RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
NPRL3-201ENST00000399953 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.93
NPRL3-201ENST00000399953 PZPP20742 1482 aa20.89■□□□□ 0.93
NPRL3-201ENST00000399953 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
NPRL3-201ENST00000399953 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
NPRL3-201ENST00000399953 KIF20AO95235 890 aa20.88■□□□□ 0.93
NPRL3-201ENST00000399953 HSCBQ8IWL3 235 aa20.88■□□□□ 0.93
NPRL3-201ENST00000399953 NOL7Q9UMY1 257 aaKnown RBP20.87■□□□□ 0.93
NPRL3-201ENST00000399953 ADAMTS8Q9UP79 889 aa20.87■□□□□ 0.93
NPRL3-201ENST00000399953 CSPP1Q1MSJ5 1256 aa20.87■□□□□ 0.93
NPRL3-201ENST00000399953 GTPBP4Q9BZE4 634 aaKnown RBP20.87■□□□□ 0.93
NPRL3-201ENST00000399953 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
NPRL3-201ENST00000399953 SLFN5Q08AF3 891 aa20.86■□□□□ 0.93
NPRL3-201ENST00000399953 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
NPRL3-201ENST00000399953 TNPO1Q92973 898 aaKnown RBP20.86■□□□□ 0.93
NPRL3-201ENST00000399953 RTEL1-TNFRSF6BF6WH68 1400 aa20.85■□□□□ 0.93
NPRL3-201ENST00000399953 DDIT3P35638 169 aa20.85■□□□□ 0.93
NPRL3-201ENST00000399953 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
NPRL3-201ENST00000399953 KIAA1107Q9UPP5 1409 aa20.85■□□□□ 0.93
NPRL3-201ENST00000399953 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
NPRL3-201ENST00000399953 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
NPRL3-201ENST00000399953 DAPK1P53355 1430 aa20.84■□□□□ 0.93
NPRL3-201ENST00000399953 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
NPRL3-201ENST00000399953 PDE3AQ14432 1141 aa20.84■□□□□ 0.93
NPRL3-201ENST00000399953 SASS6Q6UVJ0 657 aa20.84■□□□□ 0.93
NPRL3-201ENST00000399953 NKTRP30414 1462 aaKnown RBP20.84■□□□□ 0.93
NPRL3-201ENST00000399953 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.93
NPRL3-201ENST00000399953 CIZ1Q9ULV3 898 aaPredicted RBP20.83■□□□□ 0.93
NPRL3-201ENST00000399953 PRDM2Q13029 1718 aa20.83■□□□□ 0.92
NPRL3-201ENST00000399953 BCAR3O75815 825 aa20.83■□□□□ 0.92
NPRL3-201ENST00000399953 NINLQ9Y2I6 1382 aa20.83■□□□□ 0.92
NPRL3-201ENST00000399953 IPO4Q8TEX9 1081 aaKnown RBP20.82■□□□□ 0.92
NPRL3-201ENST00000399953 CHMP4BQ9H444 224 aaKnown RBP20.82■□□□□ 0.92
NPRL3-201ENST00000399953 LETM1O95202 739 aaPredicted RBP20.82■□□□□ 0.92
NPRL3-201ENST00000399953 TRMT2AQ8IZ69 625 aaKnown RBP20.82■□□□□ 0.92
NPRL3-201ENST00000399953 ARHGEF12Q9NZN5 1544 aa20.82■□□□□ 0.92
NPRL3-201ENST00000399953 PMFBP1Q8TBY8 1022 aa20.81■□□□□ 0.92
NPRL3-201ENST00000399953 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
NPRL3-201ENST00000399953 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
NPRL3-201ENST00000399953 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
NPRL3-201ENST00000399953 DNMT1P26358 1616 aaKnown RBP20.79■□□□□ 0.92
NPRL3-201ENST00000399953 RAB3GAP1Q15042 981 aa20.79■□□□□ 0.92
NPRL3-201ENST00000399953 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.79■□□□□ 0.92
NPRL3-201ENST00000399953 MCM5P33992 734 aa20.78■□□□□ 0.92
NPRL3-201ENST00000399953 TMEM51Q9NW97 253 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 PDZRN3Q9UPQ7 1066 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 CUL7Q14999 1698 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 SMC5Q8IY18 1101 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 ZKSCAN5Q9Y2L8 839 aa20.77■□□□□ 0.92
NPRL3-201ENST00000399953 POLA1P09884 1462 aaPredicted RBP20.76■□□□□ 0.91
NPRL3-201ENST00000399953 MFAP1P55081 439 aaKnown RBP20.76■□□□□ 0.91
NPRL3-201ENST00000399953 COG6Q9Y2V7 657 aa20.76■□□□□ 0.91
NPRL3-201ENST00000399953 ABCC5O15440 1437 aa20.76■□□□□ 0.91
NPRL3-201ENST00000399953 PDLIM2Q96JY6 352 aa20.75■□□□□ 0.91
NPRL3-201ENST00000399953 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
NPRL3-201ENST00000399953 KLHL40Q2TBA0 621 aa20.73■□□□□ 0.91
NPRL3-201ENST00000399953 TAF3Q5VWG9 929 aa20.73■□□□□ 0.91
NPRL3-201ENST00000399953 SNX21Q969T3 373 aa20.73■□□□□ 0.91
NPRL3-201ENST00000399953 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
NPRL3-201ENST00000399953 PKD2Q13563 968 aa20.72■□□□□ 0.91
NPRL3-201ENST00000399953 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
NPRL3-201ENST00000399953 ZNF445P59923 1031 aa20.71■□□□□ 0.91
NPRL3-201ENST00000399953 E9PSI1 815 aa20.7■□□□□ 0.9
NPRL3-201ENST00000399953 CBX1P83916 185 aa20.7■□□□□ 0.9
NPRL3-201ENST00000399953 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
NPRL3-201ENST00000399953 PANK3Q9H999 370 aa20.69■□□□□ 0.9
NPRL3-201ENST00000399953 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
NPRL3-201ENST00000399953 DDX49Q9Y6V7 483 aaKnown RBP20.69■□□□□ 0.9
NPRL3-201ENST00000399953 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
NPRL3-201ENST00000399953 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
NPRL3-201ENST00000399953 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
NPRL3-201ENST00000399953 MYRIPQ8NFW9 859 aa20.68■□□□□ 0.9
NPRL3-201ENST00000399953 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
NPRL3-201ENST00000399953 RWDD1Q9H446 243 aaPredicted RBP20.67■□□□□ 0.9
NPRL3-201ENST00000399953 PLXNC1O60486 1568 aa20.67■□□□□ 0.9
NPRL3-201ENST00000399953 CAMSAP2Q08AD1 1489 aa20.66■□□□□ 0.9
NPRL3-201ENST00000399953 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
NPRL3-201ENST00000399953 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
NPRL3-201ENST00000399953 CLEC17AQ6ZS10 378 aa20.64■□□□□ 0.9
NPRL3-201ENST00000399953 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
NPRL3-201ENST00000399953 RBM25P49756 843 aaKnown RBP20.63■□□□□ 0.89
NPRL3-201ENST00000399953 ZNF710Q8N1W2 664 aa20.63■□□□□ 0.89
NPRL3-201ENST00000399953 RBSNQ9H1K0 784 aa20.63■□□□□ 0.89
NPRL3-201ENST00000399953 CEP170Q5SW79 1584 aa20.62■□□□□ 0.89
NPRL3-201ENST00000399953 ARHGAP31Q2M1Z3 1444 aa20.62■□□□□ 0.89
NPRL3-201ENST00000399953 ATP2B3Q16720 1220 aa20.61■□□□□ 0.89
NPRL3-201ENST00000399953 PRIMPOLQ96LW4 560 aa20.61■□□□□ 0.89
NPRL3-201ENST00000399953 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
NPRL3-201ENST00000399953 TRPM1Q7Z4N2 1603 aa20.61■□□□□ 0.89
NPRL3-201ENST00000399953 DISP3Q9P2K9 1392 aa20.6■□□□□ 0.89
NPRL3-201ENST00000399953 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
NPRL3-201ENST00000399953 ABCC2Q92887 1545 aa20.6■□□□□ 0.89
NPRL3-201ENST00000399953 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
NPRL3-201ENST00000399953 VGLL3A8MV65 326 aa20.59■□□□□ 0.89
NPRL3-201ENST00000399953 SSFA2P28290 1259 aa20.59■□□□□ 0.89
NPRL3-201ENST00000399953 HMGN5P82970 282 aaKnown RBP20.59■□□□□ 0.89
NPRL3-201ENST00000399953 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
NPRL3-201ENST00000399953 BAG4O95429 457 aaKnown RBP20.59■□□□□ 0.89
NPRL3-201ENST00000399953 GTF2F1P35269 517 aaKnown RBP eCLIP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms