RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CLSTN1O94985 981 aa18.32■□□□□ 0.52
CHL1-202ENST00000397491 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
CHL1-202ENST00000397491 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
CHL1-202ENST00000397491 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
CHL1-202ENST00000397491 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
CHL1-202ENST00000397491 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
CHL1-202ENST00000397491 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
CHL1-202ENST00000397491 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
CHL1-202ENST00000397491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.3■□□□□ 0.52
CHL1-202ENST00000397491 PATL2C9JE40 543 aaKnown RBP18.3■□□□□ 0.52
CHL1-202ENST00000397491 PES1O00541 588 aaKnown RBP18.3■□□□□ 0.52
CHL1-202ENST00000397491 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
CHL1-202ENST00000397491 CCDC70Q6NSX1 233 aa18.29■□□□□ 0.52
CHL1-202ENST00000397491 SASS6Q6UVJ0 657 aa18.29■□□□□ 0.52
CHL1-202ENST00000397491 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
CHL1-202ENST00000397491 CWC15Q9P013 229 aaKnown RBP18.29■□□□□ 0.52
CHL1-202ENST00000397491 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
CHL1-202ENST00000397491 VPS37CA5D8V6 355 aaPredicted RBP18.28■□□□□ 0.52
CHL1-202ENST00000397491 TPD52L1Q16890 204 aaPredicted RBP18.28■□□□□ 0.52
CHL1-202ENST00000397491 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
CHL1-202ENST00000397491 TSR1Q2NL82 804 aaKnown RBP18.28■□□□□ 0.52
CHL1-202ENST00000397491 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CHL1-202ENST00000397491 ANO2Q9NQ90 1003 aa18.28■□□□□ 0.52
CHL1-202ENST00000397491 TPM1P09493 284 aa18.27■□□□□ 0.52
CHL1-202ENST00000397491 PDE4CQ08493 712 aa18.27■□□□□ 0.52
CHL1-202ENST00000397491 HSP90B2PQ58FF3 399 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 MBD3O95983 291 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 ZMYND15Q9H091 742 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 SMC3Q9UQE7 1217 aa18.26■□□□□ 0.51
CHL1-202ENST00000397491 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 MCM4P33991 863 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 AAMPQ13685 434 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
CHL1-202ENST00000397491 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
CHL1-202ENST00000397491 CALRP27797 417 aaKnown RBP18.23■□□□□ 0.51
CHL1-202ENST00000397491 MPNDQ8N594 471 aa18.23■□□□□ 0.51
CHL1-202ENST00000397491 WIZO95785 1651 aa18.23■□□□□ 0.51
CHL1-202ENST00000397491 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
CHL1-202ENST00000397491 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
CHL1-202ENST00000397491 ACBD3Q9H3P7 528 aa18.22■□□□□ 0.51
CHL1-202ENST00000397491 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
CHL1-202ENST00000397491 CDC45O75419 566 aa18.22■□□□□ 0.51
CHL1-202ENST00000397491 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
CHL1-202ENST00000397491 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
CHL1-202ENST00000397491 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
CHL1-202ENST00000397491 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
CHL1-202ENST00000397491 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
CHL1-202ENST00000397491 PRDM10Q9NQV6 1147 aa18.21■□□□□ 0.51
CHL1-202ENST00000397491 NPHP1O15259 732 aa18.21■□□□□ 0.51
CHL1-202ENST00000397491 ZSCAN30Q86W11 494 aa18.21■□□□□ 0.51
CHL1-202ENST00000397491 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
CHL1-202ENST00000397491 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
CHL1-202ENST00000397491 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
CHL1-202ENST00000397491 PDCL3Q9H2J4 239 aa18.19■□□□□ 0.5
CHL1-202ENST00000397491 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
CHL1-202ENST00000397491 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
CHL1-202ENST00000397491 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
CHL1-202ENST00000397491 H0YHG0 523 aa18.18■□□□□ 0.5
CHL1-202ENST00000397491 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
CHL1-202ENST00000397491 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
CHL1-202ENST00000397491 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
CHL1-202ENST00000397491 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
CHL1-202ENST00000397491 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
CHL1-202ENST00000397491 AK7Q96M32 723 aa18.17■□□□□ 0.5
CHL1-202ENST00000397491 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
CHL1-202ENST00000397491 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
CHL1-202ENST00000397491 HNRNPMP52272 730 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHL1-202ENST00000397491 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
CHL1-202ENST00000397491 KIF3BO15066 747 aa18.16■□□□□ 0.5
CHL1-202ENST00000397491 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
CHL1-202ENST00000397491 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 LEKR1Q6ZMV7 388 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 CCDC112Q8NEF3 446 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHL1-202ENST00000397491 CCDC184Q52MB2 194 aa18.15■□□□□ 0.5
CHL1-202ENST00000397491 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
CHL1-202ENST00000397491 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
CHL1-202ENST00000397491 RABEP1Q15276 862 aa18.13■□□□□ 0.49
CHL1-202ENST00000397491 PDCL2Q8N4E4 241 aa18.13■□□□□ 0.49
CHL1-202ENST00000397491 RDXP35241 583 aaKnown RBP18.13■□□□□ 0.49
CHL1-202ENST00000397491 RIPK4P57078 832 aa18.13■□□□□ 0.49
CHL1-202ENST00000397491 CBX1P83916 185 aa18.13■□□□□ 0.49
CHL1-202ENST00000397491 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
CHL1-202ENST00000397491 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
CHL1-202ENST00000397491 NEK4P51957 841 aa18.12■□□□□ 0.49
CHL1-202ENST00000397491 CEP89Q96ST8 783 aa18.12■□□□□ 0.49
CHL1-202ENST00000397491 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
CHL1-202ENST00000397491 NAT10Q9H0A0 1025 aaKnown RBP18.11■□□□□ 0.49
CHL1-202ENST00000397491 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
CHL1-202ENST00000397491 K7ELQ4 463 aaPredicted RBP18.11■□□□□ 0.49
CHL1-202ENST00000397491 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
CHL1-202ENST00000397491 ANKRD20A12PQ8NF67 263 aa18.1■□□□□ 0.49
CHL1-202ENST00000397491 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
CHL1-202ENST00000397491 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms