RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 TRIM52Q96A61 297 aa11.71□□□□□ -0.54
NFIA-208ENST00000407417 UBR1Q8IWV7 1749 aa11.7□□□□□ -0.54
NFIA-208ENST00000407417 CCER2I3L3R5 266 aa11.7□□□□□ -0.54
NFIA-208ENST00000407417 BCANQ96GW7 911 aa11.7□□□□□ -0.54
NFIA-208ENST00000407417 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
NFIA-208ENST00000407417 NEURL4Q96JN8 1562 aa11.7□□□□□ -0.54
NFIA-208ENST00000407417 LTKP29376 864 aa11.68□□□□□ -0.54
NFIA-208ENST00000407417 SLC52A1Q9NWF4 448 aa11.68□□□□□ -0.54
NFIA-208ENST00000407417 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
NFIA-208ENST00000407417 POLR1AO95602 1720 aaPredicted RBP11.67□□□□□ -0.54
NFIA-208ENST00000407417 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
NFIA-208ENST00000407417 TXNDC2Q86VQ3 553 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 SLIT1O75093 1534 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
NFIA-208ENST00000407417 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
NFIA-208ENST00000407417 MED14O60244 1454 aa11.65□□□□□ -0.54
NFIA-208ENST00000407417 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.54
NFIA-208ENST00000407417 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.55
NFIA-208ENST00000407417 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
NFIA-208ENST00000407417 SENP3Q9H4L4 574 aaPredicted RBP11.64□□□□□ -0.55
NFIA-208ENST00000407417 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
NFIA-208ENST00000407417 EID1Q9Y6B2 187 aa11.63□□□□□ -0.55
NFIA-208ENST00000407417 FOXD1Q16676 465 aa11.63□□□□□ -0.55
NFIA-208ENST00000407417 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
NFIA-208ENST00000407417 KDM5AP29375 1690 aaKnown RBP11.62□□□□□ -0.55
NFIA-208ENST00000407417 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
NFIA-208ENST00000407417 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
NFIA-208ENST00000407417 RAB3GAP2Q9H2M9 1393 aa11.62□□□□□ -0.55
NFIA-208ENST00000407417 NUTM2DQ5VT03 806 aaPredicted RBP11.62□□□□□ -0.55
NFIA-208ENST00000407417 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
NFIA-208ENST00000407417 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
NFIA-208ENST00000407417 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
NFIA-208ENST00000407417 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
NFIA-208ENST00000407417 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
NFIA-208ENST00000407417 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
NFIA-208ENST00000407417 TRPM2O94759 1503 aa11.6□□□□□ -0.55
NFIA-208ENST00000407417 CLTCL1P53675 1640 aa11.59□□□□□ -0.55
NFIA-208ENST00000407417 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
NFIA-208ENST00000407417 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
NFIA-208ENST00000407417 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
NFIA-208ENST00000407417 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
NFIA-208ENST00000407417 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
NFIA-208ENST00000407417 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
NFIA-208ENST00000407417 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
NFIA-208ENST00000407417 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
NFIA-208ENST00000407417 PPP4R2Q9NY27 417 aa11.55□□□□□ -0.56
NFIA-208ENST00000407417 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
NFIA-208ENST00000407417 STRCP1A6NGW2 1772 aa11.55□□□□□ -0.56
NFIA-208ENST00000407417 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
NFIA-208ENST00000407417 CPS1P31327 1500 aa11.54□□□□□ -0.56
NFIA-208ENST00000407417 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.57
NFIA-208ENST00000407417 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.57
NFIA-208ENST00000407417 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
NFIA-208ENST00000407417 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
NFIA-208ENST00000407417 NEXMIFQ5QGS0 1516 aa11.51□□□□□ -0.57
NFIA-208ENST00000407417 WASHC2AQ641Q2 1341 aa11.51□□□□□ -0.57
NFIA-208ENST00000407417 KIF1BO60333 1816 aa11.5□□□□□ -0.57
NFIA-208ENST00000407417 UBAP1LF5GYI3 381 aa11.5□□□□□ -0.57
NFIA-208ENST00000407417 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
NFIA-208ENST00000407417 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
NFIA-208ENST00000407417 KCNA6P17658 529 aa11.5□□□□□ -0.57
NFIA-208ENST00000407417 TBX22Q9Y458 520 aa11.5□□□□□ -0.57
NFIA-208ENST00000407417 ANP32CO43423 234 aa11.49□□□□□ -0.57
NFIA-208ENST00000407417 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
NFIA-208ENST00000407417 NRXN3Q9Y4C0 1643 aa11.47□□□□□ -0.57
NFIA-208ENST00000407417 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
NFIA-208ENST00000407417 PROSER2Q86WR7 435 aaPredicted RBP11.47□□□□□ -0.57
NFIA-208ENST00000407417 NWD1Q149M9 1564 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 SETBP1Q9Y6X0 1596 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 ANKRD30BQ9BXX2 1392 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 RPGRIP1LQ68CZ1 1315 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
NFIA-208ENST00000407417 IPO9Q96P70 1041 aaKnown RBP11.46□□□□□ -0.57
NFIA-208ENST00000407417 DIP2AQ14689 1571 aa11.46□□□□□ -0.58
NFIA-208ENST00000407417 METP08581 1390 aa11.46□□□□□ -0.58
NFIA-208ENST00000407417 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
NFIA-208ENST00000407417 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
NFIA-208ENST00000407417 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
NFIA-208ENST00000407417 ALKQ9UM73 1620 aa11.44□□□□□ -0.58
NFIA-208ENST00000407417 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
NFIA-208ENST00000407417 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
NFIA-208ENST00000407417 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
NFIA-208ENST00000407417 TOM1O60784 492 aa11.44□□□□□ -0.58
NFIA-208ENST00000407417 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
NFIA-208ENST00000407417 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
NFIA-208ENST00000407417 PPLO60437 1756 aa11.43□□□□□ -0.58
NFIA-208ENST00000407417 IL27Q8NEV9 243 aa11.43□□□□□ -0.58
NFIA-208ENST00000407417 PIK3R4Q99570 1358 aa11.43□□□□□ -0.58
NFIA-208ENST00000407417 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
NFIA-208ENST00000407417 NBR1Q14596 966 aa11.42□□□□□ -0.58
NFIA-208ENST00000407417 PKNOX2Q96KN3 472 aa11.42□□□□□ -0.58
NFIA-208ENST00000407417 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
NFIA-208ENST00000407417 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
NFIA-208ENST00000407417 SOCS7O14512 581 aa11.41□□□□□ -0.58
NFIA-208ENST00000407417 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms