RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P7-201ENST00000400214 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P7-201ENST00000400214 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P7-201ENST00000400214 FAM117AQ9C073 453 aa8.11□□□□□ -1.11
HMGB3P7-201ENST00000400214 PLB1Q6P1J6 1458 aa8.11□□□□□ -1.11
HMGB3P7-201ENST00000400214 E9PSI1 815 aa8.1□□□□□ -1.11
HMGB3P7-201ENST00000400214 TRIM66O15016 1216 aa8.1□□□□□ -1.11
HMGB3P7-201ENST00000400214 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
HMGB3P7-201ENST00000400214 RNF166Q96A37 237 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P7-201ENST00000400214 RAPGEF6Q8TEU7 1601 aa8.1□□□□□ -1.11
HMGB3P7-201ENST00000400214 E2F4Q16254 413 aa8.09□□□□□ -1.11
HMGB3P7-201ENST00000400214 PCDHB8Q9UN66 801 aa8.09□□□□□ -1.11
HMGB3P7-201ENST00000400214 GLI2P10070 1586 aa8.09□□□□□ -1.11
HMGB3P7-201ENST00000400214 PYGBP11216 843 aa8.08□□□□□ -1.12
HMGB3P7-201ENST00000400214 ASXL2Q76L83 1435 aa8.08□□□□□ -1.12
HMGB3P7-201ENST00000400214 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
HMGB3P7-201ENST00000400214 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
HMGB3P7-201ENST00000400214 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
HMGB3P7-201ENST00000400214 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P7-201ENST00000400214 ARHGAP35Q9NRY4 1499 aa8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 FHOD3Q2V2M9 1422 aa8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 HOXB3P14651 431 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 IRF5Q13568 498 aa8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 USP35Q9P2H5 1018 aa8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
HMGB3P7-201ENST00000400214 PPRC1Q5VV67 1664 aaKnown RBP8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 MAP3K4Q9Y6R4 1608 aa8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 ATP10BO94823 1461 aa8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 NUP153P49790 1475 aaKnown RBP8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 WDR7Q9Y4E6 1490 aa8.05□□□□□ -1.12
HMGB3P7-201ENST00000400214 FMN1Q68DA7 1419 aa8.04□□□□□ -1.12
HMGB3P7-201ENST00000400214 EPRSP07814 1512 aaKnown RBP8.04□□□□□ -1.12
HMGB3P7-201ENST00000400214 FAM69CQ0P6D2 419 aa8.04□□□□□ -1.12
HMGB3P7-201ENST00000400214 CFAP43Q8NDM7 1665 aa8.04□□□□□ -1.12
HMGB3P7-201ENST00000400214 HOXB1P14653 301 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P7-201ENST00000400214 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
HMGB3P7-201ENST00000400214 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
HMGB3P7-201ENST00000400214 CCDC97Q96F63 343 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P7-201ENST00000400214 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
HMGB3P7-201ENST00000400214 HECW1Q76N89 1606 aa8.02□□□□□ -1.13
HMGB3P7-201ENST00000400214 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
HMGB3P7-201ENST00000400214 GPIHBP1Q8IV16 184 aa8.01□□□□□ -1.13
HMGB3P7-201ENST00000400214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMGB3P7-201ENST00000400214 ABCA9Q8IUA7 1624 aa8□□□□□ -1.13
HMGB3P7-201ENST00000400214 MYT1LQ9UL68 1186 aa8□□□□□ -1.13
HMGB3P7-201ENST00000400214 CLIP1P30622 1438 aa8□□□□□ -1.13
HMGB3P7-201ENST00000400214 GOLGA2Q08379 1002 aa7.99□□□□□ -1.13
HMGB3P7-201ENST00000400214 ZNF467Q7Z7K2 595 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P7-201ENST00000400214 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
HMGB3P7-201ENST00000400214 CASKIN1Q8WXD9 1431 aa7.98□□□□□ -1.13
HMGB3P7-201ENST00000400214 PROSER2Q86WR7 435 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P7-201ENST00000400214 ERBB3P21860 1342 aa7.98□□□□□ -1.13
HMGB3P7-201ENST00000400214 PCF11O94913 1555 aaKnown RBP7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 FAM177A1Q8N128 213 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 DDRGK1Q96HY6 314 aa7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 TEX14Q8IWB6 1497 aa7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 FYCO1Q9BQS8 1478 aa7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 CDK13Q14004 1512 aaKnown RBP7.97□□□□□ -1.13
HMGB3P7-201ENST00000400214 KDM6BO15054 1643 aa7.96□□□□□ -1.13
HMGB3P7-201ENST00000400214 CEP162Q5TB80 1403 aa7.96□□□□□ -1.13
HMGB3P7-201ENST00000400214 CCDC18Q5T9S5 1454 aa7.96□□□□□ -1.13
HMGB3P7-201ENST00000400214 MCM6Q14566 821 aa7.96□□□□□ -1.14
HMGB3P7-201ENST00000400214 CD109Q6YHK3 1445 aa7.95□□□□□ -1.14
HMGB3P7-201ENST00000400214 PLEKHD1A6NEE1 506 aa7.95□□□□□ -1.14
HMGB3P7-201ENST00000400214 CHRM1P11229 460 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P7-201ENST00000400214 RSPH4AQ5TD94 716 aa7.95□□□□□ -1.14
HMGB3P7-201ENST00000400214 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
HMGB3P7-201ENST00000400214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGB3P7-201ENST00000400214 PTGER2P43116 358 aa7.94□□□□□ -1.14
HMGB3P7-201ENST00000400214 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
HMGB3P7-201ENST00000400214 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P7-201ENST00000400214 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
HMGB3P7-201ENST00000400214 MYO5CQ9NQX4 1742 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 VARS2Q5ST30 1063 aaKnown RBP7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 DPY19L2Q6NUT2 758 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 DHX37Q8IY37 1157 aaKnown RBP7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 BOLA1Q9Y3E2 137 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 PHLDB1Q86UU1 1377 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 TTC37Q6PGP7 1564 aa7.93□□□□□ -1.14
HMGB3P7-201ENST00000400214 TROQ12816 1431 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P7-201ENST00000400214 NEO1Q92859 1461 aa7.92□□□□□ -1.14
HMGB3P7-201ENST00000400214 COL17A1Q9UMD9 1497 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P7-201ENST00000400214 CFAP74Q9C0B2 1584 aa7.92□□□□□ -1.14
HMGB3P7-201ENST00000400214 MLLT3P42568 568 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P7-201ENST00000400214 PSEN1P49768 467 aa7.91□□□□□ -1.14
HMGB3P7-201ENST00000400214 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
HMGB3P7-201ENST00000400214 KIF14Q15058 1648 aa7.91□□□□□ -1.14
HMGB3P7-201ENST00000400214 CDC42BPBQ9Y5S2 1711 aa7.91□□□□□ -1.14
HMGB3P7-201ENST00000400214 CDC42BPAQ5VT25 1732 aa7.89□□□□□ -1.15
HMGB3P7-201ENST00000400214 POLR3GLQ9BT43 218 aa7.89□□□□□ -1.15
HMGB3P7-201ENST00000400214 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
HMGB3P7-201ENST00000400214 AMOTL2Q9Y2J4 779 aa7.89□□□□□ -1.15
HMGB3P7-201ENST00000400214 RICTORQ6R327 1708 aa7.89□□□□□ -1.15
HMGB3P7-201ENST00000400214 PLCH2O75038 1416 aa7.88□□□□□ -1.15
HMGB3P7-201ENST00000400214 VPS8Q8N3P4 1428 aa7.88□□□□□ -1.15
HMGB3P7-201ENST00000400214 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms