RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ZFYVE9O95405 1425 aa28.15■■■□□ 2.1
MAP1LC3A-203ENST00000397709 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.1
MAP1LC3A-203ENST00000397709 TIMELESSQ9UNS1 1208 aa28.14■■■□□ 2.1
MAP1LC3A-203ENST00000397709 RIMS2Q9UQ26 1411 aa28.13■■■□□ 2.09
MAP1LC3A-203ENST00000397709 MYOM2P54296 1465 aa28.09■■■□□ 2.09
MAP1LC3A-203ENST00000397709 DCAF11Q8TEB1 546 aa28.06■■■□□ 2.08
MAP1LC3A-203ENST00000397709 STAC3Q96MF2 364 aa28.05■■■□□ 2.08
MAP1LC3A-203ENST00000397709 NRXN1Q9ULB1 1477 aa28.04■■■□□ 2.08
MAP1LC3A-203ENST00000397709 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.04■■■□□ 2.08
MAP1LC3A-203ENST00000397709 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
MAP1LC3A-203ENST00000397709 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
MAP1LC3A-203ENST00000397709 LTKP29376 864 aa28.02■■■□□ 2.08
MAP1LC3A-203ENST00000397709 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
MAP1LC3A-203ENST00000397709 HSPA2P54652 639 aa28.01■■■□□ 2.07
MAP1LC3A-203ENST00000397709 NUTM2DQ5VT03 806 aaPredicted RBP28.01■■■□□ 2.07
MAP1LC3A-203ENST00000397709 KDM2AQ9Y2K7 1162 aa28.01■■■□□ 2.07
MAP1LC3A-203ENST00000397709 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
MAP1LC3A-203ENST00000397709 TXNDC2Q86VQ3 553 aa28■■■□□ 2.07
MAP1LC3A-203ENST00000397709 EID1Q9Y6B2 187 aa28■■■□□ 2.07
MAP1LC3A-203ENST00000397709 ADGRF5Q8IZF2 1346 aa27.99■■■□□ 2.07
MAP1LC3A-203ENST00000397709 ANKLE2Q86XL3 938 aa27.98■■■□□ 2.07
MAP1LC3A-203ENST00000397709 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
MAP1LC3A-203ENST00000397709 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
MAP1LC3A-203ENST00000397709 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
MAP1LC3A-203ENST00000397709 PIK3C2GO75747 1445 aa27.97■■■□□ 2.07
MAP1LC3A-203ENST00000397709 PLEKHG1Q9ULL1 1385 aa27.96■■■□□ 2.07
MAP1LC3A-203ENST00000397709 SETBP1Q9Y6X0 1596 aa27.94■■■□□ 2.06
MAP1LC3A-203ENST00000397709 NRXN3Q9Y4C0 1643 aa27.94■■■□□ 2.06
MAP1LC3A-203ENST00000397709 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
MAP1LC3A-203ENST00000397709 MED14O60244 1454 aa27.94■■■□□ 2.06
MAP1LC3A-203ENST00000397709 STRCQ7RTU9 1775 aa27.92■■■□□ 2.06
MAP1LC3A-203ENST00000397709 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
MAP1LC3A-203ENST00000397709 IQGAP1P46940 1657 aa27.91■■■□□ 2.06
MAP1LC3A-203ENST00000397709 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
MAP1LC3A-203ENST00000397709 NPHP4O75161 1426 aaPredicted RBP27.89■■■□□ 2.06
MAP1LC3A-203ENST00000397709 KIAA1210Q9ULL0 1709 aa27.89■■■□□ 2.05
MAP1LC3A-203ENST00000397709 LAMC1P11047 1609 aa27.88■■■□□ 2.05
MAP1LC3A-203ENST00000397709 TRPM1Q7Z4N2 1603 aa27.88■■■□□ 2.05
MAP1LC3A-203ENST00000397709 ADAMTS13Q76LX8 1427 aa27.87■■■□□ 2.05
MAP1LC3A-203ENST00000397709 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
MAP1LC3A-203ENST00000397709 ALKQ9UM73 1620 aa27.86■■■□□ 2.05
MAP1LC3A-203ENST00000397709 C14orf93Q9H972 538 aaKnown RBP27.85■■■□□ 2.05
MAP1LC3A-203ENST00000397709 DIP2AQ14689 1571 aa27.85■■■□□ 2.05
MAP1LC3A-203ENST00000397709 RALGAPBQ86X10 1494 aa27.83■■■□□ 2.05
MAP1LC3A-203ENST00000397709 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
MAP1LC3A-203ENST00000397709 CFAP70Q5T0N1 1121 aa27.82■■■□□ 2.04
MAP1LC3A-203ENST00000397709 BCANQ96GW7 911 aa27.81■■■□□ 2.04
MAP1LC3A-203ENST00000397709 ASXL1Q8IXJ9 1541 aa27.8■■■□□ 2.04
MAP1LC3A-203ENST00000397709 ADGRB1O14514 1584 aa27.78■■■□□ 2.04
MAP1LC3A-203ENST00000397709 TBX22Q9Y458 520 aa27.78■■■□□ 2.04
MAP1LC3A-203ENST00000397709 SLC26A8Q96RN1 970 aa27.76■■■□□ 2.03
MAP1LC3A-203ENST00000397709 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
MAP1LC3A-203ENST00000397709 NBPF1Q3BBV0 1214 aa27.75■■■□□ 2.03
MAP1LC3A-203ENST00000397709 ROCK2O75116 1388 aaKnown RBP27.74■■■□□ 2.03
MAP1LC3A-203ENST00000397709 METP08581 1390 aa27.73■■■□□ 2.03
MAP1LC3A-203ENST00000397709 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
MAP1LC3A-203ENST00000397709 TMEM132EQ6IEE7 984 aa27.7■■■□□ 2.02
MAP1LC3A-203ENST00000397709 DMRT2Q9Y5R5 561 aa27.69■■■□□ 2.02
MAP1LC3A-203ENST00000397709 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
MAP1LC3A-203ENST00000397709 CHD2O14647 1828 aaKnown RBP27.67■■■□□ 2.02
MAP1LC3A-203ENST00000397709 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
MAP1LC3A-203ENST00000397709 LRPPRCP42704 1394 aaKnown RBP27.66■■■□□ 2.02
MAP1LC3A-203ENST00000397709 KNDC1Q76NI1 1749 aa27.65■■■□□ 2.02
MAP1LC3A-203ENST00000397709 XRN1Q8IZH2 1706 aaKnown RBP27.65■■■□□ 2.02
MAP1LC3A-203ENST00000397709 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
MAP1LC3A-203ENST00000397709 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
MAP1LC3A-203ENST00000397709 TECPR2O15040 1411 aa27.62■■■□□ 2.01
MAP1LC3A-203ENST00000397709 ABCC11Q96J66 1382 aa27.61■■■□□ 2.01
MAP1LC3A-203ENST00000397709 DLC1Q96QB1 1528 aa27.61■■■□□ 2.01
MAP1LC3A-203ENST00000397709 CPS1P31327 1500 aa27.6■■■□□ 2.01
MAP1LC3A-203ENST00000397709 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
MAP1LC3A-203ENST00000397709 KCNA6P17658 529 aa27.58■■■□□ 2.01
MAP1LC3A-203ENST00000397709 AMOTL2Q9Y2J4 779 aa27.58■■■□□ 2.01
MAP1LC3A-203ENST00000397709 STK26Q9P289 416 aa27.57■■■□□ 2
MAP1LC3A-203ENST00000397709 STRCP1A6NGW2 1772 aa27.57■■■□□ 2
MAP1LC3A-203ENST00000397709 PTCH1Q13635 1447 aa27.57■■■□□ 2
MAP1LC3A-203ENST00000397709 TRAK1Q9UPV9 953 aa27.56■■■□□ 2
MAP1LC3A-203ENST00000397709 USP47Q96K76 1375 aa27.56■■■□□ 2
MAP1LC3A-203ENST00000397709 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
MAP1LC3A-203ENST00000397709 EIF3AQ14152 1382 aaKnown RBP27.53■■■□□ 2
MAP1LC3A-203ENST00000397709 ROBO2Q9HCK4 1378 aa27.53■■■□□ 2
MAP1LC3A-203ENST00000397709 SIRT1Q96EB6 747 aa27.53■■■□□ 2
MAP1LC3A-203ENST00000397709 FAM135BQ49AJ0 1406 aa27.52■■■□□ 2
MAP1LC3A-203ENST00000397709 ZNF335Q9H4Z2 1342 aaPredicted RBP27.5■■□□□ 1.99
MAP1LC3A-203ENST00000397709 EIF4G2P78344 907 aaKnown RBP eCLIP27.48■■□□□ 1.99
MAP1LC3A-203ENST00000397709 PLEKHH1Q9ULM0 1364 aa27.47■■□□□ 1.99
MAP1LC3A-203ENST00000397709 PRAM1Q96QH2 718 aa27.46■■□□□ 1.99
MAP1LC3A-203ENST00000397709 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.99
MAP1LC3A-203ENST00000397709 HSPA5P11021 654 aaKnown RBP27.45■■□□□ 1.98
MAP1LC3A-203ENST00000397709 QRICH2Q9H0J4 1663 aa27.45■■□□□ 1.98
MAP1LC3A-203ENST00000397709 WAPLQ7Z5K2 1190 aa27.44■■□□□ 1.98
MAP1LC3A-203ENST00000397709 ST20-MTHFSA0A0A6YYL1 179 aa27.43■■□□□ 1.98
MAP1LC3A-203ENST00000397709 POGKQ9P215 609 aa27.43■■□□□ 1.98
MAP1LC3A-203ENST00000397709 LTBP4Q8N2S1 1624 aa27.42■■□□□ 1.98
MAP1LC3A-203ENST00000397709 SBNO2Q9Y2G9 1366 aa27.4■■□□□ 1.98
MAP1LC3A-203ENST00000397709 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.4■■□□□ 1.98
MAP1LC3A-203ENST00000397709 LRRC7Q96NW7 1537 aa27.4■■□□□ 1.98
MAP1LC3A-203ENST00000397709 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
MAP1LC3A-203ENST00000397709 TESK2Q96S53 571 aa27.38■■□□□ 1.97
MAP1LC3A-203ENST00000397709 SAFB2Q14151 953 aaKnown RBP eCLIP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms