RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 PARD3Q8TEW0 1356 aa35.93■■■■□ 3.34
CGREF1-203ENST00000402394 WASHC2CQ9Y4E1 1318 aa35.93■■■■□ 3.34
CGREF1-203ENST00000402394 GGT6Q6P531 493 aa35.93■■■■□ 3.34
CGREF1-203ENST00000402394 DIP2BQ9P265 1576 aa35.92■■■■□ 3.34
CGREF1-203ENST00000402394 PNISRQ8TF01 805 aaKnown RBP35.92■■■■□ 3.34
CGREF1-203ENST00000402394 NRXN1Q9ULB1 1477 aa35.91■■■■□ 3.34
CGREF1-203ENST00000402394 TMC1Q8TDI8 760 aa35.91■■■■□ 3.34
CGREF1-203ENST00000402394 CAMSAP1Q5T5Y3 1602 aa35.87■■■■□ 3.33
CGREF1-203ENST00000402394 EIF3AQ14152 1382 aaKnown RBP35.87■■■■□ 3.33
CGREF1-203ENST00000402394 ADGRF5Q8IZF2 1346 aa35.85■■■■□ 3.33
CGREF1-203ENST00000402394 PANK3Q9H999 370 aa35.84■■■■□ 3.33
CGREF1-203ENST00000402394 LRPPRCP42704 1394 aaKnown RBP35.84■■■■□ 3.33
CGREF1-203ENST00000402394 BCANQ96GW7 911 aa35.83■■■■□ 3.33
CGREF1-203ENST00000402394 CDCA8Q53HL2 280 aa35.81■■■■□ 3.32
CGREF1-203ENST00000402394 NOS1P29475 1434 aa35.8■■■■□ 3.32
CGREF1-203ENST00000402394 NLRP13Q86W25 1043 aa35.8■■■■□ 3.32
CGREF1-203ENST00000402394 CFAP70Q5T0N1 1121 aa35.79■■■■□ 3.32
CGREF1-203ENST00000402394 YEATS2Q9ULM3 1422 aa35.78■■■■□ 3.32
CGREF1-203ENST00000402394 ZC3H13Q5T200 1668 aaKnown RBP35.78■■■■□ 3.32
CGREF1-203ENST00000402394 PPLO60437 1756 aa35.76■■■■□ 3.32
CGREF1-203ENST00000402394 SYNMO15061 1565 aa35.76■■■■□ 3.32
CGREF1-203ENST00000402394 ARHGAP31Q2M1Z3 1444 aa35.76■■■■□ 3.31
CGREF1-203ENST00000402394 ZMYM4Q5VZL5 1548 aa35.76■■■■□ 3.31
CGREF1-203ENST00000402394 SIGLEC1Q9BZZ2 1709 aa35.75■■■■□ 3.31
CGREF1-203ENST00000402394 CFAP65Q6ZU64 1925 aaKnown RBP35.75■■■■□ 3.31
CGREF1-203ENST00000402394 PIK3C2BO00750 1634 aa35.73■■■■□ 3.31
CGREF1-203ENST00000402394 SETBP1Q9Y6X0 1596 aa35.73■■■■□ 3.31
CGREF1-203ENST00000402394 RPGRIP1LQ68CZ1 1315 aa35.72■■■■□ 3.31
CGREF1-203ENST00000402394 SLC24A1O60721 1099 aa35.71■■■■□ 3.31
CGREF1-203ENST00000402394 PIK3C2GO75747 1445 aa35.7■■■■□ 3.31
CGREF1-203ENST00000402394 CHGAP10645 457 aaKnown RBP35.69■■■■□ 3.3
CGREF1-203ENST00000402394 SMG6Q86US8 1419 aaKnown RBP35.69■■■■□ 3.3
CGREF1-203ENST00000402394 TSPOAP1O95153 1857 aa35.69■■■■□ 3.3
CGREF1-203ENST00000402394 MYO3AQ8NEV4 1616 aa35.69■■■■□ 3.3
CGREF1-203ENST00000402394 CC2D1BQ5T0F9 858 aaKnown RBP35.67■■■■□ 3.3
CGREF1-203ENST00000402394 MYOM1P52179 1685 aa35.67■■■■□ 3.3
CGREF1-203ENST00000402394 KDM5AP29375 1690 aaKnown RBP35.66■■■■□ 3.3
CGREF1-203ENST00000402394 KIF13AQ9H1H9 1805 aa35.65■■■■□ 3.3
CGREF1-203ENST00000402394 SBNO2Q9Y2G9 1366 aa35.63■■■■□ 3.29
CGREF1-203ENST00000402394 ERVK-7P63135 1459 aa35.62■■■■□ 3.29
CGREF1-203ENST00000402394 ERICH6BQ5W0A0 696 aa35.62■■■■□ 3.29
CGREF1-203ENST00000402394 C14orf93Q9H972 538 aaKnown RBP35.61■■■■□ 3.29
CGREF1-203ENST00000402394 ADGRB1O14514 1584 aa35.59■■■■□ 3.29
CGREF1-203ENST00000402394 KNSTRNQ9Y448 316 aa35.59■■■■□ 3.29
CGREF1-203ENST00000402394 INSRP06213 1382 aa35.58■■■■□ 3.29
CGREF1-203ENST00000402394 NUDCQ9Y266 331 aa35.57■■■■□ 3.29
CGREF1-203ENST00000402394 AMER1Q5JTC6 1135 aaPredicted RBP35.55■■■■□ 3.28
CGREF1-203ENST00000402394 NEXMIFQ5QGS0 1516 aa35.55■■■■□ 3.28
CGREF1-203ENST00000402394 ASXL1Q8IXJ9 1541 aa35.55■■■■□ 3.28
CGREF1-203ENST00000402394 REREQ9P2R6 1566 aa35.54■■■■□ 3.28
CGREF1-203ENST00000402394 NPC1L1Q9UHC9 1359 aa35.54■■■■□ 3.28
CGREF1-203ENST00000402394 IRX6P78412 446 aaPredicted RBP35.53■■■■□ 3.28
CGREF1-203ENST00000402394 SLC52A1Q9NWF4 448 aa35.51■■■■□ 3.28
CGREF1-203ENST00000402394 PREX1Q8TCU6 1659 aa35.51■■■■□ 3.27
CGREF1-203ENST00000402394 CENPJQ9HC77 1338 aaPredicted RBP35.51■■■■□ 3.27
CGREF1-203ENST00000402394 VGFO15240 615 aaPredicted RBP35.48■■■■□ 3.27
CGREF1-203ENST00000402394 IDI1Q13907 227 aa35.48■■■■□ 3.27
CGREF1-203ENST00000402394 AGLP35573 1532 aa35.47■■■■□ 3.27
CGREF1-203ENST00000402394 ZFYVE9O95405 1425 aa35.46■■■■□ 3.27
CGREF1-203ENST00000402394 BLMP54132 1417 aaPredicted RBP35.46■■■■□ 3.27
CGREF1-203ENST00000402394 TSHZ2Q9NRE2 1034 aa35.45■■■■□ 3.27
CGREF1-203ENST00000402394 DNAJC5Q9H3Z4 198 aa35.44■■■■□ 3.26
CGREF1-203ENST00000402394 QRICH2Q9H0J4 1663 aa35.43■■■■□ 3.26
CGREF1-203ENST00000402394 PPP2R1AP30153 589 aa35.43■■■■□ 3.26
CGREF1-203ENST00000402394 TRAK1Q9UPV9 953 aa35.42■■■■□ 3.26
CGREF1-203ENST00000402394 RNF123Q5XPI4 1314 aa35.42■■■■□ 3.26
CGREF1-203ENST00000402394 TMEM131LA2VDJ0 1609 aa35.41■■■■□ 3.26
CGREF1-203ENST00000402394 SENP3-EIF4A1A0A087X0R7 540 aa35.4■■■■□ 3.26
CGREF1-203ENST00000402394 TMEM132EQ6IEE7 984 aa35.39■■■■□ 3.26
CGREF1-203ENST00000402394 PPP6R1Q9UPN7 881 aa35.39■■■■□ 3.26
CGREF1-203ENST00000402394 PPP4R2Q9NY27 417 aa35.38■■■■□ 3.25
CGREF1-203ENST00000402394 MYO5BQ9ULV0 1848 aa35.35■■■■□ 3.25
CGREF1-203ENST00000402394 PDE3BQ13370 1112 aa35.34■■■■□ 3.25
CGREF1-203ENST00000402394 NUTM2DQ5VT03 806 aaPredicted RBP35.33■■■■□ 3.25
CGREF1-203ENST00000402394 ARHGEF28Q8N1W1 1705 aaKnown RBP35.33■■■■□ 3.25
CGREF1-203ENST00000402394 CARD14Q9BXL6 1004 aa35.32■■■■□ 3.24
CGREF1-203ENST00000402394 FBXO31Q5XUX0 539 aaPredicted RBP35.28■■■■□ 3.24
CGREF1-203ENST00000402394 ARHGEF40Q8TER5 1519 aa35.26■■■■□ 3.24
CGREF1-203ENST00000402394 PUS7Q96PZ0 661 aaKnown RBP35.26■■■■□ 3.23
CGREF1-203ENST00000402394 CLTCQ00610 1675 aaKnown RBP35.25■■■■□ 3.23
CGREF1-203ENST00000402394 TRHP20396 242 aaPredicted RBP35.24■■■■□ 3.23
CGREF1-203ENST00000402394 ADAMTS8Q9UP79 889 aa35.24■■■■□ 3.23
CGREF1-203ENST00000402394 SPATA31D1Q6ZQQ2 1576 aa35.21■■■■□ 3.23
CGREF1-203ENST00000402394 WDR43Q15061 677 aaKnown RBP eCLIP35.2■■■■□ 3.23
CGREF1-203ENST00000402394 SALL2Q9Y467 1007 aaPredicted RBP35.2■■■■□ 3.23
CGREF1-203ENST00000402394 TULP4Q9NRJ4 1543 aa35.2■■■■□ 3.23
CGREF1-203ENST00000402394 EVC2Q86UK5 1308 aa35.18■■■■□ 3.22
CGREF1-203ENST00000402394 NSD3Q9BZ95 1437 aa35.16■■■■□ 3.22
CGREF1-203ENST00000402394 SLC12A5Q9H2X9 1139 aa35.16■■■■□ 3.22
CGREF1-203ENST00000402394 USP32Q8NFA0 1604 aa35.16■■■■□ 3.22
CGREF1-203ENST00000402394 PTPRMP28827 1452 aa35.11■■■■□ 3.21
CGREF1-203ENST00000402394 CDCA7LQ96GN5 454 aa35.1■■■■□ 3.21
CGREF1-203ENST00000402394 RCAN3Q9UKA8 241 aa35.1■■■■□ 3.21
CGREF1-203ENST00000402394 A2ML1A8K2U0 1454 aa35.09■■■■□ 3.21
CGREF1-203ENST00000402394 ALKQ9UM73 1620 aa35.09■■■■□ 3.21
CGREF1-203ENST00000402394 YTHDC2Q9H6S0 1430 aaKnown RBP35.08■■■■□ 3.21
CGREF1-203ENST00000402394 B4GALNT3Q6L9W6 998 aa35.08■■■■□ 3.21
CGREF1-203ENST00000402394 STAG3Q9UJ98 1225 aa35.08■■■■□ 3.21
CGREF1-203ENST00000402394 RRP1P56182 461 aaKnown RBP35.05■■■■□ 3.2
CGREF1-203ENST00000402394 ANKRD36BQ8N2N9 1353 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms