RNA–Protein interactions for RNA: ENST00000405557.5

POLR2F-202, Transcript of RNA polymerase II subunit F, humanhuman

TSL 5 BASIC

Gene POLR2F, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-202ENST00000405557 IFT172Q9UG01 1749 aa19.33■□□□□ 0.68
POLR2F-202ENST00000405557 MED14O60244 1454 aa19.33■□□□□ 0.68
POLR2F-202ENST00000405557 SCAF11Q99590 1463 aaKnown RBP19.33■□□□□ 0.68
POLR2F-202ENST00000405557 TXNDC2Q86VQ3 553 aa19.32■□□□□ 0.68
POLR2F-202ENST00000405557 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
POLR2F-202ENST00000405557 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
POLR2F-202ENST00000405557 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
POLR2F-202ENST00000405557 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
POLR2F-202ENST00000405557 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
POLR2F-202ENST00000405557 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
POLR2F-202ENST00000405557 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
POLR2F-202ENST00000405557 RPGRIP1LQ68CZ1 1315 aa19.26■□□□□ 0.67
POLR2F-202ENST00000405557 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.26■□□□□ 0.67
POLR2F-202ENST00000405557 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
POLR2F-202ENST00000405557 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
POLR2F-202ENST00000405557 HDGFP51858 240 aaKnown RBP19.24■□□□□ 0.67
POLR2F-202ENST00000405557 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
POLR2F-202ENST00000405557 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
POLR2F-202ENST00000405557 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
POLR2F-202ENST00000405557 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
POLR2F-202ENST00000405557 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
POLR2F-202ENST00000405557 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
POLR2F-202ENST00000405557 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
POLR2F-202ENST00000405557 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
POLR2F-202ENST00000405557 MYOM2P54296 1465 aa19.19■□□□□ 0.66
POLR2F-202ENST00000405557 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
POLR2F-202ENST00000405557 SETD1AO15047 1707 aaKnown RBP19.19■□□□□ 0.66
POLR2F-202ENST00000405557 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
POLR2F-202ENST00000405557 SLC26A8Q96RN1 970 aa19.17■□□□□ 0.66
POLR2F-202ENST00000405557 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
POLR2F-202ENST00000405557 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
POLR2F-202ENST00000405557 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
POLR2F-202ENST00000405557 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
POLR2F-202ENST00000405557 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
POLR2F-202ENST00000405557 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
POLR2F-202ENST00000405557 ALKQ9UM73 1620 aa19.14■□□□□ 0.66
POLR2F-202ENST00000405557 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
POLR2F-202ENST00000405557 BCANQ96GW7 911 aa19.13■□□□□ 0.65
POLR2F-202ENST00000405557 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
POLR2F-202ENST00000405557 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
POLR2F-202ENST00000405557 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
POLR2F-202ENST00000405557 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
POLR2F-202ENST00000405557 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
POLR2F-202ENST00000405557 METP08581 1390 aa19.1■□□□□ 0.65
POLR2F-202ENST00000405557 PTPRUQ92729 1446 aa19.08■□□□□ 0.65
POLR2F-202ENST00000405557 NWD1Q149M9 1564 aa19.08■□□□□ 0.65
POLR2F-202ENST00000405557 C14orf93Q9H972 538 aaKnown RBP19.08■□□□□ 0.64
POLR2F-202ENST00000405557 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.64
POLR2F-202ENST00000405557 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.64
POLR2F-202ENST00000405557 LAMC1P11047 1609 aa19.07■□□□□ 0.64
POLR2F-202ENST00000405557 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
POLR2F-202ENST00000405557 PIK3R4Q99570 1358 aa19.06■□□□□ 0.64
POLR2F-202ENST00000405557 CFAP70Q5T0N1 1121 aa19.06■□□□□ 0.64
POLR2F-202ENST00000405557 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
POLR2F-202ENST00000405557 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
POLR2F-202ENST00000405557 KCNA6P17658 529 aa19.04■□□□□ 0.64
POLR2F-202ENST00000405557 ADGRB1O14514 1584 aa19.03■□□□□ 0.64
POLR2F-202ENST00000405557 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
POLR2F-202ENST00000405557 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.63
POLR2F-202ENST00000405557 CPS1P31327 1500 aa19.01■□□□□ 0.63
POLR2F-202ENST00000405557 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
POLR2F-202ENST00000405557 TMEM132EQ6IEE7 984 aa19.01■□□□□ 0.63
POLR2F-202ENST00000405557 TIMELESSQ9UNS1 1208 aa19.01■□□□□ 0.63
POLR2F-202ENST00000405557 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
POLR2F-202ENST00000405557 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
POLR2F-202ENST00000405557 NKTRP30414 1462 aaKnown RBP18.99■□□□□ 0.63
POLR2F-202ENST00000405557 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
POLR2F-202ENST00000405557 LRPPRCP42704 1394 aaKnown RBP18.97■□□□□ 0.63
POLR2F-202ENST00000405557 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
POLR2F-202ENST00000405557 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
POLR2F-202ENST00000405557 ABCC11Q96J66 1382 aa18.95■□□□□ 0.62
POLR2F-202ENST00000405557 TECPR2O15040 1411 aa18.95■□□□□ 0.62
POLR2F-202ENST00000405557 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
POLR2F-202ENST00000405557 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
POLR2F-202ENST00000405557 CERKQ8TCT0 537 aa18.93■□□□□ 0.62
POLR2F-202ENST00000405557 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
POLR2F-202ENST00000405557 STK26Q9P289 416 aa18.93■□□□□ 0.62
POLR2F-202ENST00000405557 PROSER2Q86WR7 435 aaPredicted RBP18.92■□□□□ 0.62
POLR2F-202ENST00000405557 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
POLR2F-202ENST00000405557 RALGAPBQ86X10 1494 aa18.91■□□□□ 0.62
POLR2F-202ENST00000405557 ARHGEF28Q8N1W1 1705 aaKnown RBP18.91■□□□□ 0.62
POLR2F-202ENST00000405557 DLC1Q96QB1 1528 aa18.9■□□□□ 0.62
POLR2F-202ENST00000405557 GPRASP1Q5JY77 1395 aa18.9■□□□□ 0.62
POLR2F-202ENST00000405557 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
POLR2F-202ENST00000405557 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
POLR2F-202ENST00000405557 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
POLR2F-202ENST00000405557 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
POLR2F-202ENST00000405557 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
POLR2F-202ENST00000405557 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
POLR2F-202ENST00000405557 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
POLR2F-202ENST00000405557 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
POLR2F-202ENST00000405557 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
POLR2F-202ENST00000405557 WAPLQ7Z5K2 1190 aa18.87■□□□□ 0.61
POLR2F-202ENST00000405557 ILDR1Q86SU0 546 aaPredicted RBP18.87■□□□□ 0.61
POLR2F-202ENST00000405557 PRAM1Q96QH2 718 aa18.83■□□□□ 0.6
POLR2F-202ENST00000405557 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
POLR2F-202ENST00000405557 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
POLR2F-202ENST00000405557 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
POLR2F-202ENST00000405557 MSH6P52701 1360 aa18.79■□□□□ 0.6
POLR2F-202ENST00000405557 SAFB2Q14151 953 aaKnown RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms