RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 KNSTRNQ9Y448 316 aa30.8■■■□□ 2.52
RABGGTA-202ENST00000399409 EFCAB6Q5THR3 1501 aa30.79■■■□□ 2.52
RABGGTA-202ENST00000399409 RCAN3Q9UKA8 241 aa30.79■■■□□ 2.52
RABGGTA-202ENST00000399409 LMTK2Q8IWU2 1503 aa30.78■■■□□ 2.52
RABGGTA-202ENST00000399409 KIDINS220Q9ULH0 1771 aa30.78■■■□□ 2.52
RABGGTA-202ENST00000399409 ZNF518AQ6AHZ1 1483 aa30.77■■■□□ 2.52
RABGGTA-202ENST00000399409 MAP3K4Q9Y6R4 1608 aa30.76■■■□□ 2.52
RABGGTA-202ENST00000399409 KIF1BO60333 1816 aa30.76■■■□□ 2.51
RABGGTA-202ENST00000399409 NPC1L1Q9UHC9 1359 aa30.74■■■□□ 2.51
RABGGTA-202ENST00000399409 CFAP74Q9C0B2 1584 aa30.73■■■□□ 2.51
RABGGTA-202ENST00000399409 ASXL1Q8IXJ9 1541 aa30.72■■■□□ 2.51
RABGGTA-202ENST00000399409 MSH5O43196 834 aa30.72■■■□□ 2.51
RABGGTA-202ENST00000399409 AMER1Q5JTC6 1135 aaPredicted RBP30.71■■■□□ 2.51
RABGGTA-202ENST00000399409 KDM5AP29375 1690 aaKnown RBP30.7■■■□□ 2.51
RABGGTA-202ENST00000399409 IFT172Q9UG01 1749 aa30.7■■■□□ 2.5
RABGGTA-202ENST00000399409 NPM1P06748 294 aaKnown RBP eCLIP30.7■■■□□ 2.5
RABGGTA-202ENST00000399409 SALL2Q9Y467 1007 aaPredicted RBP30.7■■■□□ 2.5
RABGGTA-202ENST00000399409 MYOM1P52179 1685 aa30.69■■■□□ 2.5
RABGGTA-202ENST00000399409 PPRC1Q5VV67 1664 aaKnown RBP30.69■■■□□ 2.5
RABGGTA-202ENST00000399409 ABCA6Q8N139 1617 aa30.69■■■□□ 2.5
RABGGTA-202ENST00000399409 PPP2R1AP30153 589 aa30.69■■■□□ 2.5
RABGGTA-202ENST00000399409 NRXN1Q9ULB1 1477 aa30.67■■■□□ 2.5
RABGGTA-202ENST00000399409 UGGT1Q9NYU2 1555 aa30.66■■■□□ 2.5
RABGGTA-202ENST00000399409 PIK3C2GO75747 1445 aa30.66■■■□□ 2.5
RABGGTA-202ENST00000399409 POGZQ7Z3K3 1410 aa30.62■■■□□ 2.49
RABGGTA-202ENST00000399409 CFAP70Q5T0N1 1121 aa30.62■■■□□ 2.49
RABGGTA-202ENST00000399409 CDCA7LQ96GN5 454 aa30.62■■■□□ 2.49
RABGGTA-202ENST00000399409 MLH3Q9UHC1 1453 aa30.62■■■□□ 2.49
RABGGTA-202ENST00000399409 ADGRF5Q8IZF2 1346 aa30.62■■■□□ 2.49
RABGGTA-202ENST00000399409 WDR43Q15061 677 aaKnown RBP eCLIP30.61■■■□□ 2.49
RABGGTA-202ENST00000399409 ADAMTS8Q9UP79 889 aa30.61■■■□□ 2.49
RABGGTA-202ENST00000399409 MROH2AA6NES4 1674 aa30.61■■■□□ 2.49
RABGGTA-202ENST00000399409 ADGRB3O60242 1522 aa30.61■■■□□ 2.49
RABGGTA-202ENST00000399409 CD109Q6YHK3 1445 aa30.6■■■□□ 2.49
RABGGTA-202ENST00000399409 MYO3AQ8NEV4 1616 aa30.6■■■□□ 2.49
RABGGTA-202ENST00000399409 ERVK-7P63135 1459 aa30.59■■■□□ 2.49
RABGGTA-202ENST00000399409 EXOC6Q8TAG9 804 aa30.58■■■□□ 2.49
RABGGTA-202ENST00000399409 SBNO2Q9Y2G9 1366 aa30.58■■■□□ 2.49
RABGGTA-202ENST00000399409 SETBP1Q9Y6X0 1596 aa30.57■■■□□ 2.48
RABGGTA-202ENST00000399409 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
RABGGTA-202ENST00000399409 ERICH6Q7L0X2 663 aa30.56■■■□□ 2.48
RABGGTA-202ENST00000399409 HECW2Q9P2P5 1572 aa30.56■■■□□ 2.48
RABGGTA-202ENST00000399409 FRMPD1Q5SYB0 1578 aa30.53■■■□□ 2.48
RABGGTA-202ENST00000399409 NOS1P29475 1434 aa30.51■■■□□ 2.47
RABGGTA-202ENST00000399409 NPATQ14207 1427 aa30.5■■■□□ 2.47
RABGGTA-202ENST00000399409 RPGRIP1LQ68CZ1 1315 aa30.49■■■□□ 2.47
RABGGTA-202ENST00000399409 PPLO60437 1756 aa30.47■■■□□ 2.47
RABGGTA-202ENST00000399409 ZNF521Q96K83 1311 aa30.46■■■□□ 2.47
RABGGTA-202ENST00000399409 PLEKHH1Q9ULM0 1364 aa30.45■■■□□ 2.47
RABGGTA-202ENST00000399409 NEO1Q92859 1461 aa30.45■■■□□ 2.47
RABGGTA-202ENST00000399409 CENPJQ9HC77 1338 aaPredicted RBP30.45■■■□□ 2.46
RABGGTA-202ENST00000399409 ABCC3O15438 1527 aa30.44■■■□□ 2.46
RABGGTA-202ENST00000399409 TCERG1O14776 1098 aaKnown RBP30.44■■■□□ 2.46
RABGGTA-202ENST00000399409 C14orf93Q9H972 538 aaKnown RBP30.43■■■□□ 2.46
RABGGTA-202ENST00000399409 CHGAP10645 457 aaKnown RBP30.42■■■□□ 2.46
RABGGTA-202ENST00000399409 GOLGA2Q08379 1002 aa30.42■■■□□ 2.46
RABGGTA-202ENST00000399409 GGT6Q6P531 493 aa30.41■■■□□ 2.46
RABGGTA-202ENST00000399409 DUSP27Q5VZP5 1158 aa30.4■■■□□ 2.46
RABGGTA-202ENST00000399409 CARD14Q9BXL6 1004 aa30.39■■■□□ 2.46
RABGGTA-202ENST00000399409 NGEFQ8N5V2 710 aa30.39■■■□□ 2.46
RABGGTA-202ENST00000399409 ZC3H13Q5T200 1668 aaKnown RBP30.39■■■□□ 2.45
RABGGTA-202ENST00000399409 ADGRB1O14514 1584 aa30.38■■■□□ 2.45
RABGGTA-202ENST00000399409 CAMSAP1Q5T5Y3 1602 aa30.38■■■□□ 2.45
RABGGTA-202ENST00000399409 PLIN1O60240 522 aa30.36■■■□□ 2.45
RABGGTA-202ENST00000399409 ANP32AP39687 249 aaKnown RBP30.36■■■□□ 2.45
RABGGTA-202ENST00000399409 MS4A1P11836 297 aa30.35■■■□□ 2.45
RABGGTA-202ENST00000399409 CRBNQ96SW2 442 aa30.35■■■□□ 2.45
RABGGTA-202ENST00000399409 QRICH2Q9H0J4 1663 aa30.34■■■□□ 2.45
RABGGTA-202ENST00000399409 SLFN5Q08AF3 891 aa30.33■■■□□ 2.45
RABGGTA-202ENST00000399409 PIK3C2BO00750 1634 aa30.32■■■□□ 2.44
RABGGTA-202ENST00000399409 POLR3AO14802 1390 aaPredicted RBP30.32■■■□□ 2.44
RABGGTA-202ENST00000399409 TRMT2AQ8IZ69 625 aaKnown RBP30.31■■■□□ 2.44
RABGGTA-202ENST00000399409 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.31■■■□□ 2.44
RABGGTA-202ENST00000399409 NOP58Q9Y2X3 529 aaKnown RBP30.31■■■□□ 2.44
RABGGTA-202ENST00000399409 TRAK1Q9UPV9 953 aa30.3■■■□□ 2.44
RABGGTA-202ENST00000399409 CFAP65Q6ZU64 1925 aaKnown RBP30.3■■■□□ 2.44
RABGGTA-202ENST00000399409 DIP2CQ9Y2E4 1556 aa30.3■■■□□ 2.44
RABGGTA-202ENST00000399409 ARHGAP31Q2M1Z3 1444 aa30.29■■■□□ 2.44
RABGGTA-202ENST00000399409 PUS7Q96PZ0 661 aaKnown RBP30.29■■■□□ 2.44
RABGGTA-202ENST00000399409 IPO9Q96P70 1041 aaKnown RBP30.27■■■□□ 2.44
RABGGTA-202ENST00000399409 USP32Q8NFA0 1604 aa30.27■■■□□ 2.44
RABGGTA-202ENST00000399409 SIGLEC1Q9BZZ2 1709 aa30.26■■■□□ 2.43
RABGGTA-202ENST00000399409 VGFO15240 615 aaPredicted RBP30.26■■■□□ 2.43
RABGGTA-202ENST00000399409 CCDC146Q8IYE0 955 aa30.26■■■□□ 2.43
RABGGTA-202ENST00000399409 NSD3Q9BZ95 1437 aa30.26■■■□□ 2.43
RABGGTA-202ENST00000399409 APAF1O14727 1248 aa30.25■■■□□ 2.43
RABGGTA-202ENST00000399409 RAPGEF3O95398 923 aa30.23■■■□□ 2.43
RABGGTA-202ENST00000399409 NEXMIFQ5QGS0 1516 aa30.23■■■□□ 2.43
RABGGTA-202ENST00000399409 GLI2P10070 1586 aa30.22■■■□□ 2.43
RABGGTA-202ENST00000399409 NKTRP30414 1462 aaKnown RBP30.22■■■□□ 2.43
RABGGTA-202ENST00000399409 E9PSI1 815 aa30.22■■■□□ 2.43
RABGGTA-202ENST00000399409 MORC1Q86VD1 984 aa30.21■■■□□ 2.43
RABGGTA-202ENST00000399409 RICTORQ6R327 1708 aa30.21■■■□□ 2.43
RABGGTA-202ENST00000399409 C20orf194Q5TEA3 1177 aa30.21■■■□□ 2.43
RABGGTA-202ENST00000399409 PDE4AP27815 886 aa30.2■■■□□ 2.43
RABGGTA-202ENST00000399409 TMEM132EQ6IEE7 984 aa30.2■■■□□ 2.43
RABGGTA-202ENST00000399409 ZFYVE9O95405 1425 aa30.19■■■□□ 2.42
RABGGTA-202ENST00000399409 BACH2Q9BYV9 841 aa30.18■■■□□ 2.42
RABGGTA-202ENST00000399409 SLC12A5Q9H2X9 1139 aa30.18■■■□□ 2.42
RABGGTA-202ENST00000399409 EVC2Q86UK5 1308 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms