RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 IQGAP1P46940 1657 aa12.69□□□□□ -0.38
NUP98-206ENST00000397013 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
NUP98-206ENST00000397013 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
NUP98-206ENST00000397013 VPS8Q8N3P4 1428 aa12.67□□□□□ -0.38
NUP98-206ENST00000397013 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
NUP98-206ENST00000397013 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
NUP98-206ENST00000397013 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
NUP98-206ENST00000397013 ABCC5O15440 1437 aa12.66□□□□□ -0.38
NUP98-206ENST00000397013 EID1Q9Y6B2 187 aa12.66□□□□□ -0.38
NUP98-206ENST00000397013 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
NUP98-206ENST00000397013 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
NUP98-206ENST00000397013 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
NUP98-206ENST00000397013 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
NUP98-206ENST00000397013 KCNA6P17658 529 aa12.64□□□□□ -0.39
NUP98-206ENST00000397013 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
NUP98-206ENST00000397013 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
NUP98-206ENST00000397013 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
NUP98-206ENST00000397013 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
NUP98-206ENST00000397013 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
NUP98-206ENST00000397013 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
NUP98-206ENST00000397013 SLIT1O75093 1534 aa12.62□□□□□ -0.39
NUP98-206ENST00000397013 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
NUP98-206ENST00000397013 CEP152O94986 1710 aa12.62□□□□□ -0.39
NUP98-206ENST00000397013 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
NUP98-206ENST00000397013 BCANQ96GW7 911 aa12.6□□□□□ -0.39
NUP98-206ENST00000397013 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
NUP98-206ENST00000397013 SYNMO15061 1565 aa12.58□□□□□ -0.4
NUP98-206ENST00000397013 DAPK1P53355 1430 aa12.58□□□□□ -0.4
NUP98-206ENST00000397013 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
NUP98-206ENST00000397013 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
NUP98-206ENST00000397013 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
NUP98-206ENST00000397013 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
NUP98-206ENST00000397013 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
NUP98-206ENST00000397013 TET3O43151 1660 aa12.56□□□□□ -0.4
NUP98-206ENST00000397013 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
NUP98-206ENST00000397013 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
NUP98-206ENST00000397013 KANK1Q14678 1352 aa12.56□□□□□ -0.4
NUP98-206ENST00000397013 NOS1P29475 1434 aa12.54□□□□□ -0.4
NUP98-206ENST00000397013 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
NUP98-206ENST00000397013 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
NUP98-206ENST00000397013 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
NUP98-206ENST00000397013 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
NUP98-206ENST00000397013 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
NUP98-206ENST00000397013 FGD6Q6ZV73 1430 aa12.53□□□□□ -0.4
NUP98-206ENST00000397013 CHGAP10645 457 aaKnown RBP12.52□□□□□ -0.41
NUP98-206ENST00000397013 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.41
NUP98-206ENST00000397013 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
NUP98-206ENST00000397013 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
NUP98-206ENST00000397013 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
NUP98-206ENST00000397013 MSH6P52701 1360 aa12.5□□□□□ -0.41
NUP98-206ENST00000397013 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
NUP98-206ENST00000397013 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
NUP98-206ENST00000397013 RIMS2Q9UQ26 1411 aa12.48□□□□□ -0.41
NUP98-206ENST00000397013 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
NUP98-206ENST00000397013 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
NUP98-206ENST00000397013 JCADQ9P266 1359 aa12.47□□□□□ -0.41
NUP98-206ENST00000397013 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
NUP98-206ENST00000397013 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
NUP98-206ENST00000397013 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
NUP98-206ENST00000397013 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
NUP98-206ENST00000397013 LRP6O75581 1613 aa12.46□□□□□ -0.41
NUP98-206ENST00000397013 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
NUP98-206ENST00000397013 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
NUP98-206ENST00000397013 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
NUP98-206ENST00000397013 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
NUP98-206ENST00000397013 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUP98-206ENST00000397013 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
NUP98-206ENST00000397013 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
NUP98-206ENST00000397013 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
NUP98-206ENST00000397013 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
NUP98-206ENST00000397013 AMOTL2Q9Y2J4 779 aa12.44□□□□□ -0.42
NUP98-206ENST00000397013 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
NUP98-206ENST00000397013 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
NUP98-206ENST00000397013 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
NUP98-206ENST00000397013 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
NUP98-206ENST00000397013 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
NUP98-206ENST00000397013 ADGRL2O95490 1459 aa12.42□□□□□ -0.42
NUP98-206ENST00000397013 ATF3P18847 181 aa12.42□□□□□ -0.42
NUP98-206ENST00000397013 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
NUP98-206ENST00000397013 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
NUP98-206ENST00000397013 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
NUP98-206ENST00000397013 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
NUP98-206ENST00000397013 PHLPP1O60346 1717 aa12.41□□□□□ -0.42
NUP98-206ENST00000397013 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
NUP98-206ENST00000397013 ITGAEP38570 1179 aa12.41□□□□□ -0.42
NUP98-206ENST00000397013 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
NUP98-206ENST00000397013 MIER1Q8N108 512 aa12.41□□□□□ -0.42
NUP98-206ENST00000397013 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
NUP98-206ENST00000397013 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
NUP98-206ENST00000397013 TMEM131LA2VDJ0 1609 aa12.4□□□□□ -0.42
NUP98-206ENST00000397013 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
NUP98-206ENST00000397013 ZNF772Q68DY9 489 aaPredicted RBP12.39□□□□□ -0.43
NUP98-206ENST00000397013 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
NUP98-206ENST00000397013 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
NUP98-206ENST00000397013 RXRBP28702 533 aa12.38□□□□□ -0.43
NUP98-206ENST00000397013 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
NUP98-206ENST00000397013 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
NUP98-206ENST00000397013 RPRD2Q5VT52 1461 aaKnown RBP12.38□□□□□ -0.43
NUP98-206ENST00000397013 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
NUP98-206ENST00000397013 NUP155O75694 1391 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms