RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 RIMS2Q9UQ26 1411 aa25.35■■□□□ 1.65
AP1S3-203ENST00000396654 ILDR1Q86SU0 546 aaPredicted RBP25.32■■□□□ 1.64
AP1S3-203ENST00000396654 BCANQ96GW7 911 aa25.32■■□□□ 1.64
AP1S3-203ENST00000396654 STRCP1A6NGW2 1772 aa25.31■■□□□ 1.64
AP1S3-203ENST00000396654 ZFYVE9O95405 1425 aa25.31■■□□□ 1.64
AP1S3-203ENST00000396654 PPP1R15AO75807 674 aaPredicted RBP25.31■■□□□ 1.64
AP1S3-203ENST00000396654 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
AP1S3-203ENST00000396654 SLC26A8Q96RN1 970 aa25.27■■□□□ 1.64
AP1S3-203ENST00000396654 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
AP1S3-203ENST00000396654 FBXO41Q8TF61 875 aa25.24■■□□□ 1.63
AP1S3-203ENST00000396654 CPS1P31327 1500 aa25.22■■□□□ 1.63
AP1S3-203ENST00000396654 ACIN1Q9UKV3 1341 aaKnown RBP25.22■■□□□ 1.63
AP1S3-203ENST00000396654 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.22■■□□□ 1.63
AP1S3-203ENST00000396654 PLEKHG1Q9ULL1 1385 aa25.21■■□□□ 1.63
AP1S3-203ENST00000396654 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
AP1S3-203ENST00000396654 CCDC144AA2RUR9 1427 aa25.19■■□□□ 1.62
AP1S3-203ENST00000396654 PPLO60437 1756 aa25.16■■□□□ 1.62
AP1S3-203ENST00000396654 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
AP1S3-203ENST00000396654 NRXN3Q9Y4C0 1643 aa25.13■■□□□ 1.61
AP1S3-203ENST00000396654 ADAMTS13Q76LX8 1427 aa25.12■■□□□ 1.61
AP1S3-203ENST00000396654 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
AP1S3-203ENST00000396654 CHD2O14647 1828 aaKnown RBP25.12■■□□□ 1.61
AP1S3-203ENST00000396654 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
AP1S3-203ENST00000396654 HRCP23327 699 aa25.12■■□□□ 1.61
AP1S3-203ENST00000396654 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
AP1S3-203ENST00000396654 DIP2AQ14689 1571 aa25.09■■□□□ 1.61
AP1S3-203ENST00000396654 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
AP1S3-203ENST00000396654 UBAP1LF5GYI3 381 aa25.08■■□□□ 1.61
AP1S3-203ENST00000396654 KCNA6P17658 529 aa25.08■■□□□ 1.61
AP1S3-203ENST00000396654 SETBP1Q9Y6X0 1596 aa25.08■■□□□ 1.61
AP1S3-203ENST00000396654 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
AP1S3-203ENST00000396654 RBM33Q96EV2 1170 aaKnown RBP25.07■■□□□ 1.6
AP1S3-203ENST00000396654 TBX22Q9Y458 520 aa25.07■■□□□ 1.6
AP1S3-203ENST00000396654 SPATA31E1Q6ZUB1 1445 aa25.06■■□□□ 1.6
AP1S3-203ENST00000396654 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
AP1S3-203ENST00000396654 ANKRD30BQ9BXX2 1392 aa25.04■■□□□ 1.6
AP1S3-203ENST00000396654 PROSER2Q86WR7 435 aaPredicted RBP25.03■■□□□ 1.6
AP1S3-203ENST00000396654 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
AP1S3-203ENST00000396654 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
AP1S3-203ENST00000396654 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
AP1S3-203ENST00000396654 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
AP1S3-203ENST00000396654 TMEM94Q12767 1356 aa25■■□□□ 1.59
AP1S3-203ENST00000396654 PTPRUQ92729 1446 aa25■■□□□ 1.59
AP1S3-203ENST00000396654 SETD1AO15047 1707 aaKnown RBP25■■□□□ 1.59
AP1S3-203ENST00000396654 METP08581 1390 aa24.98■■□□□ 1.59
AP1S3-203ENST00000396654 ADGRF5Q8IZF2 1346 aa24.98■■□□□ 1.59
AP1S3-203ENST00000396654 PIP4K2BP78356 416 aa24.98■■□□□ 1.59
AP1S3-203ENST00000396654 ALKQ9UM73 1620 aa24.97■■□□□ 1.59
AP1S3-203ENST00000396654 XRN1Q8IZH2 1706 aaKnown RBP24.96■■□□□ 1.59
AP1S3-203ENST00000396654 AMOTL2Q9Y2J4 779 aa24.96■■□□□ 1.59
AP1S3-203ENST00000396654 PIK3R4Q99570 1358 aa24.95■■□□□ 1.59
AP1S3-203ENST00000396654 TOM1O60784 492 aa24.95■■□□□ 1.58
AP1S3-203ENST00000396654 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
AP1S3-203ENST00000396654 KDM2AQ9Y2K7 1162 aa24.87■■□□□ 1.57
AP1S3-203ENST00000396654 MYOM2P54296 1465 aa24.86■■□□□ 1.57
AP1S3-203ENST00000396654 MSH6P52701 1360 aa24.86■■□□□ 1.57
AP1S3-203ENST00000396654 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
AP1S3-203ENST00000396654 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.85■■□□□ 1.57
AP1S3-203ENST00000396654 ASXL1Q8IXJ9 1541 aa24.83■■□□□ 1.57
AP1S3-203ENST00000396654 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
AP1S3-203ENST00000396654 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
AP1S3-203ENST00000396654 TMEM132EQ6IEE7 984 aa24.81■■□□□ 1.56
AP1S3-203ENST00000396654 STK26Q9P289 416 aa24.81■■□□□ 1.56
AP1S3-203ENST00000396654 NALCNQ8IZF0 1738 aa24.81■■□□□ 1.56
AP1S3-203ENST00000396654 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
AP1S3-203ENST00000396654 LAMC1P11047 1609 aa24.79■■□□□ 1.56
AP1S3-203ENST00000396654 CFAP70Q5T0N1 1121 aa24.79■■□□□ 1.56
AP1S3-203ENST00000396654 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
AP1S3-203ENST00000396654 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
AP1S3-203ENST00000396654 HSPA1LP34931 641 aa24.77■■□□□ 1.56
AP1S3-203ENST00000396654 ROBO1Q9Y6N7 1651 aa24.77■■□□□ 1.56
AP1S3-203ENST00000396654 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
AP1S3-203ENST00000396654 NEUROD1Q13562 356 aa24.76■■□□□ 1.55
AP1S3-203ENST00000396654 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
AP1S3-203ENST00000396654 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
AP1S3-203ENST00000396654 PCGF6Q9BYE7 350 aa24.74■■□□□ 1.55
AP1S3-203ENST00000396654 C14orf93Q9H972 538 aaKnown RBP24.74■■□□□ 1.55
AP1S3-203ENST00000396654 ATF3P18847 181 aa24.73■■□□□ 1.55
AP1S3-203ENST00000396654 C19orf44Q9H6X5 657 aa24.73■■□□□ 1.55
AP1S3-203ENST00000396654 LRPPRCP42704 1394 aaKnown RBP24.72■■□□□ 1.55
AP1S3-203ENST00000396654 YTHDC2Q9H6S0 1430 aaKnown RBP24.71■■□□□ 1.55
AP1S3-203ENST00000396654 ADGRL3Q9HAR2 1447 aa24.71■■□□□ 1.55
AP1S3-203ENST00000396654 SLAIN2Q9P270 581 aa24.71■■□□□ 1.55
AP1S3-203ENST00000396654 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
AP1S3-203ENST00000396654 PRAG1Q86YV5 1406 aa24.69■■□□□ 1.54
AP1S3-203ENST00000396654 WAPLQ7Z5K2 1190 aa24.68■■□□□ 1.54
AP1S3-203ENST00000396654 FAM135BQ49AJ0 1406 aa24.67■■□□□ 1.54
AP1S3-203ENST00000396654 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
AP1S3-203ENST00000396654 TECPR2O15040 1411 aa24.66■■□□□ 1.54
AP1S3-203ENST00000396654 ABCC11Q96J66 1382 aa24.66■■□□□ 1.54
AP1S3-203ENST00000396654 ADGRB1O14514 1584 aa24.65■■□□□ 1.54
AP1S3-203ENST00000396654 DCCP43146 1447 aa24.65■■□□□ 1.54
AP1S3-203ENST00000396654 PHLPP1O60346 1717 aa24.64■■□□□ 1.54
AP1S3-203ENST00000396654 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
AP1S3-203ENST00000396654 STAC3Q96MF2 364 aa24.63■■□□□ 1.53
AP1S3-203ENST00000396654 MST1RQ04912 1400 aa24.62■■□□□ 1.53
AP1S3-203ENST00000396654 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
AP1S3-203ENST00000396654 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
AP1S3-203ENST00000396654 KIAA1210Q9ULL0 1709 aa24.6■■□□□ 1.53
AP1S3-203ENST00000396654 PRAM1Q96QH2 718 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms