RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 CHMP3Q9Y3E7 222 aa19.03■□□□□ 0.64
SPOCK1-202ENST00000394945 CCDC34Q96HJ3 373 aa19.03■□□□□ 0.64
SPOCK1-202ENST00000394945 MCM4P33991 863 aa19.02■□□□□ 0.64
SPOCK1-202ENST00000394945 AAMPQ13685 434 aa19.02■□□□□ 0.64
SPOCK1-202ENST00000394945 STK26Q9P289 416 aa19.02■□□□□ 0.64
SPOCK1-202ENST00000394945 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
SPOCK1-202ENST00000394945 HOMER1Q86YM7 354 aa19.02■□□□□ 0.63
SPOCK1-202ENST00000394945 KIF3AQ9Y496 699 aa19.02■□□□□ 0.63
SPOCK1-202ENST00000394945 GPATCH3Q96I76 525 aa19.01■□□□□ 0.63
SPOCK1-202ENST00000394945 BRD4O60885 1362 aaPredicted RBP19.01■□□□□ 0.63
SPOCK1-202ENST00000394945 ZMYND15Q9H091 742 aa19■□□□□ 0.63
SPOCK1-202ENST00000394945 CCDC184Q52MB2 194 aa19■□□□□ 0.63
SPOCK1-202ENST00000394945 UQCRHLA0A096LP55 91 aa19■□□□□ 0.63
SPOCK1-202ENST00000394945 UQCRHP07919 91 aa19■□□□□ 0.63
SPOCK1-202ENST00000394945 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
SPOCK1-202ENST00000394945 H3BQV1 296 aa18.99■□□□□ 0.63
SPOCK1-202ENST00000394945 IFFO2Q5TF58 517 aa18.99■□□□□ 0.63
SPOCK1-202ENST00000394945 BCL11BQ9C0K0 894 aaPredicted RBP18.99■□□□□ 0.63
SPOCK1-202ENST00000394945 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPOCK1-202ENST00000394945 ARGLU1Q9NWB6 273 aaPredicted RBP18.98■□□□□ 0.63
SPOCK1-202ENST00000394945 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
SPOCK1-202ENST00000394945 MBD3O95983 291 aa18.97■□□□□ 0.63
SPOCK1-202ENST00000394945 PRPF40AO75400 957 aaKnown RBP18.96■□□□□ 0.63
SPOCK1-202ENST00000394945 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
SPOCK1-202ENST00000394945 CREBRFQ8IUR6 639 aa18.96■□□□□ 0.63
SPOCK1-202ENST00000394945 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
SPOCK1-202ENST00000394945 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
SPOCK1-202ENST00000394945 INTS3Q68E01 1043 aaKnown RBP18.95■□□□□ 0.62
SPOCK1-202ENST00000394945 NOM1Q5C9Z4 860 aaKnown RBP18.95■□□□□ 0.62
SPOCK1-202ENST00000394945 FAM184AQ8NB25 1140 aa18.95■□□□□ 0.62
SPOCK1-202ENST00000394945 ZSCAN30Q86W11 494 aa18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 MNS1Q8NEH6 495 aa18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 BICD2Q8TD16 824 aa18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 ANO2Q9NQ90 1003 aa18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
SPOCK1-202ENST00000394945 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
SPOCK1-202ENST00000394945 PDCL3Q9H2J4 239 aa18.93■□□□□ 0.62
SPOCK1-202ENST00000394945 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
SPOCK1-202ENST00000394945 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
SPOCK1-202ENST00000394945 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
SPOCK1-202ENST00000394945 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
SPOCK1-202ENST00000394945 SASS6Q6UVJ0 657 aa18.92■□□□□ 0.62
SPOCK1-202ENST00000394945 TSPY26PQ9H489 355 aa18.91■□□□□ 0.62
SPOCK1-202ENST00000394945 CDC45O75419 566 aa18.91■□□□□ 0.62
SPOCK1-202ENST00000394945 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
SPOCK1-202ENST00000394945 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
SPOCK1-202ENST00000394945 NESP48681 1621 aa18.9■□□□□ 0.62
SPOCK1-202ENST00000394945 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.62
SPOCK1-202ENST00000394945 MPNDQ8N594 471 aa18.9■□□□□ 0.62
SPOCK1-202ENST00000394945 TPD52L1Q16890 204 aaPredicted RBP18.9■□□□□ 0.62
SPOCK1-202ENST00000394945 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.61
SPOCK1-202ENST00000394945 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
SPOCK1-202ENST00000394945 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
SPOCK1-202ENST00000394945 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
SPOCK1-202ENST00000394945 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
SPOCK1-202ENST00000394945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.87■□□□□ 0.61
SPOCK1-202ENST00000394945 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
SPOCK1-202ENST00000394945 RUNDC1Q96C34 613 aa18.87■□□□□ 0.61
SPOCK1-202ENST00000394945 APPP05067 770 aa18.87■□□□□ 0.61
SPOCK1-202ENST00000394945 KIF3BO15066 747 aa18.87■□□□□ 0.61
SPOCK1-202ENST00000394945 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
SPOCK1-202ENST00000394945 TRIM5Q9C035 493 aa18.86■□□□□ 0.61
SPOCK1-202ENST00000394945 API5Q9BZZ5 524 aaKnown RBP18.86■□□□□ 0.61
SPOCK1-202ENST00000394945 PRDM10Q9NQV6 1147 aa18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 TPM1P09493 284 aa18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 PTPRGP23470 1445 aa18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 TSR1Q2NL82 804 aaKnown RBP18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 CCDC70Q6NSX1 233 aa18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 CIZ1Q9ULV3 898 aaPredicted RBP18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 TRAK1Q9UPV9 953 aa18.85■□□□□ 0.61
SPOCK1-202ENST00000394945 PES1O00541 588 aaKnown RBP18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 RABEP1Q15276 862 aa18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 CFTRP13569 1480 aa18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 BCAR3O75815 825 aa18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 RUFY2Q8WXA3 655 aa18.84■□□□□ 0.61
SPOCK1-202ENST00000394945 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.61
SPOCK1-202ENST00000394945 NPHP1O15259 732 aa18.83■□□□□ 0.6
SPOCK1-202ENST00000394945 SKAP1Q86WV1 359 aa18.83■□□□□ 0.6
SPOCK1-202ENST00000394945 GORABQ5T7V8 394 aa18.82■□□□□ 0.6
SPOCK1-202ENST00000394945 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
SPOCK1-202ENST00000394945 NEK4P51957 841 aa18.82■□□□□ 0.6
SPOCK1-202ENST00000394945 SPC24Q8NBT2 197 aa18.82■□□□□ 0.6
SPOCK1-202ENST00000394945 RIPK4P57078 832 aa18.81■□□□□ 0.6
SPOCK1-202ENST00000394945 ACBD3Q9H3P7 528 aa18.81■□□□□ 0.6
SPOCK1-202ENST00000394945 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
SPOCK1-202ENST00000394945 CHMP4CQ96CF2 233 aa18.81■□□□□ 0.6
SPOCK1-202ENST00000394945 FBXW7Q969H0 707 aa18.81■□□□□ 0.6
SPOCK1-202ENST00000394945 PDCL2Q8N4E4 241 aa18.8■□□□□ 0.6
SPOCK1-202ENST00000394945 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
SPOCK1-202ENST00000394945 CCDC73Q6ZRK6 1079 aa18.8■□□□□ 0.6
SPOCK1-202ENST00000394945 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
SPOCK1-202ENST00000394945 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
SPOCK1-202ENST00000394945 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
SPOCK1-202ENST00000394945 KIF21BO75037 1637 aa18.79■□□□□ 0.6
SPOCK1-202ENST00000394945 TAF3Q5VWG9 929 aa18.79■□□□□ 0.6
SPOCK1-202ENST00000394945 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
SPOCK1-202ENST00000394945 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
SPOCK1-202ENST00000394945 CBX1P83916 185 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms