RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
NPRL3-201ENST00000399953 PELP1Q8IZL8 1130 aaKnown RBP28.39■■■□□ 2.14
NPRL3-201ENST00000399953 HRCP23327 699 aa28.33■■■□□ 2.13
NPRL3-201ENST00000399953 MYT1Q01538 1121 aa27.54■■■□□ 2
NPRL3-201ENST00000399953 PPARGC1BQ86YN6 1023 aaKnown RBP27.54■■■□□ 2
NPRL3-201ENST00000399953 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
NPRL3-201ENST00000399953 SCAF1Q9H7N4 1312 aaKnown RBP27.07■■□□□ 1.92
NPRL3-201ENST00000399953 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
NPRL3-201ENST00000399953 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
NPRL3-201ENST00000399953 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
NPRL3-201ENST00000399953 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
NPRL3-201ENST00000399953 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
NPRL3-201ENST00000399953 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
NPRL3-201ENST00000399953 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
NPRL3-201ENST00000399953 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
NPRL3-201ENST00000399953 ACIN1Q9UKV3 1341 aaKnown RBP26.28■■□□□ 1.8
NPRL3-201ENST00000399953 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
NPRL3-201ENST00000399953 TTBK1Q5TCY1 1321 aaPredicted RBP26.05■■□□□ 1.76
NPRL3-201ENST00000399953 GTF3C3Q9Y5Q9 886 aa26.04■■□□□ 1.76
NPRL3-201ENST00000399953 LOC105371045A0A1W2PR82 267 aa25.92■■□□□ 1.74
NPRL3-201ENST00000399953 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
NPRL3-201ENST00000399953 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
NPRL3-201ENST00000399953 BCL11AQ9H165 835 aa25.47■■□□□ 1.67
NPRL3-201ENST00000399953 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
NPRL3-201ENST00000399953 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
NPRL3-201ENST00000399953 FAM9AQ8IZU1 332 aaPredicted RBP25.22■■□□□ 1.63
NPRL3-201ENST00000399953 CCER1Q8TC90 406 aaPredicted RBP25.14■■□□□ 1.62
NPRL3-201ENST00000399953 ANP32EQ9BTT0 268 aa25.14■■□□□ 1.62
NPRL3-201ENST00000399953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
NPRL3-201ENST00000399953 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
NPRL3-201ENST00000399953 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
NPRL3-201ENST00000399953 PRKCSHP14314 528 aaPredicted RBP24.88■■□□□ 1.57
NPRL3-201ENST00000399953 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
NPRL3-201ENST00000399953 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
NPRL3-201ENST00000399953 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
NPRL3-201ENST00000399953 TSHZ2Q9NRE2 1034 aa24.73■■□□□ 1.55
NPRL3-201ENST00000399953 MIER1Q8N108 512 aa24.72■■□□□ 1.55
NPRL3-201ENST00000399953 SUPT16HQ9Y5B9 1047 aaKnown RBP24.68■■□□□ 1.54
NPRL3-201ENST00000399953 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
NPRL3-201ENST00000399953 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
NPRL3-201ENST00000399953 ABCC9O60706 1549 aa24.24■■□□□ 1.47
NPRL3-201ENST00000399953 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
NPRL3-201ENST00000399953 APLP2Q06481 763 aa24.15■■□□□ 1.46
NPRL3-201ENST00000399953 RBM19Q9Y4C8 960 aaKnown RBP24.09■■□□□ 1.45
NPRL3-201ENST00000399953 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
NPRL3-201ENST00000399953 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
NPRL3-201ENST00000399953 BCANQ96GW7 911 aa23.95■■□□□ 1.42
NPRL3-201ENST00000399953 MSH5O43196 834 aa23.91■■□□□ 1.42
NPRL3-201ENST00000399953 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
NPRL3-201ENST00000399953 FKBP8Q14318 412 aa23.86■■□□□ 1.41
NPRL3-201ENST00000399953 CEP162Q5TB80 1403 aa23.83■■□□□ 1.41
NPRL3-201ENST00000399953 FANCIQ9NVI1 1328 aa23.77■■□□□ 1.4
NPRL3-201ENST00000399953 ANO8Q9HCE9 1232 aaPredicted RBP23.76■■□□□ 1.39
NPRL3-201ENST00000399953 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
NPRL3-201ENST00000399953 NEFLP07196 543 aa23.71■■□□□ 1.39
NPRL3-201ENST00000399953 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
NPRL3-201ENST00000399953 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
NPRL3-201ENST00000399953 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
NPRL3-201ENST00000399953 ITGAEP38570 1179 aa23.59■■□□□ 1.37
NPRL3-201ENST00000399953 ERICH6BQ5W0A0 696 aa23.59■■□□□ 1.37
NPRL3-201ENST00000399953 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
NPRL3-201ENST00000399953 SALL2Q9Y467 1007 aaPredicted RBP23.48■■□□□ 1.35
NPRL3-201ENST00000399953 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
NPRL3-201ENST00000399953 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
NPRL3-201ENST00000399953 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
NPRL3-201ENST00000399953 UBE2Q2Q8WVN8 375 aa23.41■■□□□ 1.34
NPRL3-201ENST00000399953 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
NPRL3-201ENST00000399953 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NPRL3-201ENST00000399953 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
NPRL3-201ENST00000399953 EEA1Q15075 1411 aa23.29■■□□□ 1.32
NPRL3-201ENST00000399953 CCDC136Q96JN2 1154 aa23.29■■□□□ 1.32
NPRL3-201ENST00000399953 GOLGA3Q08378 1498 aa23.27■■□□□ 1.31
NPRL3-201ENST00000399953 SOGA1O94964 1423 aa23.24■■□□□ 1.31
NPRL3-201ENST00000399953 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
NPRL3-201ENST00000399953 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
NPRL3-201ENST00000399953 NBR1Q14596 966 aa23.2■■□□□ 1.3
NPRL3-201ENST00000399953 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.3
NPRL3-201ENST00000399953 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
NPRL3-201ENST00000399953 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
NPRL3-201ENST00000399953 WIZO95785 1651 aa23.16■■□□□ 1.3
NPRL3-201ENST00000399953 VPS8Q8N3P4 1428 aa23.15■■□□□ 1.3
NPRL3-201ENST00000399953 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
NPRL3-201ENST00000399953 IL27Q8NEV9 243 aa23.12■■□□□ 1.29
NPRL3-201ENST00000399953 NACADO15069 1562 aa23.12■■□□□ 1.29
NPRL3-201ENST00000399953 CLIP1P30622 1438 aa23.11■■□□□ 1.29
NPRL3-201ENST00000399953 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.09■■□□□ 1.29
NPRL3-201ENST00000399953 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
NPRL3-201ENST00000399953 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.29
NPRL3-201ENST00000399953 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
NPRL3-201ENST00000399953 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
NPRL3-201ENST00000399953 PAK3O75914 559 aaPredicted RBP23.04■■□□□ 1.28
NPRL3-201ENST00000399953 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
NPRL3-201ENST00000399953 RTN4Q9NQC3 1192 aaKnown RBP23.03■■□□□ 1.28
NPRL3-201ENST00000399953 ANP32CO43423 234 aa23.01■■□□□ 1.27
NPRL3-201ENST00000399953 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
NPRL3-201ENST00000399953 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
NPRL3-201ENST00000399953 CUX2O14529 1486 aa22.96■■□□□ 1.27
NPRL3-201ENST00000399953 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
NPRL3-201ENST00000399953 KIF21BO75037 1637 aa22.93■■□□□ 1.26
NPRL3-201ENST00000399953 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms