RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 MINK1Q8N4C8 1332 aaPredicted RBP18.68■□□□□ 0.58
PTGFRN-201ENST00000393203 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
PTGFRN-201ENST00000393203 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
PTGFRN-201ENST00000393203 R3HCC1Q9Y3T6 440 aaKnown RBP18.67■□□□□ 0.58
PTGFRN-201ENST00000393203 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
PTGFRN-201ENST00000393203 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
PTGFRN-201ENST00000393203 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
PTGFRN-201ENST00000393203 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
PTGFRN-201ENST00000393203 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
PTGFRN-201ENST00000393203 REC8O95072 547 aa18.65■□□□□ 0.58
PTGFRN-201ENST00000393203 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
PTGFRN-201ENST00000393203 BICD2Q8TD16 824 aa18.64■□□□□ 0.58
PTGFRN-201ENST00000393203 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.57
PTGFRN-201ENST00000393203 COG3Q96JB2 828 aa18.63■□□□□ 0.57
PTGFRN-201ENST00000393203 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.63■□□□□ 0.57
PTGFRN-201ENST00000393203 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
PTGFRN-201ENST00000393203 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
PTGFRN-201ENST00000393203 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
PTGFRN-201ENST00000393203 HOMER1Q86YM7 354 aa18.61■□□□□ 0.57
PTGFRN-201ENST00000393203 HMOX1P09601 288 aa18.61■□□□□ 0.57
PTGFRN-201ENST00000393203 PATL2C9JE40 543 aaKnown RBP18.61■□□□□ 0.57
PTGFRN-201ENST00000393203 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
PTGFRN-201ENST00000393203 AKNAQ7Z591 1439 aa18.6■□□□□ 0.57
PTGFRN-201ENST00000393203 NASPP49321 788 aaPredicted RBP18.6■□□□□ 0.57
PTGFRN-201ENST00000393203 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
PTGFRN-201ENST00000393203 MARCH6O60337 910 aa18.6■□□□□ 0.57
PTGFRN-201ENST00000393203 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
PTGFRN-201ENST00000393203 TRAK2O60296 914 aa18.59■□□□□ 0.57
PTGFRN-201ENST00000393203 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
PTGFRN-201ENST00000393203 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
PTGFRN-201ENST00000393203 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
PTGFRN-201ENST00000393203 ZKSCAN1P17029 563 aaPredicted RBP18.58■□□□□ 0.57
PTGFRN-201ENST00000393203 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
PTGFRN-201ENST00000393203 SMC3Q9UQE7 1217 aa18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 IFIT2P09913 472 aaKnown RBP18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 RBM10P98175 930 aaKnown RBP18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 FKBP5Q13451 457 aaPredicted RBP18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 TSR1Q2NL82 804 aaKnown RBP18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 CAVIN1Q6NZI2 390 aaKnown RBP18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
PTGFRN-201ENST00000393203 MRE11P49959 708 aa18.56■□□□□ 0.56
PTGFRN-201ENST00000393203 NUCB2P80303 420 aa18.56■□□□□ 0.56
PTGFRN-201ENST00000393203 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTGFRN-201ENST00000393203 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
PTGFRN-201ENST00000393203 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
PTGFRN-201ENST00000393203 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
PTGFRN-201ENST00000393203 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 AKAP17AQ02040 695 aaKnown RBP18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 PCMTD1Q96MG8 357 aaPredicted RBP18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 SASS6Q6UVJ0 657 aa18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 TEFQ10587 303 aa18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 MPNDQ8N594 471 aa18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
PTGFRN-201ENST00000393203 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 KDM4AO75164 1064 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 APPP05067 770 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
PTGFRN-201ENST00000393203 TPM1P09493 284 aa18.52■□□□□ 0.56
PTGFRN-201ENST00000393203 SETQ01105 290 aaPredicted RBP18.52■□□□□ 0.56
PTGFRN-201ENST00000393203 PDZRN3Q9UPQ7 1066 aa18.52■□□□□ 0.56
PTGFRN-201ENST00000393203 EID1Q9Y6B2 187 aa18.52■□□□□ 0.56
PTGFRN-201ENST00000393203 GTF2E1P29083 439 aaPredicted RBP18.52■□□□□ 0.55
PTGFRN-201ENST00000393203 CPLX1O14810 134 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 GPS2Q13227 327 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 CEP89Q96ST8 783 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 BCAR3O75815 825 aa18.51■□□□□ 0.55
PTGFRN-201ENST00000393203 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
PTGFRN-201ENST00000393203 CDC45O75419 566 aa18.5■□□□□ 0.55
PTGFRN-201ENST00000393203 TRIM29Q14134 588 aa18.49■□□□□ 0.55
PTGFRN-201ENST00000393203 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
PTGFRN-201ENST00000393203 PRM3Q9NNZ6 103 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 CCDC39Q9UFE4 941 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 G3V3G9 751 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 RAD21O60216 631 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
PTGFRN-201ENST00000393203 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
PTGFRN-201ENST00000393203 NEXNQ0ZGT2 675 aa18.47■□□□□ 0.55
PTGFRN-201ENST00000393203 TEX35Q5T0J7 233 aa18.47■□□□□ 0.55
PTGFRN-201ENST00000393203 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
PTGFRN-201ENST00000393203 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
PTGFRN-201ENST00000393203 G3BP1Q13283 466 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTGFRN-201ENST00000393203 TPM2P07951 284 aa18.46■□□□□ 0.55
PTGFRN-201ENST00000393203 MNS1Q8NEH6 495 aa18.46■□□□□ 0.54
PTGFRN-201ENST00000393203 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 CCDC70Q6NSX1 233 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
PTGFRN-201ENST00000393203 MTHFSP49914 203 aa18.44■□□□□ 0.54
PTGFRN-201ENST00000393203 CPLX2Q6PUV4 134 aaKnown RBP18.44■□□□□ 0.54
PTGFRN-201ENST00000393203 SKAP1Q86WV1 359 aa18.44■□□□□ 0.54
PTGFRN-201ENST00000393203 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms