RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NCBP3Q53F19 620 aaKnown RBP6.29□□□□□ -1.4
SCN3A-203ENST00000409101 RBM42Q9BTD8 480 aaKnown RBP6.29□□□□□ -1.4
SCN3A-203ENST00000409101 BICRAQ9NZM4 1560 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PMFBP1Q8TBY8 1022 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TROQ12816 1431 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 C9orf84Q5VXU9 1444 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 ERICH3Q5RHP9 1530 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TRIM6-TRIM34B2RNG4 842 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TATP17735 454 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 ANP32EQ9BTT0 268 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 RRP7AQ9Y3A4 280 aaKnown RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 NLRP13Q86W25 1043 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 GRIN2AQ12879 1464 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 LRRC9Q6ZRR7 1453 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PLEKHO1Q53GL0 409 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PRAM1Q96QH2 718 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 USP47Q96K76 1375 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 RAD21O60216 631 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 KIF6Q6ZMV9 814 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-203ENST00000409101 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 SLC26A8Q96RN1 970 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 ABCA10Q8WWZ4 1543 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 HSCBQ8IWL3 235 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
SCN3A-203ENST00000409101 TEX14Q8IWB6 1497 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 PPP6R1Q9UPN7 881 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 ADGRL1O94910 1474 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 MARCH6O60337 910 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PPP4R2Q9NY27 417 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PRDM11Q9NQV5 511 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 EPRSP07814 1512 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 LRRFIP1Q32MZ4 808 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 NECTIN2Q92692 538 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 RPGRIP1LQ68CZ1 1315 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 ELL2O00472 640 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PTMAP06454 111 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 TSPYL4Q9UJ04 414 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 SPG7Q9UQ90 795 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PLB1Q6P1J6 1458 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 TCEAL9Q9UHQ7 104 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 DENND4BO75064 1496 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 DDX54Q8TDD1 881 aaKnown RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CDK19Q9BWU1 502 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RCAN3Q9UKA8 241 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CUL7Q14999 1698 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RTEL1-TNFRSF6BF6WH68 1400 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CABP4P57796 275 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 ZNF692Q9BU19 519 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 NBR1Q14596 966 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 GGNBP2Q9H3C7 697 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 RIPK4P57078 832 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 ERBINQ96RT1 1412 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 RASSF8Q8NHQ8 419 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 KIF14Q15058 1648 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-203ENST00000409101 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 HTATSF1O43719 755 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 TOM1O60784 492 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 HMOX1P09601 288 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 ADAMTS2O95450 1211 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 AIMP1Q12904 312 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 NGLY1Q96IV0 654 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 LRPPRCP42704 1394 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 URB2Q14146 1524 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 HFM1A2PYH4 1435 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 PLCB2Q00722 1185 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 ARHGEF11O15085 1522 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 NRDCO43847 1150 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 G3BP1Q13283 466 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 AKAP17AQ02040 695 aaKnown RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 FKBP5Q13451 457 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 SYNE3Q6ZMZ3 975 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 GNAI1P63096 354 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 TRIM44Q96DX7 344 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 E9PSI1 815 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 CCDC34Q96HJ3 373 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 ROCK1Q13464 1354 aa6.21□□□□□ -1.41
SCN3A-203ENST00000409101 DHX16O60231 1041 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 CCDC141Q6ZP82 1450 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 APPP05067 770 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 CCAR1Q8IX12 1150 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 RUNDC1Q96C34 613 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 SUPT6HQ7KZ85 1726 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 KCNH5Q8NCM2 988 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 CABP1Q9NZU7 370 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 FANCAO15360 1455 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms