RNA–Protein interactions for RNA: ENST00000395260.3

RTKN2-203, Transcript of rhotekin 2, humanhuman

TSL 1 (best) BASIC

Gene RTKN2, Length 2,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN2-203ENST00000395260 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
RTKN2-203ENST00000395260 NRXN1Q9ULB1 1477 aa24.11■■□□□ 1.45
RTKN2-203ENST00000395260 TMF1P82094 1093 aa24.11■■□□□ 1.45
RTKN2-203ENST00000395260 AGLP35573 1532 aa24.11■■□□□ 1.45
RTKN2-203ENST00000395260 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
RTKN2-203ENST00000395260 PPLO60437 1756 aa24.09■■□□□ 1.45
RTKN2-203ENST00000395260 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
RTKN2-203ENST00000395260 RPGRIP1LQ68CZ1 1315 aa24.08■■□□□ 1.44
RTKN2-203ENST00000395260 CCDC184Q52MB2 194 aa24.07■■□□□ 1.44
RTKN2-203ENST00000395260 EIF3AQ14152 1382 aaKnown RBP24.07■■□□□ 1.44
RTKN2-203ENST00000395260 ARHGEF40Q8TER5 1519 aa24.06■■□□□ 1.44
RTKN2-203ENST00000395260 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
RTKN2-203ENST00000395260 PREX1Q8TCU6 1659 aa24.05■■□□□ 1.44
RTKN2-203ENST00000395260 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
RTKN2-203ENST00000395260 PPP6R1Q9UPN7 881 aa24.04■■□□□ 1.44
RTKN2-203ENST00000395260 SLC52A1Q9NWF4 448 aa24.03■■□□□ 1.44
RTKN2-203ENST00000395260 PIK3C2GO75747 1445 aa24.01■■□□□ 1.43
RTKN2-203ENST00000395260 IDI1Q13907 227 aa24.01■■□□□ 1.43
RTKN2-203ENST00000395260 SETBP1Q9Y6X0 1596 aa24■■□□□ 1.43
RTKN2-203ENST00000395260 KTN1Q86UP2 1357 aaKnown RBP23.98■■□□□ 1.43
RTKN2-203ENST00000395260 NEXMIFQ5QGS0 1516 aa23.98■■□□□ 1.43
RTKN2-203ENST00000395260 CLTCQ00610 1675 aaKnown RBP23.98■■□□□ 1.43
RTKN2-203ENST00000395260 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
RTKN2-203ENST00000395260 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
RTKN2-203ENST00000395260 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
RTKN2-203ENST00000395260 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
RTKN2-203ENST00000395260 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
RTKN2-203ENST00000395260 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
RTKN2-203ENST00000395260 FBXO31Q5XUX0 539 aaPredicted RBP23.95■■□□□ 1.42
RTKN2-203ENST00000395260 MLECQ14165 292 aa23.94■■□□□ 1.42
RTKN2-203ENST00000395260 RALBP1Q15311 655 aa23.94■■□□□ 1.42
RTKN2-203ENST00000395260 TMEM131LA2VDJ0 1609 aa23.94■■□□□ 1.42
RTKN2-203ENST00000395260 PER1O15534 1290 aaPredicted RBP23.93■■□□□ 1.42
RTKN2-203ENST00000395260 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
RTKN2-203ENST00000395260 PANK3Q9H999 370 aa23.93■■□□□ 1.42
RTKN2-203ENST00000395260 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
RTKN2-203ENST00000395260 MYO5BQ9ULV0 1848 aa23.92■■□□□ 1.42
RTKN2-203ENST00000395260 ADGRB1O14514 1584 aa23.91■■□□□ 1.42
RTKN2-203ENST00000395260 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
RTKN2-203ENST00000395260 MYBBP1AQ9BQG0 1328 aaKnown RBP23.9■■□□□ 1.42
RTKN2-203ENST00000395260 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
RTKN2-203ENST00000395260 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.41
RTKN2-203ENST00000395260 PARD3Q8TEW0 1356 aa23.87■■□□□ 1.41
RTKN2-203ENST00000395260 SPATA31D1Q6ZQQ2 1576 aa23.87■■□□□ 1.41
RTKN2-203ENST00000395260 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
RTKN2-203ENST00000395260 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
RTKN2-203ENST00000395260 ESF1Q9H501 851 aaKnown RBP23.86■■□□□ 1.41
RTKN2-203ENST00000395260 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
RTKN2-203ENST00000395260 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
RTKN2-203ENST00000395260 SBNO2Q9Y2G9 1366 aa23.86■■□□□ 1.41
RTKN2-203ENST00000395260 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
RTKN2-203ENST00000395260 MYOM1P52179 1685 aa23.84■■□□□ 1.41
RTKN2-203ENST00000395260 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
RTKN2-203ENST00000395260 CC2D1BQ5T0F9 858 aaKnown RBP23.82■■□□□ 1.4
RTKN2-203ENST00000395260 QRICH2Q9H0J4 1663 aa23.81■■□□□ 1.4
RTKN2-203ENST00000395260 NLRP13Q86W25 1043 aa23.79■■□□□ 1.4
RTKN2-203ENST00000395260 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
RTKN2-203ENST00000395260 KNSTRNQ9Y448 316 aa23.79■■□□□ 1.4
RTKN2-203ENST00000395260 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
RTKN2-203ENST00000395260 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
RTKN2-203ENST00000395260 A2ML1A8K2U0 1454 aa23.76■■□□□ 1.39
RTKN2-203ENST00000395260 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
RTKN2-203ENST00000395260 TRHP20396 242 aaPredicted RBP23.73■■□□□ 1.39
RTKN2-203ENST00000395260 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
RTKN2-203ENST00000395260 ASXL1Q8IXJ9 1541 aa23.73■■□□□ 1.39
RTKN2-203ENST00000395260 SUPT16HQ9Y5B9 1047 aaKnown RBP23.72■■□□□ 1.39
RTKN2-203ENST00000395260 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
RTKN2-203ENST00000395260 AMER1Q5JTC6 1135 aaPredicted RBP23.71■■□□□ 1.39
RTKN2-203ENST00000395260 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
RTKN2-203ENST00000395260 ALKQ9UM73 1620 aa23.69■■□□□ 1.38
RTKN2-203ENST00000395260 NPC1L1Q9UHC9 1359 aa23.68■■□□□ 1.38
RTKN2-203ENST00000395260 STK26Q9P289 416 aa23.68■■□□□ 1.38
RTKN2-203ENST00000395260 TNRQ92752 1358 aa23.67■■□□□ 1.38
RTKN2-203ENST00000395260 YTHDC2Q9H6S0 1430 aaKnown RBP23.66■■□□□ 1.38
RTKN2-203ENST00000395260 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
RTKN2-203ENST00000395260 NEFLP07196 543 aa23.64■■□□□ 1.38
RTKN2-203ENST00000395260 TULP4Q9NRJ4 1543 aa23.63■■□□□ 1.37
RTKN2-203ENST00000395260 PTPRMP28827 1452 aa23.63■■□□□ 1.37
RTKN2-203ENST00000395260 PUS7Q96PZ0 661 aaKnown RBP23.63■■□□□ 1.37
RTKN2-203ENST00000395260 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.62■■□□□ 1.37
RTKN2-203ENST00000395260 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
RTKN2-203ENST00000395260 SAFB2Q14151 953 aaKnown RBP eCLIP23.61■■□□□ 1.37
RTKN2-203ENST00000395260 FKBP8Q14318 412 aa23.61■■□□□ 1.37
RTKN2-203ENST00000395260 PPP2R1AP30153 589 aa23.61■■□□□ 1.37
RTKN2-203ENST00000395260 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
RTKN2-203ENST00000395260 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
RTKN2-203ENST00000395260 POGKQ9P215 609 aa23.58■■□□□ 1.37
RTKN2-203ENST00000395260 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.36
RTKN2-203ENST00000395260 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
RTKN2-203ENST00000395260 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
RTKN2-203ENST00000395260 NSD3Q9BZ95 1437 aa23.55■■□□□ 1.36
RTKN2-203ENST00000395260 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
RTKN2-203ENST00000395260 CABP2Q9NPB3 220 aa23.55■■□□□ 1.36
RTKN2-203ENST00000395260 INSRP06213 1382 aa23.54■■□□□ 1.36
RTKN2-203ENST00000395260 FER1L4A9Z1Z3 1794 aa23.53■■□□□ 1.36
RTKN2-203ENST00000395260 MINK1Q8N4C8 1332 aaPredicted RBP23.53■■□□□ 1.36
RTKN2-203ENST00000395260 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
RTKN2-203ENST00000395260 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
RTKN2-203ENST00000395260 NLRP1Q9C000 1473 aa23.52■■□□□ 1.36
RTKN2-203ENST00000395260 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms