RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 CCDC34Q96HJ3 373 aa18.91■□□□□ 0.62
ABCC1-201ENST00000399408 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
ABCC1-201ENST00000399408 TPM4P67936 248 aa18.9■□□□□ 0.62
ABCC1-201ENST00000399408 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
ABCC1-201ENST00000399408 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.62
ABCC1-201ENST00000399408 TOP2BQ02880 1626 aa18.89■□□□□ 0.61
ABCC1-201ENST00000399408 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
ABCC1-201ENST00000399408 GNAI1P63096 354 aa18.88■□□□□ 0.61
ABCC1-201ENST00000399408 NEXNQ0ZGT2 675 aa18.88■□□□□ 0.61
ABCC1-201ENST00000399408 EIF2S2P20042 333 aaKnown RBP18.87■□□□□ 0.61
ABCC1-201ENST00000399408 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
ABCC1-201ENST00000399408 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
ABCC1-201ENST00000399408 NESP48681 1621 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 PHF14O94880 888 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 CABP2Q9NPB3 220 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
ABCC1-201ENST00000399408 CLSTN1O94985 981 aa18.85■□□□□ 0.61
ABCC1-201ENST00000399408 HMGXB3Q12766 1538 aa18.85■□□□□ 0.61
ABCC1-201ENST00000399408 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
ABCC1-201ENST00000399408 C9orf78Q9NZ63 289 aaPredicted RBP18.85■□□□□ 0.61
ABCC1-201ENST00000399408 PSME1Q06323 249 aa18.85■□□□□ 0.61
ABCC1-201ENST00000399408 CFAP70Q5T0N1 1121 aa18.84■□□□□ 0.61
ABCC1-201ENST00000399408 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
ABCC1-201ENST00000399408 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
ABCC1-201ENST00000399408 REC8O95072 547 aa18.84■□□□□ 0.61
ABCC1-201ENST00000399408 DIAPH3Q9NSV4 1193 aa18.84■□□□□ 0.61
ABCC1-201ENST00000399408 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
ABCC1-201ENST00000399408 AAMPQ13685 434 aa18.84■□□□□ 0.61
ABCC1-201ENST00000399408 FRAT2O75474 233 aaPredicted RBP18.84■□□□□ 0.61
ABCC1-201ENST00000399408 ADAMTS8Q9UP79 889 aa18.83■□□□□ 0.61
ABCC1-201ENST00000399408 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.6
ABCC1-201ENST00000399408 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
ABCC1-201ENST00000399408 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
ABCC1-201ENST00000399408 EVA1CP58658 441 aa18.83■□□□□ 0.6
ABCC1-201ENST00000399408 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
ABCC1-201ENST00000399408 CHMP4CQ96CF2 233 aa18.82■□□□□ 0.6
ABCC1-201ENST00000399408 HMOX1P09601 288 aa18.82■□□□□ 0.6
ABCC1-201ENST00000399408 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
ABCC1-201ENST00000399408 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
ABCC1-201ENST00000399408 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
ABCC1-201ENST00000399408 NECTIN2Q92692 538 aa18.81■□□□□ 0.6
ABCC1-201ENST00000399408 PLEKHH2Q8IVE3 1493 aa18.8■□□□□ 0.6
ABCC1-201ENST00000399408 DDX58O95786 925 aaKnown RBP18.8■□□□□ 0.6
ABCC1-201ENST00000399408 SKOR2Q2VWA4 1001 aaPredicted RBP18.8■□□□□ 0.6
ABCC1-201ENST00000399408 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
ABCC1-201ENST00000399408 TIAM1Q13009 1591 aa18.8■□□□□ 0.6
ABCC1-201ENST00000399408 DDX49Q9Y6V7 483 aaKnown RBP18.8■□□□□ 0.6
ABCC1-201ENST00000399408 PPP2R1AP30153 589 aa18.79■□□□□ 0.6
ABCC1-201ENST00000399408 SF3A1Q15459 793 aaKnown RBP18.79■□□□□ 0.6
ABCC1-201ENST00000399408 MTHFSP49914 203 aa18.79■□□□□ 0.6
ABCC1-201ENST00000399408 H3BQV1 296 aa18.79■□□□□ 0.6
ABCC1-201ENST00000399408 IFFO2Q5TF58 517 aa18.79■□□□□ 0.6
ABCC1-201ENST00000399408 RASSF8Q8NHQ8 419 aa18.79■□□□□ 0.6
ABCC1-201ENST00000399408 G3V3G9 751 aa18.78■□□□□ 0.6
ABCC1-201ENST00000399408 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
ABCC1-201ENST00000399408 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
ABCC1-201ENST00000399408 DCAF8Q5TAQ9 597 aa18.78■□□□□ 0.6
ABCC1-201ENST00000399408 IFIT2P09913 472 aaKnown RBP18.78■□□□□ 0.6
ABCC1-201ENST00000399408 HECW1Q76N89 1606 aa18.78■□□□□ 0.6
ABCC1-201ENST00000399408 FAM184AQ8NB25 1140 aa18.77■□□□□ 0.6
ABCC1-201ENST00000399408 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.59
ABCC1-201ENST00000399408 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.59
ABCC1-201ENST00000399408 PANK1Q8TE04 598 aa18.77■□□□□ 0.59
ABCC1-201ENST00000399408 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.59
ABCC1-201ENST00000399408 GSE1Q14687 1217 aa18.75■□□□□ 0.59
ABCC1-201ENST00000399408 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
ABCC1-201ENST00000399408 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
ABCC1-201ENST00000399408 HSP90AB4PQ58FF6 505 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 DAPK1P53355 1430 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
ABCC1-201ENST00000399408 CDCA7LQ96GN5 454 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
ABCC1-201ENST00000399408 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
ABCC1-201ENST00000399408 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
ABCC1-201ENST00000399408 CHMP5Q9NZZ3 219 aa18.72■□□□□ 0.59
ABCC1-201ENST00000399408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
ABCC1-201ENST00000399408 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
ABCC1-201ENST00000399408 NLRP6P59044 892 aa18.71■□□□□ 0.59
ABCC1-201ENST00000399408 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
ABCC1-201ENST00000399408 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
ABCC1-201ENST00000399408 CPLX2Q6PUV4 134 aaKnown RBP18.69■□□□□ 0.58
ABCC1-201ENST00000399408 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
ABCC1-201ENST00000399408 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
ABCC1-201ENST00000399408 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
ABCC1-201ENST00000399408 AKAP17AQ02040 695 aaKnown RBP18.68■□□□□ 0.58
ABCC1-201ENST00000399408 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
ABCC1-201ENST00000399408 ATF3P18847 181 aa18.68■□□□□ 0.58
ABCC1-201ENST00000399408 ERC2O15083 957 aa18.67■□□□□ 0.58
ABCC1-201ENST00000399408 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
ABCC1-201ENST00000399408 NUTM2GQ5VZR2 741 aa18.67■□□□□ 0.58
ABCC1-201ENST00000399408 SUPT6HQ7KZ85 1726 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms