RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 MYO5BQ9ULV0 1848 aa20.26■□□□□ 0.83
RTFDC1-203ENST00000395881 SLIT1O75093 1534 aa20.26■□□□□ 0.83
RTFDC1-203ENST00000395881 HSPA5P11021 654 aaKnown RBP20.25■□□□□ 0.83
RTFDC1-203ENST00000395881 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
RTFDC1-203ENST00000395881 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
RTFDC1-203ENST00000395881 MED14O60244 1454 aa20.24■□□□□ 0.83
RTFDC1-203ENST00000395881 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
RTFDC1-203ENST00000395881 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
RTFDC1-203ENST00000395881 LTKP29376 864 aa20.24■□□□□ 0.83
RTFDC1-203ENST00000395881 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
RTFDC1-203ENST00000395881 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
RTFDC1-203ENST00000395881 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
RTFDC1-203ENST00000395881 NPHP4O75161 1426 aaPredicted RBP20.22■□□□□ 0.83
RTFDC1-203ENST00000395881 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
RTFDC1-203ENST00000395881 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
RTFDC1-203ENST00000395881 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
RTFDC1-203ENST00000395881 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
RTFDC1-203ENST00000395881 LTBP4Q8N2S1 1624 aa20.2■□□□□ 0.82
RTFDC1-203ENST00000395881 ZNF335Q9H4Z2 1342 aaPredicted RBP20.19■□□□□ 0.82
RTFDC1-203ENST00000395881 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
RTFDC1-203ENST00000395881 TRPM2O94759 1503 aa20.18■□□□□ 0.82
RTFDC1-203ENST00000395881 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
RTFDC1-203ENST00000395881 CHGAP10645 457 aaKnown RBP20.17■□□□□ 0.82
RTFDC1-203ENST00000395881 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
RTFDC1-203ENST00000395881 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
RTFDC1-203ENST00000395881 ZFYVE9O95405 1425 aa20.14■□□□□ 0.82
RTFDC1-203ENST00000395881 CCER2I3L3R5 266 aa20.13■□□□□ 0.81
RTFDC1-203ENST00000395881 CCDC7Q96M83 1385 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 LAMC1P11047 1609 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 PRAG1Q86YV5 1406 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 USP47Q96K76 1375 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 ANP32CO43423 234 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 STAC3Q96MF2 364 aa20.12■□□□□ 0.81
RTFDC1-203ENST00000395881 TRPM1Q7Z4N2 1603 aa20.11■□□□□ 0.81
RTFDC1-203ENST00000395881 ILDR1Q86SU0 546 aaPredicted RBP20.11■□□□□ 0.81
RTFDC1-203ENST00000395881 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
RTFDC1-203ENST00000395881 KIF1BO60333 1816 aa20.09■□□□□ 0.81
RTFDC1-203ENST00000395881 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
RTFDC1-203ENST00000395881 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.81
RTFDC1-203ENST00000395881 FBXO41Q8TF61 875 aa20.08■□□□□ 0.8
RTFDC1-203ENST00000395881 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
RTFDC1-203ENST00000395881 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
RTFDC1-203ENST00000395881 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
RTFDC1-203ENST00000395881 CARD11Q9BXL7 1154 aa20.04■□□□□ 0.8
RTFDC1-203ENST00000395881 CPS1P31327 1500 aa20.03■□□□□ 0.8
RTFDC1-203ENST00000395881 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
RTFDC1-203ENST00000395881 IQSEC2Q5JU85 1478 aa20.03■□□□□ 0.8
RTFDC1-203ENST00000395881 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
RTFDC1-203ENST00000395881 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
RTFDC1-203ENST00000395881 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
RTFDC1-203ENST00000395881 BCANQ96GW7 911 aa20.01■□□□□ 0.79
RTFDC1-203ENST00000395881 NEXMIFQ5QGS0 1516 aa20.01■□□□□ 0.79
RTFDC1-203ENST00000395881 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
RTFDC1-203ENST00000395881 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
RTFDC1-203ENST00000395881 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
RTFDC1-203ENST00000395881 TBX22Q9Y458 520 aa19.96■□□□□ 0.79
RTFDC1-203ENST00000395881 KIAA1210Q9ULL0 1709 aa19.96■□□□□ 0.79
RTFDC1-203ENST00000395881 CHD2O14647 1828 aaKnown RBP19.96■□□□□ 0.79
RTFDC1-203ENST00000395881 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
RTFDC1-203ENST00000395881 KCNA6P17658 529 aa19.95■□□□□ 0.78
RTFDC1-203ENST00000395881 PPLO60437 1756 aa19.95■□□□□ 0.78
RTFDC1-203ENST00000395881 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
RTFDC1-203ENST00000395881 XIRP1Q702N8 1843 aaKnown RBP19.94■□□□□ 0.78
RTFDC1-203ENST00000395881 MYOM2P54296 1465 aa19.93■□□□□ 0.78
RTFDC1-203ENST00000395881 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
RTFDC1-203ENST00000395881 NWD1Q149M9 1564 aa19.93■□□□□ 0.78
RTFDC1-203ENST00000395881 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
RTFDC1-203ENST00000395881 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
RTFDC1-203ENST00000395881 IFT172Q9UG01 1749 aa19.91■□□□□ 0.78
RTFDC1-203ENST00000395881 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
RTFDC1-203ENST00000395881 UBAP1LF5GYI3 381 aa19.9■□□□□ 0.78
RTFDC1-203ENST00000395881 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.77
RTFDC1-203ENST00000395881 PIK3R4Q99570 1358 aa19.88■□□□□ 0.77
RTFDC1-203ENST00000395881 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
RTFDC1-203ENST00000395881 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
RTFDC1-203ENST00000395881 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
RTFDC1-203ENST00000395881 PROSER2Q86WR7 435 aaPredicted RBP19.87■□□□□ 0.77
RTFDC1-203ENST00000395881 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
RTFDC1-203ENST00000395881 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
RTFDC1-203ENST00000395881 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
RTFDC1-203ENST00000395881 METP08581 1390 aa19.85■□□□□ 0.77
RTFDC1-203ENST00000395881 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
RTFDC1-203ENST00000395881 NRXN1Q9ULB1 1477 aa19.85■□□□□ 0.77
RTFDC1-203ENST00000395881 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
RTFDC1-203ENST00000395881 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
RTFDC1-203ENST00000395881 TOM1O60784 492 aa19.83■□□□□ 0.76
RTFDC1-203ENST00000395881 AMOTL2Q9Y2J4 779 aa19.83■□□□□ 0.76
RTFDC1-203ENST00000395881 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
RTFDC1-203ENST00000395881 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
RTFDC1-203ENST00000395881 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
RTFDC1-203ENST00000395881 TESK2Q96S53 571 aa19.8■□□□□ 0.76
RTFDC1-203ENST00000395881 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
RTFDC1-203ENST00000395881 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
RTFDC1-203ENST00000395881 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms