RNA–Protein interactions for RNA: ENST00000394223.1

NDUFC1-201, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NDUFC1, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-201ENST00000394223 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
NDUFC1-201ENST00000394223 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
NDUFC1-201ENST00000394223 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
NDUFC1-201ENST00000394223 MED14O60244 1454 aa22.2■■□□□ 1.14
NDUFC1-201ENST00000394223 LTKP29376 864 aa22.18■■□□□ 1.14
NDUFC1-201ENST00000394223 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
NDUFC1-201ENST00000394223 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
NDUFC1-201ENST00000394223 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
NDUFC1-201ENST00000394223 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
NDUFC1-201ENST00000394223 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
NDUFC1-201ENST00000394223 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
NDUFC1-201ENST00000394223 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
NDUFC1-201ENST00000394223 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
NDUFC1-201ENST00000394223 PPLO60437 1756 aa22.1■■□□□ 1.13
NDUFC1-201ENST00000394223 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
NDUFC1-201ENST00000394223 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.13
NDUFC1-201ENST00000394223 BCANQ96GW7 911 aa22.08■■□□□ 1.13
NDUFC1-201ENST00000394223 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
NDUFC1-201ENST00000394223 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
NDUFC1-201ENST00000394223 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
NDUFC1-201ENST00000394223 MYOM2P54296 1465 aa22.03■■□□□ 1.12
NDUFC1-201ENST00000394223 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
NDUFC1-201ENST00000394223 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.12
NDUFC1-201ENST00000394223 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
NDUFC1-201ENST00000394223 NEUROD1Q13562 356 aa22■■□□□ 1.11
NDUFC1-201ENST00000394223 SLC26A8Q96RN1 970 aa22■■□□□ 1.11
NDUFC1-201ENST00000394223 TBX22Q9Y458 520 aa22■■□□□ 1.11
NDUFC1-201ENST00000394223 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
NDUFC1-201ENST00000394223 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
NDUFC1-201ENST00000394223 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
NDUFC1-201ENST00000394223 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
NDUFC1-201ENST00000394223 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
NDUFC1-201ENST00000394223 ADGRF5Q8IZF2 1346 aa21.97■■□□□ 1.11
NDUFC1-201ENST00000394223 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
NDUFC1-201ENST00000394223 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
NDUFC1-201ENST00000394223 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.1
NDUFC1-201ENST00000394223 PIK3C2GO75747 1445 aa21.95■■□□□ 1.1
NDUFC1-201ENST00000394223 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
NDUFC1-201ENST00000394223 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
NDUFC1-201ENST00000394223 CPS1P31327 1500 aa21.92■■□□□ 1.1
NDUFC1-201ENST00000394223 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
NDUFC1-201ENST00000394223 LAMC1P11047 1609 aa21.91■■□□□ 1.1
NDUFC1-201ENST00000394223 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
NDUFC1-201ENST00000394223 KCNA6P17658 529 aa21.91■■□□□ 1.1
NDUFC1-201ENST00000394223 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
NDUFC1-201ENST00000394223 NWD1Q149M9 1564 aa21.91■■□□□ 1.1
NDUFC1-201ENST00000394223 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
NDUFC1-201ENST00000394223 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
NDUFC1-201ENST00000394223 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
NDUFC1-201ENST00000394223 C14orf93Q9H972 538 aaKnown RBP21.87■■□□□ 1.09
NDUFC1-201ENST00000394223 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
NDUFC1-201ENST00000394223 METP08581 1390 aa21.87■■□□□ 1.09
NDUFC1-201ENST00000394223 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
NDUFC1-201ENST00000394223 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
NDUFC1-201ENST00000394223 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
NDUFC1-201ENST00000394223 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
NDUFC1-201ENST00000394223 PTPRUQ92729 1446 aa21.82■■□□□ 1.08
NDUFC1-201ENST00000394223 CFAP70Q5T0N1 1121 aa21.82■■□□□ 1.08
NDUFC1-201ENST00000394223 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
NDUFC1-201ENST00000394223 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
NDUFC1-201ENST00000394223 CERKQ8TCT0 537 aa21.81■■□□□ 1.08
NDUFC1-201ENST00000394223 LRRC7Q96NW7 1537 aa21.8■■□□□ 1.08
NDUFC1-201ENST00000394223 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
NDUFC1-201ENST00000394223 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
NDUFC1-201ENST00000394223 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
NDUFC1-201ENST00000394223 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
NDUFC1-201ENST00000394223 PTCH1Q13635 1447 aa21.77■■□□□ 1.08
NDUFC1-201ENST00000394223 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
NDUFC1-201ENST00000394223 ADGRB1O14514 1584 aa21.77■■□□□ 1.08
NDUFC1-201ENST00000394223 TMEM94Q12767 1356 aa21.75■■□□□ 1.07
NDUFC1-201ENST00000394223 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
NDUFC1-201ENST00000394223 TECPR2O15040 1411 aa21.75■■□□□ 1.07
NDUFC1-201ENST00000394223 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
NDUFC1-201ENST00000394223 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
NDUFC1-201ENST00000394223 STK26Q9P289 416 aa21.73■■□□□ 1.07
NDUFC1-201ENST00000394223 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
NDUFC1-201ENST00000394223 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
NDUFC1-201ENST00000394223 ROBO2Q9HCK4 1378 aa21.7■■□□□ 1.06
NDUFC1-201ENST00000394223 DLC1Q96QB1 1528 aa21.7■■□□□ 1.06
NDUFC1-201ENST00000394223 NBPF8Q3BBV2 869 aa21.69■■□□□ 1.06
NDUFC1-201ENST00000394223 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
NDUFC1-201ENST00000394223 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
NDUFC1-201ENST00000394223 ROCK2O75116 1388 aaKnown RBP21.68■■□□□ 1.06
NDUFC1-201ENST00000394223 MSH6P52701 1360 aa21.68■■□□□ 1.06
NDUFC1-201ENST00000394223 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
NDUFC1-201ENST00000394223 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
NDUFC1-201ENST00000394223 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
NDUFC1-201ENST00000394223 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
NDUFC1-201ENST00000394223 TRAK1Q9UPV9 953 aa21.65■■□□□ 1.06
NDUFC1-201ENST00000394223 ADGRL3Q9HAR2 1447 aa21.64■■□□□ 1.06
NDUFC1-201ENST00000394223 GPRASP1Q5JY77 1395 aa21.64■■□□□ 1.06
NDUFC1-201ENST00000394223 C19orf44Q9H6X5 657 aa21.63■■□□□ 1.05
NDUFC1-201ENST00000394223 TOM1O60784 492 aa21.62■■□□□ 1.05
NDUFC1-201ENST00000394223 POGKQ9P215 609 aa21.62■■□□□ 1.05
NDUFC1-201ENST00000394223 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
NDUFC1-201ENST00000394223 DCCP43146 1447 aa21.62■■□□□ 1.05
NDUFC1-201ENST00000394223 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
NDUFC1-201ENST00000394223 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
NDUFC1-201ENST00000394223 PRAM1Q96QH2 718 aa21.61■■□□□ 1.05
NDUFC1-201ENST00000394223 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms