RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 PPP2R1AP30153 589 aa26.02■■□□□ 1.76
RCCD1-201ENST00000394258 CDCA8Q53HL2 280 aa26.02■■□□□ 1.76
RCCD1-201ENST00000394258 GGT6Q6P531 493 aa26.02■■□□□ 1.76
RCCD1-201ENST00000394258 IQGAP1P46940 1657 aa26.02■■□□□ 1.76
RCCD1-201ENST00000394258 AMER1Q5JTC6 1135 aaPredicted RBP26.01■■□□□ 1.76
RCCD1-201ENST00000394258 PDE3BQ13370 1112 aa26.01■■□□□ 1.75
RCCD1-201ENST00000394258 VWDEQ8N2E2 1590 aa26■■□□□ 1.75
RCCD1-201ENST00000394258 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
RCCD1-201ENST00000394258 MROH1Q8NDA8 1641 aa25.98■■□□□ 1.75
RCCD1-201ENST00000394258 PLIN1O60240 522 aa25.97■■□□□ 1.75
RCCD1-201ENST00000394258 CFAP65Q6ZU64 1925 aaKnown RBP25.97■■□□□ 1.75
RCCD1-201ENST00000394258 WDR43Q15061 677 aaKnown RBP eCLIP25.96■■□□□ 1.75
RCCD1-201ENST00000394258 EIF3AQ14152 1382 aaKnown RBP25.96■■□□□ 1.75
RCCD1-201ENST00000394258 KIDINS220Q9ULH0 1771 aa25.95■■□□□ 1.75
RCCD1-201ENST00000394258 BLMP54132 1417 aaPredicted RBP25.94■■□□□ 1.74
RCCD1-201ENST00000394258 CD109Q6YHK3 1445 aa25.92■■□□□ 1.74
RCCD1-201ENST00000394258 DEKP35659 375 aaKnown RBP25.92■■□□□ 1.74
RCCD1-201ENST00000394258 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
RCCD1-201ENST00000394258 EFCAB6Q5THR3 1501 aa25.89■■□□□ 1.74
RCCD1-201ENST00000394258 PPRC1Q5VV67 1664 aaKnown RBP25.89■■□□□ 1.73
RCCD1-201ENST00000394258 RAPGEF3O95398 923 aa25.88■■□□□ 1.73
RCCD1-201ENST00000394258 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
RCCD1-201ENST00000394258 NBR1Q14596 966 aa25.88■■□□□ 1.73
RCCD1-201ENST00000394258 CCDC146Q8IYE0 955 aa25.87■■□□□ 1.73
RCCD1-201ENST00000394258 MAP3K4Q9Y6R4 1608 aa25.87■■□□□ 1.73
RCCD1-201ENST00000394258 KIF1BO60333 1816 aa25.87■■□□□ 1.73
RCCD1-201ENST00000394258 NOS1P29475 1434 aa25.87■■□□□ 1.73
RCCD1-201ENST00000394258 SYNMO15061 1565 aa25.87■■□□□ 1.73
RCCD1-201ENST00000394258 NUTM2DQ5VT03 806 aaPredicted RBP25.87■■□□□ 1.73
RCCD1-201ENST00000394258 ABCA6Q8N139 1617 aa25.86■■□□□ 1.73
RCCD1-201ENST00000394258 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
RCCD1-201ENST00000394258 PAK3O75914 559 aaPredicted RBP25.86■■□□□ 1.73
RCCD1-201ENST00000394258 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
RCCD1-201ENST00000394258 TMEM132EQ6IEE7 984 aa25.85■■□□□ 1.73
RCCD1-201ENST00000394258 CARD14Q9BXL6 1004 aa25.85■■□□□ 1.73
RCCD1-201ENST00000394258 PLEKHH1Q9ULM0 1364 aa25.84■■□□□ 1.73
RCCD1-201ENST00000394258 ERVK-7P63135 1459 aa25.83■■□□□ 1.73
RCCD1-201ENST00000394258 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
RCCD1-201ENST00000394258 MYOM2P54296 1465 aa25.83■■□□□ 1.73
RCCD1-201ENST00000394258 MYOM1P52179 1685 aa25.82■■□□□ 1.72
RCCD1-201ENST00000394258 NPATQ14207 1427 aa25.82■■□□□ 1.72
RCCD1-201ENST00000394258 INSRP06213 1382 aa25.82■■□□□ 1.72
RCCD1-201ENST00000394258 POGZQ7Z3K3 1410 aa25.81■■□□□ 1.72
RCCD1-201ENST00000394258 ZMYM4Q5VZL5 1548 aa25.81■■□□□ 1.72
RCCD1-201ENST00000394258 KIAA1210Q9ULL0 1709 aa25.8■■□□□ 1.72
RCCD1-201ENST00000394258 NOP58Q9Y2X3 529 aaKnown RBP25.8■■□□□ 1.72
RCCD1-201ENST00000394258 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
RCCD1-201ENST00000394258 SKAP1Q86WV1 359 aa25.8■■□□□ 1.72
RCCD1-201ENST00000394258 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
RCCD1-201ENST00000394258 CENPJQ9HC77 1338 aaPredicted RBP25.79■■□□□ 1.72
RCCD1-201ENST00000394258 C20orf194Q5TEA3 1177 aa25.77■■□□□ 1.72
RCCD1-201ENST00000394258 TNNT2P45379 298 aaPredicted RBP25.77■■□□□ 1.72
RCCD1-201ENST00000394258 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
RCCD1-201ENST00000394258 NEURL4Q96JN8 1562 aa25.76■■□□□ 1.71
RCCD1-201ENST00000394258 APAF1O14727 1248 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 SLC24A1O60721 1099 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 PIK3C2GO75747 1445 aa25.75■■□□□ 1.71
RCCD1-201ENST00000394258 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
RCCD1-201ENST00000394258 C14orf93Q9H972 538 aaKnown RBP25.73■■□□□ 1.71
RCCD1-201ENST00000394258 NPC1L1Q9UHC9 1359 aa25.73■■□□□ 1.71
RCCD1-201ENST00000394258 ANP32AP39687 249 aaKnown RBP25.73■■□□□ 1.71
RCCD1-201ENST00000394258 IFT172Q9UG01 1749 aa25.72■■□□□ 1.71
RCCD1-201ENST00000394258 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
RCCD1-201ENST00000394258 NPM2Q86SE8 214 aaKnown RBP25.71■■□□□ 1.71
RCCD1-201ENST00000394258 NRXN1Q9ULB1 1477 aa25.71■■□□□ 1.71
RCCD1-201ENST00000394258 PRKCSHP14314 528 aaPredicted RBP25.71■■□□□ 1.71
RCCD1-201ENST00000394258 HECW2Q9P2P5 1572 aa25.7■■□□□ 1.7
RCCD1-201ENST00000394258 ZNF521Q96K83 1311 aa25.7■■□□□ 1.7
RCCD1-201ENST00000394258 IPO9Q96P70 1041 aaKnown RBP25.7■■□□□ 1.7
RCCD1-201ENST00000394258 SPINK5Q9NQ38 1064 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-201ENST00000394258 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
RCCD1-201ENST00000394258 TCERG1O14776 1098 aaKnown RBP25.66■■□□□ 1.7
RCCD1-201ENST00000394258 PDE4AP27815 886 aa25.66■■□□□ 1.7
RCCD1-201ENST00000394258 SLFN5Q08AF3 891 aa25.66■■□□□ 1.7
RCCD1-201ENST00000394258 ABCC3O15438 1527 aa25.66■■□□□ 1.7
RCCD1-201ENST00000394258 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
RCCD1-201ENST00000394258 CFAP74Q9C0B2 1584 aa25.65■■□□□ 1.7
RCCD1-201ENST00000394258 NSD3Q9BZ95 1437 aa25.64■■□□□ 1.7
RCCD1-201ENST00000394258 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
RCCD1-201ENST00000394258 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
RCCD1-201ENST00000394258 IDI1Q13907 227 aa25.62■■□□□ 1.69
RCCD1-201ENST00000394258 PPLO60437 1756 aa25.62■■□□□ 1.69
RCCD1-201ENST00000394258 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
RCCD1-201ENST00000394258 ZBTB47Q9UFB7 747 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-201ENST00000394258 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
RCCD1-201ENST00000394258 STK26Q9P289 416 aa25.6■■□□□ 1.69
RCCD1-201ENST00000394258 VGFO15240 615 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-201ENST00000394258 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
RCCD1-201ENST00000394258 BACH2Q9BYV9 841 aa25.59■■□□□ 1.69
RCCD1-201ENST00000394258 ADGRB1O14514 1584 aa25.59■■□□□ 1.69
RCCD1-201ENST00000394258 SETBP1Q9Y6X0 1596 aa25.59■■□□□ 1.69
RCCD1-201ENST00000394258 SIGLEC1Q9BZZ2 1709 aa25.58■■□□□ 1.68
RCCD1-201ENST00000394258 MYO3AQ8NEV4 1616 aa25.58■■□□□ 1.68
RCCD1-201ENST00000394258 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
RCCD1-201ENST00000394258 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
RCCD1-201ENST00000394258 BCAR3O75815 825 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms