RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
CCDC142-202ENST00000393965 KANK1Q14678 1352 aa18.4■□□□□ 0.54
CCDC142-202ENST00000393965 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
CCDC142-202ENST00000393965 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
CCDC142-202ENST00000393965 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
CCDC142-202ENST00000393965 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
CCDC142-202ENST00000393965 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
CCDC142-202ENST00000393965 ABCA6Q8N139 1617 aa18.37■□□□□ 0.53
CCDC142-202ENST00000393965 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
CCDC142-202ENST00000393965 MYOM1P52179 1685 aa18.36■□□□□ 0.53
CCDC142-202ENST00000393965 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
CCDC142-202ENST00000393965 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
CCDC142-202ENST00000393965 SCAF11Q99590 1463 aaKnown RBP18.35■□□□□ 0.53
CCDC142-202ENST00000393965 KIF1BO60333 1816 aa18.35■□□□□ 0.53
CCDC142-202ENST00000393965 ZNF518AQ6AHZ1 1483 aa18.35■□□□□ 0.53
CCDC142-202ENST00000393965 DEKP35659 375 aaKnown RBP18.34■□□□□ 0.53
CCDC142-202ENST00000393965 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
CCDC142-202ENST00000393965 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.52
CCDC142-202ENST00000393965 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.52
CCDC142-202ENST00000393965 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
CCDC142-202ENST00000393965 AMER1Q5JTC6 1135 aaPredicted RBP18.32■□□□□ 0.52
CCDC142-202ENST00000393965 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
CCDC142-202ENST00000393965 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
CCDC142-202ENST00000393965 NOS1P29475 1434 aa18.31■□□□□ 0.52
CCDC142-202ENST00000393965 NPATQ14207 1427 aa18.31■□□□□ 0.52
CCDC142-202ENST00000393965 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
CCDC142-202ENST00000393965 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
CCDC142-202ENST00000393965 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
CCDC142-202ENST00000393965 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
CCDC142-202ENST00000393965 PLIN1O60240 522 aa18.28■□□□□ 0.52
CCDC142-202ENST00000393965 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
CCDC142-202ENST00000393965 ERICH6BQ5W0A0 696 aa18.27■□□□□ 0.52
CCDC142-202ENST00000393965 ERVK-7P63135 1459 aa18.27■□□□□ 0.52
CCDC142-202ENST00000393965 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.51
CCDC142-202ENST00000393965 HECW2Q9P2P5 1572 aa18.27■□□□□ 0.51
CCDC142-202ENST00000393965 ANP32AP39687 249 aaKnown RBP18.26■□□□□ 0.51
CCDC142-202ENST00000393965 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
CCDC142-202ENST00000393965 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
CCDC142-202ENST00000393965 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
CCDC142-202ENST00000393965 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
CCDC142-202ENST00000393965 SYNMO15061 1565 aa18.25■□□□□ 0.51
CCDC142-202ENST00000393965 CCDC146Q8IYE0 955 aa18.24■□□□□ 0.51
CCDC142-202ENST00000393965 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
CCDC142-202ENST00000393965 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
CCDC142-202ENST00000393965 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
CCDC142-202ENST00000393965 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
CCDC142-202ENST00000393965 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
CCDC142-202ENST00000393965 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
CCDC142-202ENST00000393965 MYOM2P54296 1465 aa18.23■□□□□ 0.51
CCDC142-202ENST00000393965 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
CCDC142-202ENST00000393965 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
CCDC142-202ENST00000393965 YEATS2Q9ULM3 1422 aa18.22■□□□□ 0.51
CCDC142-202ENST00000393965 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
CCDC142-202ENST00000393965 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
CCDC142-202ENST00000393965 PPLO60437 1756 aa18.21■□□□□ 0.51
CCDC142-202ENST00000393965 ABCC3O15438 1527 aa18.21■□□□□ 0.51
CCDC142-202ENST00000393965 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
CCDC142-202ENST00000393965 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
CCDC142-202ENST00000393965 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
CCDC142-202ENST00000393965 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
CCDC142-202ENST00000393965 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CCDC142-202ENST00000393965 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
CCDC142-202ENST00000393965 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC142-202ENST00000393965 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
CCDC142-202ENST00000393965 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
CCDC142-202ENST00000393965 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
CCDC142-202ENST00000393965 CFAP74Q9C0B2 1584 aa18.17■□□□□ 0.5
CCDC142-202ENST00000393965 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
CCDC142-202ENST00000393965 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
CCDC142-202ENST00000393965 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
CCDC142-202ENST00000393965 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
CCDC142-202ENST00000393965 RICTORQ6R327 1708 aa18.16■□□□□ 0.5
CCDC142-202ENST00000393965 ZMYM4Q5VZL5 1548 aa18.15■□□□□ 0.5
CCDC142-202ENST00000393965 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
CCDC142-202ENST00000393965 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
CCDC142-202ENST00000393965 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC142-202ENST00000393965 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
CCDC142-202ENST00000393965 STAC3Q96MF2 364 aa18.15■□□□□ 0.5
CCDC142-202ENST00000393965 CENPJQ9HC77 1338 aaPredicted RBP18.15■□□□□ 0.5
CCDC142-202ENST00000393965 ADGRB1O14514 1584 aa18.14■□□□□ 0.5
CCDC142-202ENST00000393965 QRICH2Q9H0J4 1663 aa18.14■□□□□ 0.5
CCDC142-202ENST00000393965 TSPOAP1O95153 1857 aa18.14■□□□□ 0.49
CCDC142-202ENST00000393965 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
CCDC142-202ENST00000393965 IDI1Q13907 227 aa18.13■□□□□ 0.49
CCDC142-202ENST00000393965 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
CCDC142-202ENST00000393965 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
CCDC142-202ENST00000393965 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
CCDC142-202ENST00000393965 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
CCDC142-202ENST00000393965 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
CCDC142-202ENST00000393965 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
CCDC142-202ENST00000393965 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
CCDC142-202ENST00000393965 MLECQ14165 292 aa18.11■□□□□ 0.49
CCDC142-202ENST00000393965 STK26Q9P289 416 aa18.1■□□□□ 0.49
CCDC142-202ENST00000393965 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
CCDC142-202ENST00000393965 APAF1O14727 1248 aa18.1■□□□□ 0.49
CCDC142-202ENST00000393965 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
CCDC142-202ENST00000393965 NEO1Q92859 1461 aa18.09■□□□□ 0.49
CCDC142-202ENST00000393965 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
CCDC142-202ENST00000393965 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.49
CCDC142-202ENST00000393965 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms