RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FOXD1Q16676 465 aa46.33■■■■■ 5.01
TRAF3IP1-203ENST00000409739 STRCP1A6NGW2 1772 aa46.3■■■■■ 5
TRAF3IP1-203ENST00000409739 HRCP23327 699 aa46.23■■■■■ 4.99
TRAF3IP1-203ENST00000409739 CPS1P31327 1500 aa46.22■■■■■ 4.99
TRAF3IP1-203ENST00000409739 PLEKHG1Q9ULL1 1385 aa46.22■■■■■ 4.99
TRAF3IP1-203ENST00000409739 HDGFP51858 240 aaKnown RBP46.2■■■■■ 4.99
TRAF3IP1-203ENST00000409739 NEXMIFQ5QGS0 1516 aa46.18■■■■■ 4.98
TRAF3IP1-203ENST00000409739 PPP1R15AO75807 674 aaPredicted RBP46.18■■■■■ 4.98
TRAF3IP1-203ENST00000409739 ABCF1Q8NE71 845 aaKnown RBP eCLIP46.18■■■■■ 4.98
TRAF3IP1-203ENST00000409739 IQSEC2Q5JU85 1478 aa46.18■■■■■ 4.98
TRAF3IP1-203ENST00000409739 CCDC144AA2RUR9 1427 aa46.15■■■■■ 4.98
TRAF3IP1-203ENST00000409739 NUTM2DQ5VT03 806 aaPredicted RBP46.14■■■■■ 4.98
TRAF3IP1-203ENST00000409739 ZNF326Q5BKZ1 582 aaKnown RBP46.13■■■■■ 4.98
TRAF3IP1-203ENST00000409739 PPLO60437 1756 aa46.1■■■■■ 4.97
TRAF3IP1-203ENST00000409739 FBXO41Q8TF61 875 aa46.09■■■■■ 4.97
TRAF3IP1-203ENST00000409739 SLC26A8Q96RN1 970 aa46.09■■■■■ 4.97
TRAF3IP1-203ENST00000409739 ILDR1Q86SU0 546 aaPredicted RBP46.08■■■■■ 4.97
TRAF3IP1-203ENST00000409739 SENP3Q9H4L4 574 aaPredicted RBP46.08■■■■■ 4.97
TRAF3IP1-203ENST00000409739 NRXN3Q9Y4C0 1643 aa46.07■■■■■ 4.97
TRAF3IP1-203ENST00000409739 DIP2AQ14689 1571 aa46.07■■■■■ 4.97
TRAF3IP1-203ENST00000409739 BCANQ96GW7 911 aa46.06■■■■■ 4.96
TRAF3IP1-203ENST00000409739 ADAMTS13Q76LX8 1427 aa46.03■■■■■ 4.96
TRAF3IP1-203ENST00000409739 CHD2O14647 1828 aaKnown RBP46.03■■■■■ 4.96
TRAF3IP1-203ENST00000409739 NWD1Q149M9 1564 aa46.03■■■■■ 4.96
TRAF3IP1-203ENST00000409739 SETBP1Q9Y6X0 1596 aa46.03■■■■■ 4.96
TRAF3IP1-203ENST00000409739 IFT172Q9UG01 1749 aa46.01■■■■■ 4.96
TRAF3IP1-203ENST00000409739 SPATA31E1Q6ZUB1 1445 aa46■■■■■ 4.95
TRAF3IP1-203ENST00000409739 XIRP1Q702N8 1843 aaKnown RBP45.98■■■■■ 4.95
TRAF3IP1-203ENST00000409739 LRRC7Q96NW7 1537 aa45.98■■■■■ 4.95
TRAF3IP1-203ENST00000409739 ANKRD30BQ9BXX2 1392 aa45.94■■■■■ 4.94
TRAF3IP1-203ENST00000409739 TBX22Q9Y458 520 aa45.91■■■■■ 4.94
TRAF3IP1-203ENST00000409739 RPGRIP1LQ68CZ1 1315 aa45.91■■■■■ 4.94
TRAF3IP1-203ENST00000409739 TRIM26Q12899 539 aaPredicted RBP45.9■■■■■ 4.94
TRAF3IP1-203ENST00000409739 NKTRP30414 1462 aaKnown RBP45.88■■■■■ 4.94
TRAF3IP1-203ENST00000409739 KCNA6P17658 529 aa45.88■■■■■ 4.94
TRAF3IP1-203ENST00000409739 SETD1AO15047 1707 aaKnown RBP45.86■■■■■ 4.93
TRAF3IP1-203ENST00000409739 RGL3Q3MIN7 710 aa45.82■■■■■ 4.93
TRAF3IP1-203ENST00000409739 PIK3R4Q99570 1358 aa45.82■■■■■ 4.93
TRAF3IP1-203ENST00000409739 VGFO15240 615 aaPredicted RBP45.81■■■■■ 4.92
TRAF3IP1-203ENST00000409739 XRN1Q8IZH2 1706 aaKnown RBP45.77■■■■■ 4.92
TRAF3IP1-203ENST00000409739 ALKQ9UM73 1620 aa45.74■■■■■ 4.91
TRAF3IP1-203ENST00000409739 PTPRUQ92729 1446 aa45.74■■■■■ 4.91
TRAF3IP1-203ENST00000409739 UBAP1LF5GYI3 381 aa45.71■■■■■ 4.91
TRAF3IP1-203ENST00000409739 TMEM94Q12767 1356 aa45.71■■■■■ 4.91
TRAF3IP1-203ENST00000409739 METP08581 1390 aa45.7■■■■■ 4.91
TRAF3IP1-203ENST00000409739 PROSER2Q86WR7 435 aaPredicted RBP45.67■■■■■ 4.9
TRAF3IP1-203ENST00000409739 ADGRF5Q8IZF2 1346 aa45.67■■■■■ 4.9
TRAF3IP1-203ENST00000409739 MYOM2P54296 1465 aa45.64■■■■■ 4.9
TRAF3IP1-203ENST00000409739 AMOTL2Q9Y2J4 779 aa45.61■■■■■ 4.89
TRAF3IP1-203ENST00000409739 PIK3C2GO75747 1445 aa45.6■■■■■ 4.89
TRAF3IP1-203ENST00000409739 RBM33Q96EV2 1170 aaKnown RBP45.6■■■■■ 4.89
TRAF3IP1-203ENST00000409739 NRXN1Q9ULB1 1477 aa45.58■■■■■ 4.89
TRAF3IP1-203ENST00000409739 TOM1O60784 492 aa45.58■■■■■ 4.89
TRAF3IP1-203ENST00000409739 LAMC1P11047 1609 aa45.52■■■■■ 4.88
TRAF3IP1-203ENST00000409739 NCOA3Q9Y6Q9 1424 aa45.51■■■■■ 4.88
TRAF3IP1-203ENST00000409739 DHX57Q6P158 1386 aaKnown RBP45.5■■■■■ 4.87
TRAF3IP1-203ENST00000409739 ASXL1Q8IXJ9 1541 aa45.5■■■■■ 4.87
TRAF3IP1-203ENST00000409739 SIPA1L2Q9P2F8 1722 aaPredicted RBP45.47■■■■■ 4.87
TRAF3IP1-203ENST00000409739 MSH6P52701 1360 aa45.46■■■■■ 4.87
TRAF3IP1-203ENST00000409739 PRAG1Q86YV5 1406 aa45.45■■■■■ 4.87
TRAF3IP1-203ENST00000409739 PIP4K2BP78356 416 aa45.44■■■■■ 4.86
TRAF3IP1-203ENST00000409739 PTCH1Q13635 1447 aa45.43■■■■■ 4.86
TRAF3IP1-203ENST00000409739 SCAF1Q9H7N4 1312 aaKnown RBP45.43■■■■■ 4.86
TRAF3IP1-203ENST00000409739 KNDC1Q76NI1 1749 aa45.42■■■■■ 4.86
TRAF3IP1-203ENST00000409739 NALCNQ8IZF0 1738 aa45.41■■■■■ 4.86
TRAF3IP1-203ENST00000409739 DCAF11Q8TEB1 546 aa45.38■■■■■ 4.86
TRAF3IP1-203ENST00000409739 C14orf37Q86TY3 774 aa45.35■■■■■ 4.85
TRAF3IP1-203ENST00000409739 ROBO2Q9HCK4 1378 aa45.34■■■■■ 4.85
TRAF3IP1-203ENST00000409739 C14orf93Q9H972 538 aaKnown RBP45.33■■■■■ 4.85
TRAF3IP1-203ENST00000409739 KDM2AQ9Y2K7 1162 aa45.32■■■■■ 4.85
TRAF3IP1-203ENST00000409739 TECPR2O15040 1411 aa45.3■■■■■ 4.84
TRAF3IP1-203ENST00000409739 STAC3Q96MF2 364 aa45.3■■■■■ 4.84
TRAF3IP1-203ENST00000409739 ROBO1Q9Y6N7 1651 aa45.3■■■■■ 4.84
TRAF3IP1-203ENST00000409739 CFAP70Q5T0N1 1121 aa45.29■■■■■ 4.84
TRAF3IP1-203ENST00000409739 LRPPRCP42704 1394 aaKnown RBP45.29■■■■■ 4.84
TRAF3IP1-203ENST00000409739 ADGRL3Q9HAR2 1447 aa45.28■■■■■ 4.84
TRAF3IP1-203ENST00000409739 TMEM132EQ6IEE7 984 aa45.28■■■■■ 4.84
TRAF3IP1-203ENST00000409739 C19orf44Q9H6X5 657 aa45.27■■■■■ 4.84
TRAF3IP1-203ENST00000409739 DCCP43146 1447 aa45.26■■■■■ 4.84
TRAF3IP1-203ENST00000409739 YTHDC2Q9H6S0 1430 aaKnown RBP45.26■■■■■ 4.84
TRAF3IP1-203ENST00000409739 SIN3AQ96ST3 1273 aa45.26■■■■■ 4.84
TRAF3IP1-203ENST00000409739 ADGRB1O14514 1584 aa45.24■■■■■ 4.83
TRAF3IP1-203ENST00000409739 ABCC11Q96J66 1382 aa45.21■■■■■ 4.83
TRAF3IP1-203ENST00000409739 FAM135BQ49AJ0 1406 aa45.21■■■■■ 4.83
TRAF3IP1-203ENST00000409739 STK26Q9P289 416 aa45.21■■■■■ 4.83
TRAF3IP1-203ENST00000409739 KIAA1210Q9ULL0 1709 aa45.19■■■■■ 4.82
TRAF3IP1-203ENST00000409739 CADPS2Q86UW7 1296 aa45.18■■■■■ 4.82
TRAF3IP1-203ENST00000409739 PCGF6Q9BYE7 350 aa45.18■■■■■ 4.82
TRAF3IP1-203ENST00000409739 ATF3P18847 181 aa45.17■■■■■ 4.82
TRAF3IP1-203ENST00000409739 HSPA1LP34931 641 aa45.17■■■■■ 4.82
TRAF3IP1-203ENST00000409739 SLAIN2Q9P270 581 aa45.16■■■■■ 4.82
TRAF3IP1-203ENST00000409739 NEUROD1Q13562 356 aa45.13■■■■■ 4.82
TRAF3IP1-203ENST00000409739 DLC1Q96QB1 1528 aa45.09■■■■■ 4.81
TRAF3IP1-203ENST00000409739 MST1RQ04912 1400 aa45.09■■■■■ 4.81
TRAF3IP1-203ENST00000409739 L3MBTL2Q969R5 705 aa45.08■■■■■ 4.81
TRAF3IP1-203ENST00000409739 PLEKHH1Q9ULM0 1364 aa45.07■■■■■ 4.81
TRAF3IP1-203ENST00000409739 CDC42BPGQ6DT37 1551 aa45.07■■■■■ 4.81
TRAF3IP1-203ENST00000409739 WAPLQ7Z5K2 1190 aa45.05■■■■■ 4.8
TRAF3IP1-203ENST00000409739 PHLPP1O60346 1717 aa45.02■■■■■ 4.8
TRAF3IP1-203ENST00000409739 ARHGEF28Q8N1W1 1705 aaKnown RBP45.02■■■■■ 4.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms