RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
MBD1-209ENST00000398495 PPLO60437 1756 aa20.9■□□□□ 0.94
MBD1-209ENST00000398495 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
MBD1-209ENST00000398495 SYNMO15061 1565 aa20.9■□□□□ 0.94
MBD1-209ENST00000398495 TMF1P82094 1093 aa20.89■□□□□ 0.94
MBD1-209ENST00000398495 PIK3C2BO00750 1634 aa20.88■□□□□ 0.93
MBD1-209ENST00000398495 NOS1P29475 1434 aa20.88■□□□□ 0.93
MBD1-209ENST00000398495 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
MBD1-209ENST00000398495 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
MBD1-209ENST00000398495 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
MBD1-209ENST00000398495 ARHGAP31Q2M1Z3 1444 aa20.84■□□□□ 0.93
MBD1-209ENST00000398495 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.92
MBD1-209ENST00000398495 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.92
MBD1-209ENST00000398495 EIF3AQ14152 1382 aaKnown RBP20.82■□□□□ 0.92
MBD1-209ENST00000398495 RALBP1Q15311 655 aa20.82■□□□□ 0.92
MBD1-209ENST00000398495 KIF13AQ9H1H9 1805 aa20.82■□□□□ 0.92
MBD1-209ENST00000398495 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
MBD1-209ENST00000398495 MYOM1P52179 1685 aa20.82■□□□□ 0.92
MBD1-209ENST00000398495 PANK3Q9H999 370 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 MYO3AQ8NEV4 1616 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 FKBP8Q14318 412 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
MBD1-209ENST00000398495 PIK3C2GO75747 1445 aa20.8■□□□□ 0.92
MBD1-209ENST00000398495 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
MBD1-209ENST00000398495 KDM5AP29375 1690 aaKnown RBP20.78■□□□□ 0.92
MBD1-209ENST00000398495 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
MBD1-209ENST00000398495 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
MBD1-209ENST00000398495 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
MBD1-209ENST00000398495 RPGRIP1LQ68CZ1 1315 aa20.75■□□□□ 0.91
MBD1-209ENST00000398495 ADGRB1O14514 1584 aa20.75■□□□□ 0.91
MBD1-209ENST00000398495 NEFLP07196 543 aa20.75■□□□□ 0.91
MBD1-209ENST00000398495 ERVK-7P63135 1459 aa20.75■□□□□ 0.91
MBD1-209ENST00000398495 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
MBD1-209ENST00000398495 LRPPRCP42704 1394 aaKnown RBP20.73■□□□□ 0.91
MBD1-209ENST00000398495 AGLP35573 1532 aa20.73■□□□□ 0.91
MBD1-209ENST00000398495 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
MBD1-209ENST00000398495 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
MBD1-209ENST00000398495 BCANQ96GW7 911 aa20.72■□□□□ 0.91
MBD1-209ENST00000398495 NLRP13Q86W25 1043 aa20.7■□□□□ 0.91
MBD1-209ENST00000398495 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.91
MBD1-209ENST00000398495 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.91
MBD1-209ENST00000398495 TMEM131LA2VDJ0 1609 aa20.7■□□□□ 0.9
MBD1-209ENST00000398495 ARHGEF40Q8TER5 1519 aa20.7■□□□□ 0.9
MBD1-209ENST00000398495 CLTCQ00610 1675 aaKnown RBP20.7■□□□□ 0.9
MBD1-209ENST00000398495 IDI1Q13907 227 aa20.7■□□□□ 0.9
MBD1-209ENST00000398495 NUTM2DQ5VT03 806 aaPredicted RBP20.68■□□□□ 0.9
MBD1-209ENST00000398495 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
MBD1-209ENST00000398495 CENPJQ9HC77 1338 aaPredicted RBP20.66■□□□□ 0.9
MBD1-209ENST00000398495 TMEM132EQ6IEE7 984 aa20.65■□□□□ 0.9
MBD1-209ENST00000398495 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
MBD1-209ENST00000398495 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
MBD1-209ENST00000398495 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
MBD1-209ENST00000398495 FBXO31Q5XUX0 539 aaPredicted RBP20.65■□□□□ 0.9
MBD1-209ENST00000398495 TRAK1Q9UPV9 953 aa20.65■□□□□ 0.9
MBD1-209ENST00000398495 ARHGEF28Q8N1W1 1705 aaKnown RBP20.64■□□□□ 0.89
MBD1-209ENST00000398495 KNSTRNQ9Y448 316 aa20.63■□□□□ 0.89
MBD1-209ENST00000398495 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
MBD1-209ENST00000398495 AMER1Q5JTC6 1135 aaPredicted RBP20.62■□□□□ 0.89
MBD1-209ENST00000398495 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
MBD1-209ENST00000398495 SMG6Q86US8 1419 aaKnown RBP20.62■□□□□ 0.89
MBD1-209ENST00000398495 SLC24A1O60721 1099 aa20.61■□□□□ 0.89
MBD1-209ENST00000398495 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
MBD1-209ENST00000398495 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
MBD1-209ENST00000398495 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.88
MBD1-209ENST00000398495 MLECQ14165 292 aa20.57■□□□□ 0.88
MBD1-209ENST00000398495 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
MBD1-209ENST00000398495 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
MBD1-209ENST00000398495 BLMP54132 1417 aaPredicted RBP20.55■□□□□ 0.88
MBD1-209ENST00000398495 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
MBD1-209ENST00000398495 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
MBD1-209ENST00000398495 TULP4Q9NRJ4 1543 aa20.55■□□□□ 0.88
MBD1-209ENST00000398495 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
MBD1-209ENST00000398495 INSRP06213 1382 aa20.52■□□□□ 0.88
MBD1-209ENST00000398495 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
MBD1-209ENST00000398495 A2ML1A8K2U0 1454 aa20.51■□□□□ 0.87
MBD1-209ENST00000398495 ALKQ9UM73 1620 aa20.5■□□□□ 0.87
MBD1-209ENST00000398495 PTPRMP28827 1452 aa20.48■□□□□ 0.87
MBD1-209ENST00000398495 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
MBD1-209ENST00000398495 NSD3Q9BZ95 1437 aa20.47■□□□□ 0.87
MBD1-209ENST00000398495 STK26Q9P289 416 aa20.46■□□□□ 0.87
MBD1-209ENST00000398495 YTHDC2Q9H6S0 1430 aaKnown RBP20.46■□□□□ 0.87
MBD1-209ENST00000398495 USP32Q8NFA0 1604 aa20.45■□□□□ 0.86
MBD1-209ENST00000398495 SALL2Q9Y467 1007 aaPredicted RBP20.45■□□□□ 0.86
MBD1-209ENST00000398495 RIMS2Q9UQ26 1411 aa20.45■□□□□ 0.86
MBD1-209ENST00000398495 EVC2Q86UK5 1308 aa20.45■□□□□ 0.86
MBD1-209ENST00000398495 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
MBD1-209ENST00000398495 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
MBD1-209ENST00000398495 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD1-209ENST00000398495 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
MBD1-209ENST00000398495 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
MBD1-209ENST00000398495 ERICH6BQ5W0A0 696 aa20.42■□□□□ 0.86
MBD1-209ENST00000398495 RNF123Q5XPI4 1314 aa20.41■□□□□ 0.86
MBD1-209ENST00000398495 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
MBD1-209ENST00000398495 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
MBD1-209ENST00000398495 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
MBD1-209ENST00000398495 CABP2Q9NPB3 220 aa20.4■□□□□ 0.86
MBD1-209ENST00000398495 NRXN3Q9Y4C0 1643 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms