RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 STAG3Q9UJ98 1225 aa37.78■■■■□ 3.64
C2orf88-204ENST00000409870 KIF1BO60333 1816 aa37.76■■■■□ 3.63
C2orf88-204ENST00000409870 CCDC144AA2RUR9 1427 aa37.75■■■■□ 3.63
C2orf88-204ENST00000409870 STRCP1A6NGW2 1772 aa37.75■■■■□ 3.63
C2orf88-204ENST00000409870 ANKRD30BQ9BXX2 1392 aa37.72■■■■□ 3.63
C2orf88-204ENST00000409870 TMEM2Q9UHN6 1383 aa37.71■■■■□ 3.63
C2orf88-204ENST00000409870 LTKP29376 864 aa37.69■■■■□ 3.62
C2orf88-204ENST00000409870 TXNDC2Q86VQ3 553 aa37.69■■■■□ 3.62
C2orf88-204ENST00000409870 DHX57Q6P158 1386 aaKnown RBP37.68■■■■□ 3.62
C2orf88-204ENST00000409870 CHGAP10645 457 aaKnown RBP37.68■■■■□ 3.62
C2orf88-204ENST00000409870 EID1Q9Y6B2 187 aa37.66■■■■□ 3.62
C2orf88-204ENST00000409870 ZFYVE9O95405 1425 aa37.63■■■■□ 3.61
C2orf88-204ENST00000409870 LRRC7Q96NW7 1537 aa37.6■■■■□ 3.61
C2orf88-204ENST00000409870 RIMS2Q9UQ26 1411 aa37.59■■■■□ 3.61
C2orf88-204ENST00000409870 SPATA31E1Q6ZUB1 1445 aa37.58■■■■□ 3.61
C2orf88-204ENST00000409870 TOM1O60784 492 aa37.56■■■■□ 3.6
C2orf88-204ENST00000409870 NEXMIFQ5QGS0 1516 aa37.54■■■■□ 3.6
C2orf88-204ENST00000409870 ALKQ9UM73 1620 aa37.54■■■■□ 3.6
C2orf88-204ENST00000409870 SCAF1Q9H7N4 1312 aaKnown RBP37.51■■■■□ 3.6
C2orf88-204ENST00000409870 ZNF326Q5BKZ1 582 aaKnown RBP37.51■■■■□ 3.59
C2orf88-204ENST00000409870 DISP3Q9P2K9 1392 aa37.5■■■■□ 3.59
C2orf88-204ENST00000409870 HDGFP51858 240 aaKnown RBP37.48■■■■□ 3.59
C2orf88-204ENST00000409870 PIP4K2BP78356 416 aa37.48■■■■□ 3.59
C2orf88-204ENST00000409870 PPLO60437 1756 aa37.48■■■■□ 3.59
C2orf88-204ENST00000409870 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.47■■■■□ 3.59
C2orf88-204ENST00000409870 XIRP1Q702N8 1843 aaKnown RBP37.46■■■■□ 3.59
C2orf88-204ENST00000409870 IFT172Q9UG01 1749 aa37.46■■■■□ 3.59
C2orf88-204ENST00000409870 RPGRIP1LQ68CZ1 1315 aa37.44■■■■□ 3.58
C2orf88-204ENST00000409870 PPP1R15AO75807 674 aaPredicted RBP37.42■■■■□ 3.58
C2orf88-204ENST00000409870 PLEKHG1Q9ULL1 1385 aa37.42■■■■□ 3.58
C2orf88-204ENST00000409870 RGL3Q3MIN7 710 aa37.4■■■■□ 3.58
C2orf88-204ENST00000409870 NUTM2DQ5VT03 806 aaPredicted RBP37.4■■■■□ 3.58
C2orf88-204ENST00000409870 NWD1Q149M9 1564 aa37.39■■■■□ 3.58
C2orf88-204ENST00000409870 HSPA1LP34931 641 aa37.36■■■■□ 3.57
C2orf88-204ENST00000409870 SLC26A8Q96RN1 970 aa37.36■■■■□ 3.57
C2orf88-204ENST00000409870 SETBP1Q9Y6X0 1596 aa37.33■■■■□ 3.57
C2orf88-204ENST00000409870 NKTRP30414 1462 aaKnown RBP37.33■■■■□ 3.57
C2orf88-204ENST00000409870 NRXN3Q9Y4C0 1643 aa37.32■■■■□ 3.56
C2orf88-204ENST00000409870 VGFO15240 615 aaPredicted RBP37.3■■■■□ 3.56
C2orf88-204ENST00000409870 KCNA6P17658 529 aa37.3■■■■□ 3.56
C2orf88-204ENST00000409870 SIN3AQ96ST3 1273 aa37.3■■■■□ 3.56
C2orf88-204ENST00000409870 BCANQ96GW7 911 aa37.29■■■■□ 3.56
C2orf88-204ENST00000409870 DIP2AQ14689 1571 aa37.29■■■■□ 3.56
C2orf88-204ENST00000409870 MYOM2P54296 1465 aa37.29■■■■□ 3.56
C2orf88-204ENST00000409870 ADAMTS13Q76LX8 1427 aa37.27■■■■□ 3.56
C2orf88-204ENST00000409870 TMEM94Q12767 1356 aa37.26■■■■□ 3.56
C2orf88-204ENST00000409870 CHD2O14647 1828 aaKnown RBP37.25■■■■□ 3.55
C2orf88-204ENST00000409870 SENP3Q9H4L4 574 aaPredicted RBP37.23■■■■□ 3.55
C2orf88-204ENST00000409870 NRXN1Q9ULB1 1477 aa37.22■■■■□ 3.55
C2orf88-204ENST00000409870 ADGRF5Q8IZF2 1346 aa37.21■■■■□ 3.55
C2orf88-204ENST00000409870 MED1Q15648 1581 aaPredicted RBP37.21■■■■□ 3.55
C2orf88-204ENST00000409870 NEUROD1Q13562 356 aa37.2■■■■□ 3.55
C2orf88-204ENST00000409870 CLSPNQ9HAW4 1339 aa37.2■■■■□ 3.55
C2orf88-204ENST00000409870 ILDR2Q71H61 639 aa37.19■■■■□ 3.54
C2orf88-204ENST00000409870 PIK3C2GO75747 1445 aa37.19■■■■□ 3.54
C2orf88-204ENST00000409870 SETD1AO15047 1707 aaKnown RBP37.18■■■■□ 3.54
C2orf88-204ENST00000409870 TBX22Q9Y458 520 aa37.18■■■■□ 3.54
C2orf88-204ENST00000409870 PROSER2Q86WR7 435 aaPredicted RBP37.17■■■■□ 3.54
C2orf88-204ENST00000409870 DCAF11Q8TEB1 546 aa37.16■■■■□ 3.54
C2orf88-204ENST00000409870 STAC3Q96MF2 364 aa37.15■■■■□ 3.54
C2orf88-204ENST00000409870 CCER1Q8TC90 406 aaPredicted RBP37.11■■■■□ 3.53
C2orf88-204ENST00000409870 PIK3R4Q99570 1358 aa37.1■■■■□ 3.53
C2orf88-204ENST00000409870 RBM33Q96EV2 1170 aaKnown RBP37.1■■■■□ 3.53
C2orf88-204ENST00000409870 LAMC1P11047 1609 aa37.1■■■■□ 3.53
C2orf88-204ENST00000409870 L3MBTL2Q969R5 705 aa37.08■■■■□ 3.53
C2orf88-204ENST00000409870 KDM2AQ9Y2K7 1162 aa37.08■■■■□ 3.53
C2orf88-204ENST00000409870 ROBO1Q9Y6N7 1651 aa37.07■■■■□ 3.52
C2orf88-204ENST00000409870 MSH6P52701 1360 aa37.07■■■■□ 3.52
C2orf88-204ENST00000409870 FAM135BQ49AJ0 1406 aa37.07■■■■□ 3.52
C2orf88-204ENST00000409870 METP08581 1390 aa37.05■■■■□ 3.52
C2orf88-204ENST00000409870 TONSLQ96HA7 1378 aa37.04■■■■□ 3.52
C2orf88-204ENST00000409870 XRN1Q8IZH2 1706 aaKnown RBP37.01■■■■□ 3.52
C2orf88-204ENST00000409870 PTPRUQ92729 1446 aa37.01■■■■□ 3.52
C2orf88-204ENST00000409870 ASXL1Q8IXJ9 1541 aa37.01■■■■□ 3.51
C2orf88-204ENST00000409870 PRAG1Q86YV5 1406 aa36.99■■■■□ 3.51
C2orf88-204ENST00000409870 C14orf93Q9H972 538 aaKnown RBP36.99■■■■□ 3.51
C2orf88-204ENST00000409870 NCOA3Q9Y6Q9 1424 aa36.98■■■■□ 3.51
C2orf88-204ENST00000409870 KIAA1210Q9ULL0 1709 aa36.95■■■■□ 3.51
C2orf88-204ENST00000409870 CFAP70Q5T0N1 1121 aa36.94■■■■□ 3.5
C2orf88-204ENST00000409870 SOCS7O14512 581 aa36.93■■■■□ 3.5
C2orf88-204ENST00000409870 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.91■■■■□ 3.5
C2orf88-204ENST00000409870 AMOTL2Q9Y2J4 779 aa36.91■■■■□ 3.5
C2orf88-204ENST00000409870 ADGRB1O14514 1584 aa36.9■■■■□ 3.5
C2orf88-204ENST00000409870 KNDC1Q76NI1 1749 aa36.87■■■■□ 3.49
C2orf88-204ENST00000409870 C14orf37Q86TY3 774 aa36.86■■■■□ 3.49
C2orf88-204ENST00000409870 SLAIN2Q9P270 581 aa36.85■■■■□ 3.49
C2orf88-204ENST00000409870 LRPPRCP42704 1394 aaKnown RBP36.85■■■■□ 3.49
C2orf88-204ENST00000409870 PTCH1Q13635 1447 aa36.85■■■■□ 3.49
C2orf88-204ENST00000409870 TMEM132EQ6IEE7 984 aa36.85■■■■□ 3.49
C2orf88-204ENST00000409870 PHF23Q9BUL5 403 aaPredicted RBP36.85■■■■□ 3.49
C2orf88-204ENST00000409870 TIMELESSQ9UNS1 1208 aa36.85■■■■□ 3.49
C2orf88-204ENST00000409870 PHLPP1O60346 1717 aa36.84■■■■□ 3.49
C2orf88-204ENST00000409870 TRPM1Q7Z4N2 1603 aa36.84■■■■□ 3.49
C2orf88-204ENST00000409870 YTHDC2Q9H6S0 1430 aaKnown RBP36.84■■■■□ 3.49
C2orf88-204ENST00000409870 TECPR2O15040 1411 aa36.83■■■■□ 3.49
C2orf88-204ENST00000409870 ABCC11Q96J66 1382 aa36.8■■■■□ 3.48
C2orf88-204ENST00000409870 C19orf44Q9H6X5 657 aa36.77■■■■□ 3.48
C2orf88-204ENST00000409870 CADPS2Q86UW7 1296 aa36.76■■■■□ 3.48
C2orf88-204ENST00000409870 ROBO2Q9HCK4 1378 aa36.76■■■■□ 3.48
C2orf88-204ENST00000409870 DCCP43146 1447 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms