RNA–Protein interactions for RNA: ENST00000398409.1

CST3-202, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CST3, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-202ENST00000398409 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
CST3-202ENST00000398409 KCNA6P17658 529 aa26.87■■□□□ 1.89
CST3-202ENST00000398409 ZFYVE9O95405 1425 aa26.87■■□□□ 1.89
CST3-202ENST00000398409 LRRC7Q96NW7 1537 aa26.84■■□□□ 1.89
CST3-202ENST00000398409 SLC26A8Q96RN1 970 aa26.83■■□□□ 1.89
CST3-202ENST00000398409 SLC4A1APQ9BWU0 796 aaKnown RBP26.83■■□□□ 1.89
CST3-202ENST00000398409 TBX22Q9Y458 520 aa26.82■■□□□ 1.88
CST3-202ENST00000398409 SPHKAPQ2M3C7 1700 aa26.81■■□□□ 1.88
CST3-202ENST00000398409 SCAF1Q9H7N4 1312 aaKnown RBP26.78■■□□□ 1.88
CST3-202ENST00000398409 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
CST3-202ENST00000398409 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
CST3-202ENST00000398409 PIK3R4Q99570 1358 aa26.76■■□□□ 1.87
CST3-202ENST00000398409 STRCP1A6NGW2 1772 aa26.76■■□□□ 1.87
CST3-202ENST00000398409 TRPM2O94759 1503 aa26.75■■□□□ 1.87
CST3-202ENST00000398409 PIP4K2BP78356 416 aa26.75■■□□□ 1.87
CST3-202ENST00000398409 PROSER2Q86WR7 435 aaPredicted RBP26.75■■□□□ 1.87
CST3-202ENST00000398409 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
CST3-202ENST00000398409 DIP2AQ14689 1571 aa26.73■■□□□ 1.87
CST3-202ENST00000398409 RPGRIP1LQ68CZ1 1315 aa26.69■■□□□ 1.86
CST3-202ENST00000398409 NCOA3Q9Y6Q9 1424 aa26.69■■□□□ 1.86
CST3-202ENST00000398409 TMEM94Q12767 1356 aa26.69■■□□□ 1.86
CST3-202ENST00000398409 NWD1Q149M9 1564 aa26.68■■□□□ 1.86
CST3-202ENST00000398409 VGFO15240 615 aaPredicted RBP26.67■■□□□ 1.86
CST3-202ENST00000398409 KIF1BO60333 1816 aa26.67■■□□□ 1.86
CST3-202ENST00000398409 SETD5Q9C0A6 1442 aa26.66■■□□□ 1.86
CST3-202ENST00000398409 NUTM2DQ5VT03 806 aaPredicted RBP26.66■■□□□ 1.86
CST3-202ENST00000398409 MPHOSPH9Q99550 1183 aa26.66■■□□□ 1.86
CST3-202ENST00000398409 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
CST3-202ENST00000398409 CHD2O14647 1828 aaKnown RBP26.63■■□□□ 1.85
CST3-202ENST00000398409 MSH6P52701 1360 aa26.63■■□□□ 1.85
CST3-202ENST00000398409 CLTCL1P53675 1640 aa26.63■■□□□ 1.85
CST3-202ENST00000398409 HSPA1LP34931 641 aa26.61■■□□□ 1.85
CST3-202ENST00000398409 SETBP1Q9Y6X0 1596 aa26.59■■□□□ 1.85
CST3-202ENST00000398409 CCDC144AA2RUR9 1427 aa26.59■■□□□ 1.85
CST3-202ENST00000398409 SENP3Q9H4L4 574 aaPredicted RBP26.59■■□□□ 1.85
CST3-202ENST00000398409 FAM135BQ49AJ0 1406 aa26.58■■□□□ 1.85
CST3-202ENST00000398409 HRCP23327 699 aa26.58■■□□□ 1.85
CST3-202ENST00000398409 AMOTL2Q9Y2J4 779 aa26.57■■□□□ 1.84
CST3-202ENST00000398409 XIRP1Q702N8 1843 aaKnown RBP26.57■■□□□ 1.84
CST3-202ENST00000398409 C14orf37Q86TY3 774 aa26.56■■□□□ 1.84
CST3-202ENST00000398409 ALKQ9UM73 1620 aa26.56■■□□□ 1.84
CST3-202ENST00000398409 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
CST3-202ENST00000398409 NEXMIFQ5QGS0 1516 aa26.55■■□□□ 1.84
CST3-202ENST00000398409 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
CST3-202ENST00000398409 CADPS2Q86UW7 1296 aa26.53■■□□□ 1.84
CST3-202ENST00000398409 SLAIN2Q9P270 581 aa26.51■■□□□ 1.83
CST3-202ENST00000398409 RAB3GAP2Q9H2M9 1393 aa26.5■■□□□ 1.83
CST3-202ENST00000398409 ATF3P18847 181 aa26.5■■□□□ 1.83
CST3-202ENST00000398409 FOXD1Q16676 465 aa26.5■■□□□ 1.83
CST3-202ENST00000398409 RBM33Q96EV2 1170 aaKnown RBP26.49■■□□□ 1.83
CST3-202ENST00000398409 ANKRD30BQ9BXX2 1392 aa26.48■■□□□ 1.83
CST3-202ENST00000398409 NRXN3Q9Y4C0 1643 aa26.47■■□□□ 1.83
CST3-202ENST00000398409 METP08581 1390 aa26.45■■□□□ 1.82
CST3-202ENST00000398409 PTPRUQ92729 1446 aa26.44■■□□□ 1.82
CST3-202ENST00000398409 DCCP43146 1447 aa26.43■■□□□ 1.82
CST3-202ENST00000398409 RGL3Q3MIN7 710 aa26.42■■□□□ 1.82
CST3-202ENST00000398409 SPATA31E1Q6ZUB1 1445 aa26.4■■□□□ 1.82
CST3-202ENST00000398409 XRN1Q8IZH2 1706 aaKnown RBP26.39■■□□□ 1.82
CST3-202ENST00000398409 PPLO60437 1756 aa26.39■■□□□ 1.82
CST3-202ENST00000398409 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
CST3-202ENST00000398409 PTCH1Q13635 1447 aa26.35■■□□□ 1.81
CST3-202ENST00000398409 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
CST3-202ENST00000398409 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
CST3-202ENST00000398409 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
CST3-202ENST00000398409 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
CST3-202ENST00000398409 ADGRF5Q8IZF2 1346 aa26.31■■□□□ 1.8
CST3-202ENST00000398409 ADGRL3Q9HAR2 1447 aa26.31■■□□□ 1.8
CST3-202ENST00000398409 MED1Q15648 1581 aaPredicted RBP26.29■■□□□ 1.8
CST3-202ENST00000398409 SETD1AO15047 1707 aaKnown RBP26.26■■□□□ 1.79
CST3-202ENST00000398409 PIK3C2GO75747 1445 aa26.25■■□□□ 1.79
CST3-202ENST00000398409 JCADQ9P266 1359 aa26.25■■□□□ 1.79
CST3-202ENST00000398409 IFT172Q9UG01 1749 aa26.25■■□□□ 1.79
CST3-202ENST00000398409 MYOM2P54296 1465 aa26.23■■□□□ 1.79
CST3-202ENST00000398409 BRINP3Q76B58 766 aa26.23■■□□□ 1.79
CST3-202ENST00000398409 LRPPRCP42704 1394 aaKnown RBP26.22■■□□□ 1.79
CST3-202ENST00000398409 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
CST3-202ENST00000398409 ROBO2Q9HCK4 1378 aa26.22■■□□□ 1.79
CST3-202ENST00000398409 SIRT1Q96EB6 747 aa26.22■■□□□ 1.79
CST3-202ENST00000398409 C14orf93Q9H972 538 aaKnown RBP26.22■■□□□ 1.79
CST3-202ENST00000398409 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
CST3-202ENST00000398409 MST1RQ04912 1400 aa26.21■■□□□ 1.79
CST3-202ENST00000398409 TECPR2O15040 1411 aa26.2■■□□□ 1.78
CST3-202ENST00000398409 DHX57Q6P158 1386 aaKnown RBP26.2■■□□□ 1.78
CST3-202ENST00000398409 AHDC1Q5TGY3 1603 aaPredicted RBP26.19■■□□□ 1.78
CST3-202ENST00000398409 NRXN1Q9ULB1 1477 aa26.18■■□□□ 1.78
CST3-202ENST00000398409 ILDR2Q71H61 639 aa26.18■■□□□ 1.78
CST3-202ENST00000398409 SPATA31A6Q5VVP1 1343 aa26.17■■□□□ 1.78
CST3-202ENST00000398409 LAMC1P11047 1609 aa26.17■■□□□ 1.78
CST3-202ENST00000398409 STK26Q9P289 416 aa26.16■■□□□ 1.78
CST3-202ENST00000398409 SOCS7O14512 581 aa26.15■■□□□ 1.78
CST3-202ENST00000398409 LRRC59Q96AG4 307 aaKnown RBP26.15■■□□□ 1.78
CST3-202ENST00000398409 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.77
CST3-202ENST00000398409 ASXL1Q8IXJ9 1541 aa26.14■■□□□ 1.77
CST3-202ENST00000398409 YTHDC2Q9H6S0 1430 aaKnown RBP26.14■■□□□ 1.77
CST3-202ENST00000398409 TMEM132EQ6IEE7 984 aa26.13■■□□□ 1.77
CST3-202ENST00000398409 DCAF11Q8TEB1 546 aa26.13■■□□□ 1.77
CST3-202ENST00000398409 C1orf167Q5SNV9 1468 aa26.12■■□□□ 1.77
CST3-202ENST00000398409 COL16A1Q07092 1604 aaPredicted RBP26.12■■□□□ 1.77
CST3-202ENST00000398409 CFAP70Q5T0N1 1121 aa26.11■■□□□ 1.77
CST3-202ENST00000398409 KNDC1Q76NI1 1749 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms