RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
AFF1-202ENST00000395146 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
AFF1-202ENST00000395146 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
AFF1-202ENST00000395146 NUCB2P80303 420 aa13.2□□□□□ -0.3
AFF1-202ENST00000395146 GAPVD1Q14C86 1478 aa13.2□□□□□ -0.3
AFF1-202ENST00000395146 CLSTN1O94985 981 aa13.19□□□□□ -0.3
AFF1-202ENST00000395146 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
AFF1-202ENST00000395146 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
AFF1-202ENST00000395146 BECN2A8MW95 431 aa13.18□□□□□ -0.3
AFF1-202ENST00000395146 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
AFF1-202ENST00000395146 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
AFF1-202ENST00000395146 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
AFF1-202ENST00000395146 C22orf23Q9BZE7 217 aa13.18□□□□□ -0.3
AFF1-202ENST00000395146 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
AFF1-202ENST00000395146 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
AFF1-202ENST00000395146 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
AFF1-202ENST00000395146 RIPK4P57078 832 aa13.17□□□□□ -0.3
AFF1-202ENST00000395146 MRE11P49959 708 aa13.16□□□□□ -0.3
AFF1-202ENST00000395146 GNAI1P63096 354 aa13.15□□□□□ -0.3
AFF1-202ENST00000395146 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
AFF1-202ENST00000395146 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
AFF1-202ENST00000395146 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
AFF1-202ENST00000395146 CDC45O75419 566 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 GPS2Q13227 327 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
AFF1-202ENST00000395146 TPM1P09493 284 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
AFF1-202ENST00000395146 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
AFF1-202ENST00000395146 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
AFF1-202ENST00000395146 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
AFF1-202ENST00000395146 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
AFF1-202ENST00000395146 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
AFF1-202ENST00000395146 SCAPERQ9BY12 1400 aa13.12□□□□□ -0.31
AFF1-202ENST00000395146 C1orf141Q5JVX7 400 aa13.12□□□□□ -0.31
AFF1-202ENST00000395146 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
AFF1-202ENST00000395146 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
AFF1-202ENST00000395146 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
AFF1-202ENST00000395146 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
AFF1-202ENST00000395146 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
AFF1-202ENST00000395146 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
AFF1-202ENST00000395146 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
AFF1-202ENST00000395146 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
AFF1-202ENST00000395146 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 TEFQ10587 303 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
AFF1-202ENST00000395146 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
AFF1-202ENST00000395146 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
AFF1-202ENST00000395146 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
AFF1-202ENST00000395146 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
AFF1-202ENST00000395146 LNPKQ9C0E8 428 aa13.09□□□□□ -0.31
AFF1-202ENST00000395146 ZNF644Q9H582 1327 aaPredicted RBP13.09□□□□□ -0.31
AFF1-202ENST00000395146 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
AFF1-202ENST00000395146 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
AFF1-202ENST00000395146 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
AFF1-202ENST00000395146 TPM2P07951 284 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.32
AFF1-202ENST00000395146 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
AFF1-202ENST00000395146 ERC2O15083 957 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 SYNE3Q6ZMZ3 975 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
AFF1-202ENST00000395146 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
AFF1-202ENST00000395146 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
AFF1-202ENST00000395146 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
AFF1-202ENST00000395146 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
AFF1-202ENST00000395146 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
AFF1-202ENST00000395146 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
AFF1-202ENST00000395146 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
AFF1-202ENST00000395146 ZNF592Q92610 1267 aa13.07□□□□□ -0.32
AFF1-202ENST00000395146 TRIM29Q14134 588 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
AFF1-202ENST00000395146 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
AFF1-202ENST00000395146 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
AFF1-202ENST00000395146 TRAK2O60296 914 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 MBD3O95983 291 aa13.06□□□□□ -0.32
AFF1-202ENST00000395146 SASS6Q6UVJ0 657 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 CFTRP13569 1480 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 CPLX1O14810 134 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 TEX35Q5T0J7 233 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 CCAR2Q8N163 923 aaKnown RBP13.05□□□□□ -0.32
AFF1-202ENST00000395146 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.324e-7■■□□□ 13.8
AFF1-202ENST00000395146 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 VPS37CA5D8V6 355 aaPredicted RBP13.05□□□□□ -0.32
AFF1-202ENST00000395146 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 PES1O00541 588 aaKnown RBP13.05□□□□□ -0.32
AFF1-202ENST00000395146 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
AFF1-202ENST00000395146 BACH2Q9BYV9 841 aa13.05□□□□□ -0.32
AFF1-202ENST00000395146 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms