RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
GAPDH-204ENST00000396859 RIMS2Q9UQ26 1411 aa19.95■□□□□ 0.78
GAPDH-204ENST00000396859 DHX57Q6P158 1386 aaKnown RBP19.94■□□□□ 0.78
GAPDH-204ENST00000396859 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
GAPDH-204ENST00000396859 LTKP29376 864 aa19.92■□□□□ 0.78
GAPDH-204ENST00000396859 BCANQ96GW7 911 aa19.92■□□□□ 0.78
GAPDH-204ENST00000396859 MED14O60244 1454 aa19.92■□□□□ 0.78
GAPDH-204ENST00000396859 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
GAPDH-204ENST00000396859 ZFYVE9O95405 1425 aa19.91■□□□□ 0.78
GAPDH-204ENST00000396859 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
GAPDH-204ENST00000396859 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
GAPDH-204ENST00000396859 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
GAPDH-204ENST00000396859 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
GAPDH-204ENST00000396859 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
GAPDH-204ENST00000396859 NUTM2DQ5VT03 806 aaPredicted RBP19.87■□□□□ 0.77
GAPDH-204ENST00000396859 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
GAPDH-204ENST00000396859 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
GAPDH-204ENST00000396859 PPLO60437 1756 aa19.83■□□□□ 0.77
GAPDH-204ENST00000396859 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
GAPDH-204ENST00000396859 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
GAPDH-204ENST00000396859 SLC26A8Q96RN1 970 aa19.79■□□□□ 0.76
GAPDH-204ENST00000396859 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
GAPDH-204ENST00000396859 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
GAPDH-204ENST00000396859 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
GAPDH-204ENST00000396859 STAC3Q96MF2 364 aa19.77■□□□□ 0.76
GAPDH-204ENST00000396859 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.76
GAPDH-204ENST00000396859 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
GAPDH-204ENST00000396859 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
GAPDH-204ENST00000396859 TBX22Q9Y458 520 aa19.76■□□□□ 0.75
GAPDH-204ENST00000396859 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
GAPDH-204ENST00000396859 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
GAPDH-204ENST00000396859 MYOM2P54296 1465 aa19.74■□□□□ 0.75
GAPDH-204ENST00000396859 KDM2AQ9Y2K7 1162 aa19.74■□□□□ 0.75
GAPDH-204ENST00000396859 ADGRF5Q8IZF2 1346 aa19.74■□□□□ 0.75
GAPDH-204ENST00000396859 ADAMTS13Q76LX8 1427 aa19.73■□□□□ 0.75
GAPDH-204ENST00000396859 NRXN3Q9Y4C0 1643 aa19.71■□□□□ 0.75
GAPDH-204ENST00000396859 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
GAPDH-204ENST00000396859 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
GAPDH-204ENST00000396859 KCNA6P17658 529 aa19.69■□□□□ 0.74
GAPDH-204ENST00000396859 CPS1P31327 1500 aa19.69■□□□□ 0.74
GAPDH-204ENST00000396859 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
GAPDH-204ENST00000396859 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
GAPDH-204ENST00000396859 NRXN1Q9ULB1 1477 aa19.67■□□□□ 0.74
GAPDH-204ENST00000396859 LAMC1P11047 1609 aa19.67■□□□□ 0.74
GAPDH-204ENST00000396859 LTBP4Q8N2S1 1624 aa19.67■□□□□ 0.74
GAPDH-204ENST00000396859 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
GAPDH-204ENST00000396859 CHD2O14647 1828 aaKnown RBP19.65■□□□□ 0.74
GAPDH-204ENST00000396859 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
GAPDH-204ENST00000396859 METP08581 1390 aa19.64■□□□□ 0.73
GAPDH-204ENST00000396859 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
GAPDH-204ENST00000396859 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
GAPDH-204ENST00000396859 C14orf93Q9H972 538 aaKnown RBP19.63■□□□□ 0.73
GAPDH-204ENST00000396859 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
GAPDH-204ENST00000396859 STRCP1A6NGW2 1772 aa19.62■□□□□ 0.73
GAPDH-204ENST00000396859 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
GAPDH-204ENST00000396859 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
GAPDH-204ENST00000396859 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
GAPDH-204ENST00000396859 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
GAPDH-204ENST00000396859 PTPRUQ92729 1446 aa19.59■□□□□ 0.73
GAPDH-204ENST00000396859 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
GAPDH-204ENST00000396859 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
GAPDH-204ENST00000396859 XRN1Q8IZH2 1706 aaKnown RBP19.58■□□□□ 0.72
GAPDH-204ENST00000396859 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.72
GAPDH-204ENST00000396859 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
GAPDH-204ENST00000396859 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
GAPDH-204ENST00000396859 STK26Q9P289 416 aa19.56■□□□□ 0.72
GAPDH-204ENST00000396859 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
GAPDH-204ENST00000396859 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
GAPDH-204ENST00000396859 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
GAPDH-204ENST00000396859 YTHDC2Q9H6S0 1430 aaKnown RBP19.54■□□□□ 0.72
GAPDH-204ENST00000396859 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
GAPDH-204ENST00000396859 PTCH1Q13635 1447 aa19.52■□□□□ 0.72
GAPDH-204ENST00000396859 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
GAPDH-204ENST00000396859 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
GAPDH-204ENST00000396859 KNDC1Q76NI1 1749 aa19.51■□□□□ 0.71
GAPDH-204ENST00000396859 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
GAPDH-204ENST00000396859 ADGRB1O14514 1584 aa19.5■□□□□ 0.71
GAPDH-204ENST00000396859 MSH6P52701 1360 aa19.5■□□□□ 0.71
GAPDH-204ENST00000396859 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
GAPDH-204ENST00000396859 TECPR2O15040 1411 aa19.5■□□□□ 0.71
GAPDH-204ENST00000396859 TRPM1Q7Z4N2 1603 aa19.49■□□□□ 0.71
GAPDH-204ENST00000396859 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
GAPDH-204ENST00000396859 ROCK2O75116 1388 aaKnown RBP19.48■□□□□ 0.71
GAPDH-204ENST00000396859 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
GAPDH-204ENST00000396859 NBPF1Q3BBV0 1214 aa19.47■□□□□ 0.71
GAPDH-204ENST00000396859 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
GAPDH-204ENST00000396859 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
GAPDH-204ENST00000396859 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
GAPDH-204ENST00000396859 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
GAPDH-204ENST00000396859 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
GAPDH-204ENST00000396859 TOM1O60784 492 aa19.46■□□□□ 0.71
GAPDH-204ENST00000396859 POGKQ9P215 609 aa19.46■□□□□ 0.71
GAPDH-204ENST00000396859 DLC1Q96QB1 1528 aa19.46■□□□□ 0.71
GAPDH-204ENST00000396859 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
GAPDH-204ENST00000396859 ATF3P18847 181 aa19.44■□□□□ 0.7
GAPDH-204ENST00000396859 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
GAPDH-204ENST00000396859 RALGAPBQ86X10 1494 aa19.43■□□□□ 0.7
GAPDH-204ENST00000396859 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
GAPDH-204ENST00000396859 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
GAPDH-204ENST00000396859 CADPS2Q86UW7 1296 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms