RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
PTPA-207ENST00000393370 TERF1P54274 439 aa21.63■■□□□ 1.05
PTPA-207ENST00000393370 NKTRP30414 1462 aaKnown RBP21.62■■□□□ 1.05
PTPA-207ENST00000393370 CCDC173Q0VFZ6 552 aa21.62■■□□□ 1.05
PTPA-207ENST00000393370 SMAP1Q8IYB5 467 aaPredicted RBP21.62■■□□□ 1.05
PTPA-207ENST00000393370 R3HCC1Q9Y3T6 440 aaKnown RBP21.62■■□□□ 1.05
PTPA-207ENST00000393370 PPP1R9BQ96SB3 815 aa21.61■■□□□ 1.05
PTPA-207ENST00000393370 ZHX1Q9UKY1 873 aaPredicted RBP21.61■■□□□ 1.05
PTPA-207ENST00000393370 MSNP26038 577 aaKnown RBP21.6■■□□□ 1.05
PTPA-207ENST00000393370 C22orf23Q9BZE7 217 aa21.6■■□□□ 1.05
PTPA-207ENST00000393370 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
PTPA-207ENST00000393370 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
PTPA-207ENST00000393370 CAMSAP2Q08AD1 1489 aa21.59■■□□□ 1.05
PTPA-207ENST00000393370 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
PTPA-207ENST00000393370 SLC24A1O60721 1099 aa21.59■■□□□ 1.05
PTPA-207ENST00000393370 PDE3AQ14432 1141 aa21.59■■□□□ 1.05
PTPA-207ENST00000393370 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
PTPA-207ENST00000393370 CCDC146Q8IYE0 955 aa21.58■■□□□ 1.05
PTPA-207ENST00000393370 PRDM10Q9NQV6 1147 aa21.58■■□□□ 1.05
PTPA-207ENST00000393370 TNPO1Q92973 898 aaKnown RBP21.58■■□□□ 1.05
PTPA-207ENST00000393370 NASPP49321 788 aaPredicted RBP21.57■■□□□ 1.04
PTPA-207ENST00000393370 MFAP1P55081 439 aaKnown RBP21.57■■□□□ 1.04
PTPA-207ENST00000393370 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
PTPA-207ENST00000393370 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
PTPA-207ENST00000393370 DDIT3P35638 169 aa21.56■■□□□ 1.04
PTPA-207ENST00000393370 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
PTPA-207ENST00000393370 FBLN2P98095 1184 aa21.56■■□□□ 1.04
PTPA-207ENST00000393370 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
PTPA-207ENST00000393370 PCDHB15Q9Y5E8 787 aa21.56■■□□□ 1.04
PTPA-207ENST00000393370 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
PTPA-207ENST00000393370 HSCBQ8IWL3 235 aa21.55■■□□□ 1.04
PTPA-207ENST00000393370 UQCRHLA0A096LP55 91 aa21.55■■□□□ 1.04
PTPA-207ENST00000393370 UQCRHP07919 91 aa21.55■■□□□ 1.04
PTPA-207ENST00000393370 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
PTPA-207ENST00000393370 TESK2Q96S53 571 aa21.54■■□□□ 1.04
PTPA-207ENST00000393370 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
PTPA-207ENST00000393370 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
PTPA-207ENST00000393370 APAF1O14727 1248 aa21.52■■□□□ 1.04
PTPA-207ENST00000393370 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
PTPA-207ENST00000393370 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
PTPA-207ENST00000393370 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
PTPA-207ENST00000393370 E9PSI1 815 aa21.5■■□□□ 1.03
PTPA-207ENST00000393370 GBP4Q96PP9 640 aa21.5■■□□□ 1.03
PTPA-207ENST00000393370 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
PTPA-207ENST00000393370 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
PTPA-207ENST00000393370 NUP155O75694 1391 aa21.49■■□□□ 1.03
PTPA-207ENST00000393370 PDE4CQ08493 712 aa21.49■■□□□ 1.03
PTPA-207ENST00000393370 NINLQ9Y2I6 1382 aa21.47■■□□□ 1.03
PTPA-207ENST00000393370 RAB3GAP1Q15042 981 aa21.47■■□□□ 1.03
PTPA-207ENST00000393370 MTERF4Q7Z6M4 381 aaKnown RBP21.47■■□□□ 1.03
PTPA-207ENST00000393370 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.46■■□□□ 1.03
PTPA-207ENST00000393370 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
PTPA-207ENST00000393370 DMTNQ08495 405 aa21.46■■□□□ 1.03
PTPA-207ENST00000393370 TNNQ9UQP3 1299 aa21.46■■□□□ 1.03
PTPA-207ENST00000393370 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 DYNC1I1O14576 645 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 ZNF500O60304 480 aaPredicted RBP21.45■■□□□ 1.02
PTPA-207ENST00000393370 RLBP1P12271 317 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 TRPM1Q7Z4N2 1603 aa21.45■■□□□ 1.02
PTPA-207ENST00000393370 NOL7Q9UMY1 257 aaKnown RBP21.44■■□□□ 1.02
PTPA-207ENST00000393370 UTP14CQ5TAP6 766 aaKnown RBP21.44■■□□□ 1.02
PTPA-207ENST00000393370 SMC5Q8IY18 1101 aa21.44■■□□□ 1.02
PTPA-207ENST00000393370 ANKRD30AQ9BXX3 1397 aa21.44■■□□□ 1.02
PTPA-207ENST00000393370 ZSCAN20P17040 1043 aaPredicted RBP21.43■■□□□ 1.02
PTPA-207ENST00000393370 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
PTPA-207ENST00000393370 EIF4G3O43432 1585 aaKnown RBP21.42■■□□□ 1.02
PTPA-207ENST00000393370 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
PTPA-207ENST00000393370 TMF1P82094 1093 aa21.42■■□□□ 1.02
PTPA-207ENST00000393370 CIZ1Q9ULV3 898 aaPredicted RBP21.42■■□□□ 1.02
PTPA-207ENST00000393370 CCDC144AA2RUR9 1427 aa21.41■■□□□ 1.02
PTPA-207ENST00000393370 MAGI2Q86UL8 1455 aa21.41■■□□□ 1.02
PTPA-207ENST00000393370 RWDD1Q9H446 243 aaPredicted RBP21.41■■□□□ 1.02
PTPA-207ENST00000393370 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
PTPA-207ENST00000393370 HS1BP3Q53T59 392 aa21.41■■□□□ 1.02
PTPA-207ENST00000393370 ADGRL2O95490 1459 aa21.4■■□□□ 1.02
PTPA-207ENST00000393370 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
PTPA-207ENST00000393370 FOXD4L1Q9NU39 408 aa21.4■■□□□ 1.02
PTPA-207ENST00000393370 PTMSP20962 102 aa21.4■■□□□ 1.02
PTPA-207ENST00000393370 BBXQ8WY36 941 aaPredicted RBP21.4■■□□□ 1.02
PTPA-207ENST00000393370 ZNF777Q9ULD5 760 aaPredicted RBP21.4■■□□□ 1.02
PTPA-207ENST00000393370 HSP90AB1P08238 724 aaKnown RBP21.39■■□□□ 1.02
PTPA-207ENST00000393370 RGL3Q3MIN7 710 aa21.39■■□□□ 1.02
PTPA-207ENST00000393370 CCDC94Q9BW85 323 aaPredicted RBP21.39■■□□□ 1.02
PTPA-207ENST00000393370 GPRASP1Q5JY77 1395 aa21.39■■□□□ 1.01
PTPA-207ENST00000393370 SNX21Q969T3 373 aa21.39■■□□□ 1.01
PTPA-207ENST00000393370 CFDP1Q9UEE9 299 aaPredicted RBP21.39■■□□□ 1.01
PTPA-207ENST00000393370 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
PTPA-207ENST00000393370 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
PTPA-207ENST00000393370 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
PTPA-207ENST00000393370 IBTKQ9P2D0 1353 aaPredicted RBP21.37■■□□□ 1.01
PTPA-207ENST00000393370 KLHL40Q2TBA0 621 aa21.36■■□□□ 1.01
PTPA-207ENST00000393370 GTF2E1P29083 439 aaPredicted RBP21.35■■□□□ 1.01
PTPA-207ENST00000393370 RARSP54136 660 aaKnown RBP21.35■■□□□ 1.01
PTPA-207ENST00000393370 SSFA2P28290 1259 aa21.35■■□□□ 1.01
PTPA-207ENST00000393370 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
PTPA-207ENST00000393370 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
PTPA-207ENST00000393370 PDLIM2Q96JY6 352 aa21.35■■□□□ 1.01
PTPA-207ENST00000393370 ZKSCAN5Q9Y2L8 839 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms