RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ANKRD50Q9ULJ7 1429 aa9.83□□□□□ -0.84
SMARCAD1-203ENST00000394961 NHSL1Q5SYE7 1610 aa9.83□□□□□ -0.84
SMARCAD1-203ENST00000394961 KIF1BO60333 1816 aa9.82□□□□□ -0.84
SMARCAD1-203ENST00000394961 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
SMARCAD1-203ENST00000394961 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
SMARCAD1-203ENST00000394961 PHLPP1O60346 1717 aa9.81□□□□□ -0.84
SMARCAD1-203ENST00000394961 DCCP43146 1447 aa9.81□□□□□ -0.84
SMARCAD1-203ENST00000394961 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.81□□□□□ -0.84
SMARCAD1-203ENST00000394961 IFT172Q9UG01 1749 aa9.81□□□□□ -0.84
SMARCAD1-203ENST00000394961 UBAP1LF5GYI3 381 aa9.8□□□□□ -0.84
SMARCAD1-203ENST00000394961 KNDC1Q76NI1 1749 aa9.79□□□□□ -0.84
SMARCAD1-203ENST00000394961 RRBP1Q9P2E9 1410 aaKnown RBP9.79□□□□□ -0.84
SMARCAD1-203ENST00000394961 PPLO60437 1756 aa9.78□□□□□ -0.84
SMARCAD1-203ENST00000394961 KCNA6P17658 529 aa9.78□□□□□ -0.84
SMARCAD1-203ENST00000394961 NEXMIFQ5QGS0 1516 aa9.77□□□□□ -0.85
SMARCAD1-203ENST00000394961 LTKP29376 864 aa9.77□□□□□ -0.85
SMARCAD1-203ENST00000394961 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
SMARCAD1-203ENST00000394961 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
SMARCAD1-203ENST00000394961 EID1Q9Y6B2 187 aa9.76□□□□□ -0.85
SMARCAD1-203ENST00000394961 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
SMARCAD1-203ENST00000394961 RIMS2Q9UQ26 1411 aa9.76□□□□□ -0.85
SMARCAD1-203ENST00000394961 COL22A1Q8NFW1 1626 aaPredicted RBP9.75□□□□□ -0.85
SMARCAD1-203ENST00000394961 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCAD1-203ENST00000394961 NALCNQ8IZF0 1738 aa9.74□□□□□ -0.85
SMARCAD1-203ENST00000394961 HSPA1LP34931 641 aa9.74□□□□□ -0.85
SMARCAD1-203ENST00000394961 TBX22Q9Y458 520 aa9.74□□□□□ -0.85
SMARCAD1-203ENST00000394961 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
SMARCAD1-203ENST00000394961 APLP2Q06481 763 aa9.73□□□□□ -0.85
SMARCAD1-203ENST00000394961 IDI1Q13907 227 aa9.73□□□□□ -0.85
SMARCAD1-203ENST00000394961 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
SMARCAD1-203ENST00000394961 LOC105371045A0A1W2PR82 267 aa9.72□□□□□ -0.85
SMARCAD1-203ENST00000394961 RRP7BPQ9NSQ0 103 aa9.72□□□□□ -0.85
SMARCAD1-203ENST00000394961 MARF1Q9Y4F3 1742 aaKnown RBP9.72□□□□□ -0.85
SMARCAD1-203ENST00000394961 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
SMARCAD1-203ENST00000394961 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
SMARCAD1-203ENST00000394961 TMEM94Q12767 1356 aa9.71□□□□□ -0.86
SMARCAD1-203ENST00000394961 PTCH1Q13635 1447 aa9.7□□□□□ -0.86
SMARCAD1-203ENST00000394961 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.69□□□□□ -0.86
SMARCAD1-203ENST00000394961 HFM1A2PYH4 1435 aa9.69□□□□□ -0.86
SMARCAD1-203ENST00000394961 MSH6P52701 1360 aa9.68□□□□□ -0.86
SMARCAD1-203ENST00000394961 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
SMARCAD1-203ENST00000394961 SETD5Q9C0A6 1442 aa9.67□□□□□ -0.86
SMARCAD1-203ENST00000394961 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
SMARCAD1-203ENST00000394961 NAIPQ13075 1403 aa9.67□□□□□ -0.86
SMARCAD1-203ENST00000394961 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
SMARCAD1-203ENST00000394961 KIF1AQ12756 1690 aa9.66□□□□□ -0.86
SMARCAD1-203ENST00000394961 JCADQ9P266 1359 aa9.66□□□□□ -0.86
SMARCAD1-203ENST00000394961 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
SMARCAD1-203ENST00000394961 ADGRL3Q9HAR2 1447 aa9.65□□□□□ -0.86
SMARCAD1-203ENST00000394961 TECPR2O15040 1411 aa9.65□□□□□ -0.87
SMARCAD1-203ENST00000394961 MST1RQ04912 1400 aa9.64□□□□□ -0.87
SMARCAD1-203ENST00000394961 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
SMARCAD1-203ENST00000394961 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
SMARCAD1-203ENST00000394961 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
SMARCAD1-203ENST00000394961 ADGRB2O60241 1585 aa9.62□□□□□ -0.87
SMARCAD1-203ENST00000394961 LRP6O75581 1613 aa9.62□□□□□ -0.87
SMARCAD1-203ENST00000394961 RGS17Q9UGC6 210 aaPredicted RBP9.61□□□□□ -0.87
SMARCAD1-203ENST00000394961 NUP155O75694 1391 aa9.61□□□□□ -0.87
SMARCAD1-203ENST00000394961 MYOM2P54296 1465 aa9.6□□□□□ -0.87
SMARCAD1-203ENST00000394961 PIP4K2BP78356 416 aa9.6□□□□□ -0.87
SMARCAD1-203ENST00000394961 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
SMARCAD1-203ENST00000394961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.6□□□□□ -0.874e-6■□□□□ 11.3
SMARCAD1-203ENST00000394961 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
SMARCAD1-203ENST00000394961 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
SMARCAD1-203ENST00000394961 ABCA3Q99758 1704 aa9.59□□□□□ -0.87
SMARCAD1-203ENST00000394961 DLC1Q96QB1 1528 aa9.59□□□□□ -0.87
SMARCAD1-203ENST00000394961 C19orf44Q9H6X5 657 aa9.59□□□□□ -0.87
SMARCAD1-203ENST00000394961 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
SMARCAD1-203ENST00000394961 CHIC2Q9UKJ5 165 aa9.59□□□□□ -0.87
SMARCAD1-203ENST00000394961 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
SMARCAD1-203ENST00000394961 NWD2Q9ULI1 1742 aa9.58□□□□□ -0.88
SMARCAD1-203ENST00000394961 KIAA1210Q9ULL0 1709 aa9.57□□□□□ -0.88
SMARCAD1-203ENST00000394961 FAM50AQ14320 339 aaKnown RBP9.57□□□□□ -0.88
SMARCAD1-203ENST00000394961 CRYBG1Q9Y4K1 1723 aa9.57□□□□□ -0.88
SMARCAD1-203ENST00000394961 SLC26A8Q96RN1 970 aa9.55□□□□□ -0.88
SMARCAD1-203ENST00000394961 C1orf167Q5SNV9 1468 aa9.55□□□□□ -0.88
SMARCAD1-203ENST00000394961 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
SMARCAD1-203ENST00000394961 METP08581 1390 aa9.54□□□□□ -0.88
SMARCAD1-203ENST00000394961 PXDNQ92626 1479 aa9.54□□□□□ -0.88
SMARCAD1-203ENST00000394961 PIK3C2GO75747 1445 aa9.54□□□□□ -0.88
SMARCAD1-203ENST00000394961 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
SMARCAD1-203ENST00000394961 TRPM3Q9HCF6 1732 aaPredicted RBP9.53□□□□□ -0.88
SMARCAD1-203ENST00000394961 ANKRD30BQ9BXX2 1392 aa9.53□□□□□ -0.88
SMARCAD1-203ENST00000394961 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
SMARCAD1-203ENST00000394961 PNPLA6Q8IY17 1366 aa9.52□□□□□ -0.88
SMARCAD1-203ENST00000394961 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
SMARCAD1-203ENST00000394961 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
SMARCAD1-203ENST00000394961 SCAF1Q9H7N4 1312 aaKnown RBP9.52□□□□□ -0.89
SMARCAD1-203ENST00000394961 ZNF772Q68DY9 489 aaPredicted RBP9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 ALS2Q96Q42 1657 aa9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 NRAPQ86VF7 1730 aa9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 BRINP3Q76B58 766 aa9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 SOS2Q07890 1332 aaPredicted RBP9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 USP32Q8NFA0 1604 aa9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 LRPPRCP42704 1394 aaKnown RBP9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
SMARCAD1-203ENST00000394961 VGFO15240 615 aaPredicted RBP9.5□□□□□ -0.89
SMARCAD1-203ENST00000394961 PLCH1Q4KWH8 1693 aa9.5□□□□□ -0.89
SMARCAD1-203ENST00000394961 TOPAZ1Q8N9V7 1692 aa9.5□□□□□ -0.89
SMARCAD1-203ENST00000394961 ATF3P18847 181 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms