RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
COL25A1-201ENST00000399126 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
COL25A1-201ENST00000399126 MLECQ14165 292 aa21.03■□□□□ 0.96
COL25A1-201ENST00000399126 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
COL25A1-201ENST00000399126 LAMC1P11047 1609 aa21.02■□□□□ 0.96
COL25A1-201ENST00000399126 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.96
COL25A1-201ENST00000399126 ARHGAP31Q2M1Z3 1444 aa21.01■□□□□ 0.95
COL25A1-201ENST00000399126 AGLP35573 1532 aa21■□□□□ 0.95
COL25A1-201ENST00000399126 PIK3C2BO00750 1634 aa21■□□□□ 0.95
COL25A1-201ENST00000399126 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
COL25A1-201ENST00000399126 PREX1Q8TCU6 1659 aa20.99■□□□□ 0.95
COL25A1-201ENST00000399126 CLTCQ00610 1675 aaKnown RBP20.98■□□□□ 0.95
COL25A1-201ENST00000399126 MYOM2P54296 1465 aa20.97■□□□□ 0.95
COL25A1-201ENST00000399126 CFAP70Q5T0N1 1121 aa20.97■□□□□ 0.95
COL25A1-201ENST00000399126 IDI1Q13907 227 aa20.96■□□□□ 0.95
COL25A1-201ENST00000399126 PPLO60437 1756 aa20.96■□□□□ 0.95
COL25A1-201ENST00000399126 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
COL25A1-201ENST00000399126 NUTM2DQ5VT03 806 aaPredicted RBP20.95■□□□□ 0.94
COL25A1-201ENST00000399126 TESK2Q96S53 571 aa20.95■□□□□ 0.94
COL25A1-201ENST00000399126 IQGAP1P46940 1657 aa20.95■□□□□ 0.94
COL25A1-201ENST00000399126 MYO5BQ9ULV0 1848 aa20.94■□□□□ 0.94
COL25A1-201ENST00000399126 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
COL25A1-201ENST00000399126 DISP3Q9P2K9 1392 aa20.93■□□□□ 0.94
COL25A1-201ENST00000399126 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
COL25A1-201ENST00000399126 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
COL25A1-201ENST00000399126 CCER2I3L3R5 266 aa20.92■□□□□ 0.94
COL25A1-201ENST00000399126 KIAA1210Q9ULL0 1709 aa20.92■□□□□ 0.94
COL25A1-201ENST00000399126 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
COL25A1-201ENST00000399126 TULP1O00294 542 aaPredicted RBP20.91■□□□□ 0.94
COL25A1-201ENST00000399126 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
COL25A1-201ENST00000399126 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
COL25A1-201ENST00000399126 SCAF11Q99590 1463 aaKnown RBP20.89■□□□□ 0.93
COL25A1-201ENST00000399126 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
COL25A1-201ENST00000399126 NEXMIFQ5QGS0 1516 aa20.88■□□□□ 0.93
COL25A1-201ENST00000399126 CCDC184Q52MB2 194 aa20.87■□□□□ 0.93
COL25A1-201ENST00000399126 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
COL25A1-201ENST00000399126 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
COL25A1-201ENST00000399126 AMER1Q5JTC6 1135 aaPredicted RBP20.86■□□□□ 0.93
COL25A1-201ENST00000399126 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
COL25A1-201ENST00000399126 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
COL25A1-201ENST00000399126 RPGRIP1LQ68CZ1 1315 aa20.84■□□□□ 0.93
COL25A1-201ENST00000399126 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
COL25A1-201ENST00000399126 TMF1P82094 1093 aa20.81■□□□□ 0.92
COL25A1-201ENST00000399126 C14orf93Q9H972 538 aaKnown RBP20.81■□□□□ 0.92
COL25A1-201ENST00000399126 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
COL25A1-201ENST00000399126 ZMYM3Q14202 1370 aa20.79■□□□□ 0.92
COL25A1-201ENST00000399126 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
COL25A1-201ENST00000399126 ESF1Q9H501 851 aaKnown RBP20.79■□□□□ 0.92
COL25A1-201ENST00000399126 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
COL25A1-201ENST00000399126 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
COL25A1-201ENST00000399126 VGFO15240 615 aaPredicted RBP20.77■□□□□ 0.92
COL25A1-201ENST00000399126 TRAK1Q9UPV9 953 aa20.77■□□□□ 0.92
COL25A1-201ENST00000399126 EIF3AQ14152 1382 aaKnown RBP20.77■□□□□ 0.92
COL25A1-201ENST00000399126 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
COL25A1-201ENST00000399126 ANP32EQ9BTT0 268 aa20.73■□□□□ 0.91
COL25A1-201ENST00000399126 PANK3Q9H999 370 aa20.72■□□□□ 0.91
COL25A1-201ENST00000399126 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
COL25A1-201ENST00000399126 MRS2Q9HD23 443 aa20.72■□□□□ 0.91
COL25A1-201ENST00000399126 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
COL25A1-201ENST00000399126 ZFYVE9O95405 1425 aa20.71■□□□□ 0.91
COL25A1-201ENST00000399126 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
COL25A1-201ENST00000399126 ASXL1Q8IXJ9 1541 aa20.7■□□□□ 0.9
COL25A1-201ENST00000399126 KCNA4P22459 653 aa20.7■□□□□ 0.9
COL25A1-201ENST00000399126 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
COL25A1-201ENST00000399126 CENPJQ9HC77 1338 aaPredicted RBP20.69■□□□□ 0.9
COL25A1-201ENST00000399126 MYOM1P52179 1685 aa20.68■□□□□ 0.9
COL25A1-201ENST00000399126 QRICH2Q9H0J4 1663 aa20.68■□□□□ 0.9
COL25A1-201ENST00000399126 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
COL25A1-201ENST00000399126 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
COL25A1-201ENST00000399126 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
COL25A1-201ENST00000399126 TNRQ92752 1358 aa20.66■□□□□ 0.9
COL25A1-201ENST00000399126 STK26Q9P289 416 aa20.66■□□□□ 0.9
COL25A1-201ENST00000399126 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
COL25A1-201ENST00000399126 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
COL25A1-201ENST00000399126 SAFB2Q14151 953 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL25A1-201ENST00000399126 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
COL25A1-201ENST00000399126 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
COL25A1-201ENST00000399126 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
COL25A1-201ENST00000399126 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
COL25A1-201ENST00000399126 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL25A1-201ENST00000399126 C3P01024 1663 aa20.61■□□□□ 0.89
COL25A1-201ENST00000399126 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
COL25A1-201ENST00000399126 PODXL2Q9NZ53 605 aa20.6■□□□□ 0.89
COL25A1-201ENST00000399126 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
COL25A1-201ENST00000399126 UBR1Q8IWV7 1749 aa20.59■□□□□ 0.89
COL25A1-201ENST00000399126 PTPRMP28827 1452 aa20.59■□□□□ 0.89
COL25A1-201ENST00000399126 RALBP1Q15311 655 aa20.58■□□□□ 0.89
COL25A1-201ENST00000399126 HOMEZQ8IX15 550 aa20.58■□□□□ 0.88
COL25A1-201ENST00000399126 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.88
COL25A1-201ENST00000399126 YTHDC2Q9H6S0 1430 aaKnown RBP20.57■□□□□ 0.88
COL25A1-201ENST00000399126 SETD1AO15047 1707 aaKnown RBP20.57■□□□□ 0.88
COL25A1-201ENST00000399126 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
COL25A1-201ENST00000399126 TULP4Q9NRJ4 1543 aa20.55■□□□□ 0.88
COL25A1-201ENST00000399126 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
COL25A1-201ENST00000399126 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
COL25A1-201ENST00000399126 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
COL25A1-201ENST00000399126 SENP3-EIF4A1A0A087X0R7 540 aa20.52■□□□□ 0.88
COL25A1-201ENST00000399126 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
COL25A1-201ENST00000399126 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
COL25A1-201ENST00000399126 SLC12A5Q9H2X9 1139 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms