RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.92
CCT4-201ENST00000394440 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.92
CCT4-201ENST00000394440 CENPBP07199 599 aaPredicted RBP20.82■□□□□ 0.92
CCT4-201ENST00000394440 CCER2I3L3R5 266 aa20.82■□□□□ 0.92
CCT4-201ENST00000394440 MYO5BQ9ULV0 1848 aa20.79■□□□□ 0.92
CCT4-201ENST00000394440 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
CCT4-201ENST00000394440 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
CCT4-201ENST00000394440 SCAF11Q99590 1463 aaKnown RBP20.78■□□□□ 0.92
CCT4-201ENST00000394440 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
CCT4-201ENST00000394440 TESK2Q96S53 571 aa20.77■□□□□ 0.92
CCT4-201ENST00000394440 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
CCT4-201ENST00000394440 RPGRIP1LQ68CZ1 1315 aa20.76■□□□□ 0.91
CCT4-201ENST00000394440 SETBP1Q9Y6X0 1596 aa20.75■□□□□ 0.91
CCT4-201ENST00000394440 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
CCT4-201ENST00000394440 SPATA31D1Q6ZQQ2 1576 aa20.75■□□□□ 0.91
CCT4-201ENST00000394440 SLC52A1Q9NWF4 448 aa20.75■□□□□ 0.91
CCT4-201ENST00000394440 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
CCT4-201ENST00000394440 IDI1Q13907 227 aa20.72■□□□□ 0.91
CCT4-201ENST00000394440 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
CCT4-201ENST00000394440 DISP3Q9P2K9 1392 aa20.71■□□□□ 0.91
CCT4-201ENST00000394440 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
CCT4-201ENST00000394440 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
CCT4-201ENST00000394440 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
CCT4-201ENST00000394440 ZFYVE9O95405 1425 aa20.68■□□□□ 0.9
CCT4-201ENST00000394440 FBXO31Q5XUX0 539 aaPredicted RBP20.68■□□□□ 0.9
CCT4-201ENST00000394440 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
CCT4-201ENST00000394440 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
CCT4-201ENST00000394440 MLECQ14165 292 aa20.65■□□□□ 0.9
CCT4-201ENST00000394440 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
CCT4-201ENST00000394440 TMF1P82094 1093 aa20.64■□□□□ 0.89
CCT4-201ENST00000394440 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
CCT4-201ENST00000394440 ZMYM3Q14202 1370 aa20.61■□□□□ 0.89
CCT4-201ENST00000394440 MYOM1P52179 1685 aa20.6■□□□□ 0.89
CCT4-201ENST00000394440 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
CCT4-201ENST00000394440 A2ML1A8K2U0 1454 aa20.59■□□□□ 0.89
CCT4-201ENST00000394440 KDM5AP29375 1690 aaKnown RBP20.59■□□□□ 0.89
CCT4-201ENST00000394440 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.88
CCT4-201ENST00000394440 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
CCT4-201ENST00000394440 QRICH2Q9H0J4 1663 aa20.57■□□□□ 0.88
CCT4-201ENST00000394440 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
CCT4-201ENST00000394440 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
CCT4-201ENST00000394440 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
CCT4-201ENST00000394440 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
CCT4-201ENST00000394440 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
CCT4-201ENST00000394440 SLC24A1O60721 1099 aa20.53■□□□□ 0.88
CCT4-201ENST00000394440 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
CCT4-201ENST00000394440 ADAMTSL3P82987 1691 aa20.53■□□□□ 0.88
CCT4-201ENST00000394440 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
CCT4-201ENST00000394440 FER1L4A9Z1Z3 1794 aa20.52■□□□□ 0.88
CCT4-201ENST00000394440 SETD1AO15047 1707 aaKnown RBP20.51■□□□□ 0.87
CCT4-201ENST00000394440 C3P01024 1663 aa20.5■□□□□ 0.87
CCT4-201ENST00000394440 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
CCT4-201ENST00000394440 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
CCT4-201ENST00000394440 ALKQ9UM73 1620 aa20.5■□□□□ 0.87
CCT4-201ENST00000394440 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
CCT4-201ENST00000394440 TNRQ92752 1358 aa20.49■□□□□ 0.87
CCT4-201ENST00000394440 RIMS2Q9UQ26 1411 aa20.48■□□□□ 0.87
CCT4-201ENST00000394440 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
CCT4-201ENST00000394440 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
CCT4-201ENST00000394440 PARD3Q8TEW0 1356 aa20.48■□□□□ 0.87
CCT4-201ENST00000394440 PANK3Q9H999 370 aa20.47■□□□□ 0.87
CCT4-201ENST00000394440 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
CCT4-201ENST00000394440 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
CCT4-201ENST00000394440 RALBP1Q15311 655 aa20.46■□□□□ 0.87
CCT4-201ENST00000394440 PTPRMP28827 1452 aa20.44■□□□□ 0.86
CCT4-201ENST00000394440 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
CCT4-201ENST00000394440 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
CCT4-201ENST00000394440 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
CCT4-201ENST00000394440 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
CCT4-201ENST00000394440 RIMS1Q86UR5 1692 aaKnown RBP20.41■□□□□ 0.86
CCT4-201ENST00000394440 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
CCT4-201ENST00000394440 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
CCT4-201ENST00000394440 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
CCT4-201ENST00000394440 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
CCT4-201ENST00000394440 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCT4-201ENST00000394440 TMEM2Q9UHN6 1383 aa20.37■□□□□ 0.85
CCT4-201ENST00000394440 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
CCT4-201ENST00000394440 PUS7Q96PZ0 661 aaKnown RBP20.35■□□□□ 0.85
CCT4-201ENST00000394440 FAM9BQ8IZU0 186 aa20.35■□□□□ 0.85
CCT4-201ENST00000394440 CEBPAP49715 358 aaPredicted RBP20.34■□□□□ 0.85
CCT4-201ENST00000394440 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
CCT4-201ENST00000394440 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
CCT4-201ENST00000394440 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
CCT4-201ENST00000394440 NLRP13Q86W25 1043 aa20.33■□□□□ 0.84
CCT4-201ENST00000394440 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.84
CCT4-201ENST00000394440 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
CCT4-201ENST00000394440 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
CCT4-201ENST00000394440 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
CCT4-201ENST00000394440 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
CCT4-201ENST00000394440 STK26Q9P289 416 aa20.31■□□□□ 0.84
CCT4-201ENST00000394440 SLIT1O75093 1534 aa20.31■□□□□ 0.84
CCT4-201ENST00000394440 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
CCT4-201ENST00000394440 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
CCT4-201ENST00000394440 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
CCT4-201ENST00000394440 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
CCT4-201ENST00000394440 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
CCT4-201ENST00000394440 ABCC11Q96J66 1382 aa20.29■□□□□ 0.84
CCT4-201ENST00000394440 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
CCT4-201ENST00000394440 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
CCT4-201ENST00000394440 METP08581 1390 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms