KIF3AQ9Y496 699 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 GNAI1P63096 354 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
PBRM1-208ENST00000410007 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.61
PBRM1-208ENST00000410007 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
PBRM1-208ENST00000410007 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-208ENST00000410007 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
PBRM1-208ENST00000410007 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 NLRP6P59044 892 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-208ENST00000410007 ST18O60284 1047 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 GPRASP1Q5JY77 1395 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
PBRM1-208ENST00000410007 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 ROCK1Q13464 1354 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
PBRM1-208ENST00000410007 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 TOMM22Q9NS69 142 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 CLSTN1O94985 981 aa11.25□□□□□ -0.61
PBRM1-208ENST00000410007 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
PBRM1-208ENST00000410007 CHAF1AQ13111 956 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-208ENST00000410007 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
PBRM1-208ENST00000410007 KIAA1107Q9UPP5 1409 aa11.24□□□□□ -0.61
PBRM1-208ENST00000410007 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-208ENST00000410007 NLRP2Q9NX02 1062 aa11.24□□□□□ -0.61
PBRM1-208ENST00000410007 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-208ENST00000410007 DZIP1LQ8IYY4 767 aaKnown RBP11.23□□□□□ -0.61
PBRM1-208ENST00000410007 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
PBRM1-208ENST00000410007 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
PBRM1-208ENST00000410007 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
PBRM1-208ENST00000410007 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
PBRM1-208ENST00000410007 FKBP5Q13451 457 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-208ENST00000410007 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
PBRM1-208ENST00000410007 MSH5O43196 834 aa11.22□□□□□ -0.61
PBRM1-208ENST00000410007 PLIN1O60240 522 aa11.22□□□□□ -0.61
PBRM1-208ENST00000410007 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
PBRM1-208ENST00000410007 POGZQ7Z3K3 1410 aa11.22□□□□□ -0.61
PBRM1-208ENST00000410007 HMOX1P09601 288 aa11.21□□□□□ -0.61
PBRM1-208ENST00000410007 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
PBRM1-208ENST00000410007 CRBNQ96SW2 442 aa11.21□□□□□ -0.61
PBRM1-208ENST00000410007 RUFY2Q8WXA3 655 aa11.21□□□□□ -0.61
PBRM1-208ENST00000410007 PRAM1Q96QH2 718 aa11.21□□□□□ -0.61
PBRM1-208ENST00000410007 WASHC2AQ641Q2 1341 aa11.21□□□□□ -0.62
PBRM1-208ENST00000410007 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.62
PBRM1-208ENST00000410007 RAPGEF3O95398 923 aa11.21□□□□□ -0.62
PBRM1-208ENST00000410007 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.62
PBRM1-208ENST00000410007 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 BRD4O60885 1362 aaPredicted RBP11.2□□□□□ -0.62
PBRM1-208ENST00000410007 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 MTHFSP49914 203 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 TPM4P67936 248 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
PBRM1-208ENST00000410007 NAP1L5Q96NT1 182 aaPredicted RBP11.2□□□□□ -0.62
PBRM1-208ENST00000410007 IPO9Q96P70 1041 aaKnown RBP11.2□□□□□ -0.62
PBRM1-208ENST00000410007 NUTM2GQ5VZR2 741 aa11.19□□□□□ -0.62
PBRM1-208ENST00000410007 NECTIN2Q92692 538 aa11.19□□□□□ -0.62
PBRM1-208ENST00000410007 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
PBRM1-208ENST00000410007 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
PBRM1-208ENST00000410007 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
PBRM1-208ENST00000410007 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
PBRM1-208ENST00000410007 AAMPQ13685 434 aa11.19□□□□□ -0.62
PBRM1-208ENST00000410007 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
PBRM1-208ENST00000410007 G3BP1Q13283 466 aaKnown RBP eCLIP11.19□□□□□ -0.62
PBRM1-208ENST00000410007 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
PBRM1-208ENST00000410007 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 RASSF8Q8NHQ8 419 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 DAPK1P53355 1430 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 ANKRD30BQ9BXX2 1392 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.18□□□□□ -0.62
PBRM1-208ENST00000410007 REC8O95072 547 aa11.18□□□□□ -0.62
PBRM1-208ENST00000410007 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
PBRM1-208ENST00000410007 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
PBRM1-208ENST00000410007 EPRSP07814 1512 aaKnown RBP11.17□□□□□ -0.62
PBRM1-208ENST00000410007 CPLX2Q6PUV4 134 aaKnown RBP11.17□□□□□ -0.62
PBRM1-208ENST00000410007 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
PBRM1-208ENST00000410007 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
PBRM1-208ENST00000410007 PLEKHO1Q53GL0 409 aaPredicted RBP11.17□□□□□ -0.62
PBRM1-208ENST00000410007 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
PBRM1-208ENST00000410007 SYNE3Q6ZMZ3 975 aa11.16□□□□□ -0.62
PBRM1-208ENST00000410007 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
PBRM1-208ENST00000410007 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
PBRM1-208ENST00000410007 AKAP17AQ02040 695 aaKnown RBP11.16□□□□□ -0.62
PBRM1-208ENST00000410007 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
PBRM1-208ENST00000410007 VPS37DQ86XT2 251 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 ATP6V1DQ9Y5K8 247 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
PBRM1-208ENST00000410007 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 MARCH6O60337 910 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 PDE4AP27815 886 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 TCP11L2Q8N4U5 519 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 CDK19Q9BWU1 502 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms