RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 PTPRTO14522 1441 aa14.08□□□□□ -0.15
TUBB-208ENST00000396389 CLTCL1P53675 1640 aa14.08□□□□□ -0.16
TUBB-208ENST00000396389 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
TUBB-208ENST00000396389 LMTK2Q8IWU2 1503 aa14.08□□□□□ -0.16
TUBB-208ENST00000396389 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
TUBB-208ENST00000396389 NOS1P29475 1434 aa14.07□□□□□ -0.16
TUBB-208ENST00000396389 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
TUBB-208ENST00000396389 ANO8Q9HCE9 1232 aaPredicted RBP14.07□□□□□ -0.16
TUBB-208ENST00000396389 SYNMO15061 1565 aa14.07□□□□□ -0.16
TUBB-208ENST00000396389 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
TUBB-208ENST00000396389 CFAP70Q5T0N1 1121 aa14.07□□□□□ -0.16
TUBB-208ENST00000396389 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
TUBB-208ENST00000396389 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
TUBB-208ENST00000396389 STK26Q9P289 416 aa14.06□□□□□ -0.16
TUBB-208ENST00000396389 CNTLNQ9NXG0 1405 aa14.06□□□□□ -0.16
TUBB-208ENST00000396389 PTPRMP28827 1452 aa14.05□□□□□ -0.16
TUBB-208ENST00000396389 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
TUBB-208ENST00000396389 TRPM2O94759 1503 aa14.05□□□□□ -0.16
TUBB-208ENST00000396389 SLC26A8Q96RN1 970 aa14.05□□□□□ -0.16
TUBB-208ENST00000396389 ARHGAP31Q2M1Z3 1444 aa14.05□□□□□ -0.16
TUBB-208ENST00000396389 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
TUBB-208ENST00000396389 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
TUBB-208ENST00000396389 LTKP29376 864 aa14.04□□□□□ -0.16
TUBB-208ENST00000396389 TXNDC2Q86VQ3 553 aa14.04□□□□□ -0.16
TUBB-208ENST00000396389 SPATA31E1Q6ZUB1 1445 aa14.03□□□□□ -0.16
TUBB-208ENST00000396389 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
TUBB-208ENST00000396389 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.16
TUBB-208ENST00000396389 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
TUBB-208ENST00000396389 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
TUBB-208ENST00000396389 C3P01024 1663 aa14.01□□□□□ -0.17
TUBB-208ENST00000396389 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
TUBB-208ENST00000396389 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
TUBB-208ENST00000396389 ZC3H13Q5T200 1668 aaKnown RBP14□□□□□ -0.17
TUBB-208ENST00000396389 CCDC184Q52MB2 194 aa14□□□□□ -0.17
TUBB-208ENST00000396389 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
TUBB-208ENST00000396389 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
TUBB-208ENST00000396389 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
TUBB-208ENST00000396389 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
TUBB-208ENST00000396389 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
TUBB-208ENST00000396389 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
TUBB-208ENST00000396389 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
TUBB-208ENST00000396389 PIK3C2BO00750 1634 aa13.97□□□□□ -0.17
TUBB-208ENST00000396389 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
TUBB-208ENST00000396389 SPATA31D1Q6ZQQ2 1576 aa13.97□□□□□ -0.17
TUBB-208ENST00000396389 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
TUBB-208ENST00000396389 EID1Q9Y6B2 187 aa13.97□□□□□ -0.17
TUBB-208ENST00000396389 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.17
TUBB-208ENST00000396389 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.18
TUBB-208ENST00000396389 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
TUBB-208ENST00000396389 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
TUBB-208ENST00000396389 TMEM2Q9UHN6 1383 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 ST20-MTHFSA0A0A6YYL1 179 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
TUBB-208ENST00000396389 MYO5BQ9ULV0 1848 aa13.93□□□□□ -0.18
TUBB-208ENST00000396389 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
TUBB-208ENST00000396389 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
TUBB-208ENST00000396389 NOP58Q9Y2X3 529 aaKnown RBP13.92□□□□□ -0.18
TUBB-208ENST00000396389 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
TUBB-208ENST00000396389 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
TUBB-208ENST00000396389 KIF1BO60333 1816 aa13.91□□□□□ -0.18
TUBB-208ENST00000396389 TMEM131LA2VDJ0 1609 aa13.91□□□□□ -0.18
TUBB-208ENST00000396389 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
TUBB-208ENST00000396389 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
TUBB-208ENST00000396389 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
TUBB-208ENST00000396389 USP47Q96K76 1375 aa13.89□□□□□ -0.19
TUBB-208ENST00000396389 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
TUBB-208ENST00000396389 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
TUBB-208ENST00000396389 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
TUBB-208ENST00000396389 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
TUBB-208ENST00000396389 C14orf93Q9H972 538 aaKnown RBP13.88□□□□□ -0.19
TUBB-208ENST00000396389 NEXMIFQ5QGS0 1516 aa13.88□□□□□ -0.19
TUBB-208ENST00000396389 METP08581 1390 aa13.88□□□□□ -0.19
TUBB-208ENST00000396389 MYO3AQ8NEV4 1616 aa13.88□□□□□ -0.19
TUBB-208ENST00000396389 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
TUBB-208ENST00000396389 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBB-208ENST00000396389 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
TUBB-208ENST00000396389 POGKQ9P215 609 aa13.86□□□□□ -0.19
TUBB-208ENST00000396389 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
TUBB-208ENST00000396389 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
TUBB-208ENST00000396389 ZFYVE9O95405 1425 aa13.85□□□□□ -0.19
TUBB-208ENST00000396389 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
TUBB-208ENST00000396389 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
TUBB-208ENST00000396389 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.19
TUBB-208ENST00000396389 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
TUBB-208ENST00000396389 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
TUBB-208ENST00000396389 KCNA6P17658 529 aa13.82□□□□□ -0.2
TUBB-208ENST00000396389 SCAF11Q99590 1463 aaKnown RBP13.82□□□□□ -0.2
TUBB-208ENST00000396389 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
TUBB-208ENST00000396389 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
TUBB-208ENST00000396389 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
TUBB-208ENST00000396389 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
TUBB-208ENST00000396389 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
TUBB-208ENST00000396389 ARXQ96QS3 562 aa13.8□□□□□ -0.2
TUBB-208ENST00000396389 MRS2Q9HD23 443 aa13.8□□□□□ -0.2
TUBB-208ENST00000396389 MYOM2P54296 1465 aa13.79□□□□□ -0.2
TUBB-208ENST00000396389 PPLO60437 1756 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms