RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PLA2R1Q13018 1463 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 NEO1Q92859 1461 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 ATP7AQ04656 1500 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 CCER2I3L3R5 266 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 RGL3Q3MIN7 710 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 SPATA31E1Q6ZUB1 1445 aa8.74□□□□□ -1.01
GTF3C3-202ENST00000409364 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
GTF3C3-202ENST00000409364 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
GTF3C3-202ENST00000409364 IQGAP3Q86VI3 1631 aa8.73□□□□□ -1.01
GTF3C3-202ENST00000409364 MLH3Q9UHC1 1453 aa8.73□□□□□ -1.01
GTF3C3-202ENST00000409364 ARID4BQ4LE39 1312 aaPredicted RBP8.73□□□□□ -1.01
GTF3C3-202ENST00000409364 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
GTF3C3-202ENST00000409364 POGZQ7Z3K3 1410 aa8.72□□□□□ -1.01
GTF3C3-202ENST00000409364 CFAP74Q9C0B2 1584 aa8.71□□□□□ -1.01
GTF3C3-202ENST00000409364 CCDC7Q96M83 1385 aa8.71□□□□□ -1.01
GTF3C3-202ENST00000409364 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-202ENST00000409364 RAPGEF3O95398 923 aa8.71□□□□□ -1.02
GTF3C3-202ENST00000409364 INO80Q9ULG1 1556 aaPredicted RBP8.71□□□□□ -1.02
GTF3C3-202ENST00000409364 USP47Q96K76 1375 aa8.7□□□□□ -1.02
GTF3C3-202ENST00000409364 PTPRTO14522 1441 aa8.7□□□□□ -1.02
GTF3C3-202ENST00000409364 A2MP01023 1474 aa8.7□□□□□ -1.02
GTF3C3-202ENST00000409364 RALGAPBQ86X10 1494 aa8.7□□□□□ -1.02
GTF3C3-202ENST00000409364 FOXD4L1Q9NU39 408 aa8.69□□□□□ -1.02
GTF3C3-202ENST00000409364 GLI2P10070 1586 aa8.69□□□□□ -1.02
GTF3C3-202ENST00000409364 GGT6Q6P531 493 aa8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 ROCK2O75116 1388 aaKnown RBP8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 KIF7Q2M1P5 1343 aa8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 KDM5CP41229 1560 aa8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 DIP2BQ9P265 1576 aa8.68□□□□□ -1.02
GTF3C3-202ENST00000409364 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
GTF3C3-202ENST00000409364 VWDEQ8N2E2 1590 aa8.67□□□□□ -1.02
GTF3C3-202ENST00000409364 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
GTF3C3-202ENST00000409364 EIF2AK4Q9P2K8 1649 aaKnown RBP8.66□□□□□ -1.02
GTF3C3-202ENST00000409364 GPRASP1Q5JY77 1395 aa8.66□□□□□ -1.02
GTF3C3-202ENST00000409364 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
GTF3C3-202ENST00000409364 NBPF1Q3BBV0 1214 aa8.66□□□□□ -1.02
GTF3C3-202ENST00000409364 MS4A3Q96HJ5 214 aa8.66□□□□□ -1.02
GTF3C3-202ENST00000409364 KIDINS220Q9ULH0 1771 aa8.65□□□□□ -1.02
GTF3C3-202ENST00000409364 LMTK2Q8IWU2 1503 aa8.65□□□□□ -1.02
GTF3C3-202ENST00000409364 CNTLNQ9NXG0 1405 aa8.65□□□□□ -1.02
GTF3C3-202ENST00000409364 KIF13AQ9H1H9 1805 aa8.65□□□□□ -1.02
GTF3C3-202ENST00000409364 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-202ENST00000409364 PRDM15P57071 1507 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-202ENST00000409364 MAP3K4Q9Y6R4 1608 aa8.64□□□□□ -1.03
GTF3C3-202ENST00000409364 TRPM2O94759 1503 aa8.64□□□□□ -1.03
GTF3C3-202ENST00000409364 PRKRIP1Q9H875 184 aaPredicted RBP8.63□□□□□ -1.03
GTF3C3-202ENST00000409364 TET3O43151 1660 aa8.63□□□□□ -1.03
GTF3C3-202ENST00000409364 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
GTF3C3-202ENST00000409364 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
GTF3C3-202ENST00000409364 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
GTF3C3-202ENST00000409364 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
GTF3C3-202ENST00000409364 TSPOAP1O95153 1857 aa8.61□□□□□ -1.03
GTF3C3-202ENST00000409364 E9PCH4 1651 aa8.61□□□□□ -1.03
GTF3C3-202ENST00000409364 MROH1Q8NDA8 1641 aa8.61□□□□□ -1.03
GTF3C3-202ENST00000409364 NEURL4Q96JN8 1562 aa8.61□□□□□ -1.03
GTF3C3-202ENST00000409364 TMF1P82094 1093 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 SLC52A1Q9NWF4 448 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 RNF17Q9BXT8 1623 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 NPATQ14207 1427 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 TESK2Q96S53 571 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 EFCAB6Q5THR3 1501 aa8.6□□□□□ -1.03
GTF3C3-202ENST00000409364 YEATS2Q9ULM3 1422 aa8.59□□□□□ -1.03
GTF3C3-202ENST00000409364 SNPHO15079 494 aa8.59□□□□□ -1.03
GTF3C3-202ENST00000409364 SEC24BO95487 1268 aa8.58□□□□□ -1.04
GTF3C3-202ENST00000409364 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
GTF3C3-202ENST00000409364 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
GTF3C3-202ENST00000409364 DIP2CQ9Y2E4 1556 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 SPHKAPQ2M3C7 1700 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 ABCA6Q8N139 1617 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 NOS1P29475 1434 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 ADGRF5Q8IZF2 1346 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 CLTCL1P53675 1640 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 TRPM1Q7Z4N2 1603 aa8.57□□□□□ -1.04
GTF3C3-202ENST00000409364 ABCC3O15438 1527 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 ZMYM4Q5VZL5 1548 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 EIF3AQ14152 1382 aaKnown RBP8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 LAMC1P11047 1609 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 IDI1Q13907 227 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 RALBP1Q15311 655 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 C14orf93Q9H972 538 aaKnown RBP8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 RICTORQ6R327 1708 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 MYOM2P54296 1465 aa8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 SCAF11Q99590 1463 aaKnown RBP8.56□□□□□ -1.04
GTF3C3-202ENST00000409364 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms