RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
PPME1-202ENST00000398427 ZFYVE9O95405 1425 aa16.46■□□□□ 0.22
PPME1-202ENST00000398427 SLIT1O75093 1534 aa16.45■□□□□ 0.22
PPME1-202ENST00000398427 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
PPME1-202ENST00000398427 ARHGAP23Q9P227 1491 aa16.45■□□□□ 0.22
PPME1-202ENST00000398427 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
PPME1-202ENST00000398427 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
PPME1-202ENST00000398427 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
PPME1-202ENST00000398427 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
PPME1-202ENST00000398427 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
PPME1-202ENST00000398427 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
PPME1-202ENST00000398427 MYOM2P54296 1465 aa16.42■□□□□ 0.22
PPME1-202ENST00000398427 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
PPME1-202ENST00000398427 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
PPME1-202ENST00000398427 HSPA2P54652 639 aa16.39■□□□□ 0.21
PPME1-202ENST00000398427 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
PPME1-202ENST00000398427 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
PPME1-202ENST00000398427 LTKP29376 864 aa16.39■□□□□ 0.21
PPME1-202ENST00000398427 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
PPME1-202ENST00000398427 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
PPME1-202ENST00000398427 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
PPME1-202ENST00000398427 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
PPME1-202ENST00000398427 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
PPME1-202ENST00000398427 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
PPME1-202ENST00000398427 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPME1-202ENST00000398427 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
PPME1-202ENST00000398427 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
PPME1-202ENST00000398427 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
PPME1-202ENST00000398427 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
PPME1-202ENST00000398427 NRXN3Q9Y4C0 1643 aa16.35■□□□□ 0.21
PPME1-202ENST00000398427 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
PPME1-202ENST00000398427 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
PPME1-202ENST00000398427 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
PPME1-202ENST00000398427 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
PPME1-202ENST00000398427 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
PPME1-202ENST00000398427 STRCQ7RTU9 1775 aa16.33■□□□□ 0.21
PPME1-202ENST00000398427 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.21
PPME1-202ENST00000398427 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
PPME1-202ENST00000398427 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
PPME1-202ENST00000398427 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
PPME1-202ENST00000398427 MED14O60244 1454 aa16.32■□□□□ 0.2
PPME1-202ENST00000398427 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
PPME1-202ENST00000398427 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
PPME1-202ENST00000398427 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
PPME1-202ENST00000398427 LAMC1P11047 1609 aa16.31■□□□□ 0.2
PPME1-202ENST00000398427 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
PPME1-202ENST00000398427 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
PPME1-202ENST00000398427 NPHP4O75161 1426 aaPredicted RBP16.29■□□□□ 0.2
PPME1-202ENST00000398427 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
PPME1-202ENST00000398427 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
PPME1-202ENST00000398427 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
PPME1-202ENST00000398427 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
PPME1-202ENST00000398427 ASXL1Q8IXJ9 1541 aa16.27■□□□□ 0.2
PPME1-202ENST00000398427 BCANQ96GW7 911 aa16.27■□□□□ 0.19
PPME1-202ENST00000398427 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
PPME1-202ENST00000398427 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
PPME1-202ENST00000398427 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
PPME1-202ENST00000398427 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
PPME1-202ENST00000398427 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
PPME1-202ENST00000398427 METP08581 1390 aa16.23■□□□□ 0.19
PPME1-202ENST00000398427 GPRASP1Q5JY77 1395 aa16.23■□□□□ 0.19
PPME1-202ENST00000398427 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
PPME1-202ENST00000398427 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
PPME1-202ENST00000398427 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
PPME1-202ENST00000398427 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
PPME1-202ENST00000398427 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
PPME1-202ENST00000398427 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
PPME1-202ENST00000398427 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
PPME1-202ENST00000398427 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
PPME1-202ENST00000398427 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
PPME1-202ENST00000398427 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
PPME1-202ENST00000398427 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
PPME1-202ENST00000398427 STK26Q9P289 416 aa16.15■□□□□ 0.18
PPME1-202ENST00000398427 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
PPME1-202ENST00000398427 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.18
PPME1-202ENST00000398427 STRCP1A6NGW2 1772 aa16.14■□□□□ 0.18
PPME1-202ENST00000398427 CPS1P31327 1500 aa16.14■□□□□ 0.17
PPME1-202ENST00000398427 TECPR2O15040 1411 aa16.14■□□□□ 0.17
PPME1-202ENST00000398427 ABCC11Q96J66 1382 aa16.14■□□□□ 0.17
PPME1-202ENST00000398427 USP47Q96K76 1375 aa16.14■□□□□ 0.17
PPME1-202ENST00000398427 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
PPME1-202ENST00000398427 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
PPME1-202ENST00000398427 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
PPME1-202ENST00000398427 KCNA6P17658 529 aa16.11■□□□□ 0.17
PPME1-202ENST00000398427 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
PPME1-202ENST00000398427 PTCH1Q13635 1447 aa16.1■□□□□ 0.17
PPME1-202ENST00000398427 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
PPME1-202ENST00000398427 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
PPME1-202ENST00000398427 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.17
PPME1-202ENST00000398427 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.17
PPME1-202ENST00000398427 QRICH2Q9H0J4 1663 aa16.08■□□□□ 0.16
PPME1-202ENST00000398427 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.16
PPME1-202ENST00000398427 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.16
PPME1-202ENST00000398427 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
PPME1-202ENST00000398427 PRAM1Q96QH2 718 aa16.07■□□□□ 0.16
PPME1-202ENST00000398427 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
PPME1-202ENST00000398427 WAPLQ7Z5K2 1190 aa16.07■□□□□ 0.16
PPME1-202ENST00000398427 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
PPME1-202ENST00000398427 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
PPME1-202ENST00000398427 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms