RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 ZNF326Q5BKZ1 582 aaKnown RBP27.58■■■□□ 2.01
NME1-203ENST00000393196 CLTCL1P53675 1640 aa27.58■■■□□ 2.01
NME1-203ENST00000393196 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
NME1-203ENST00000393196 FOXD1Q16676 465 aa27.57■■■□□ 2
NME1-203ENST00000393196 CERKQ8TCT0 537 aa27.56■■■□□ 2
NME1-203ENST00000393196 ZNF335Q9H4Z2 1342 aaPredicted RBP27.56■■■□□ 2
NME1-203ENST00000393196 RPGRIP1LQ68CZ1 1315 aa27.54■■■□□ 2
NME1-203ENST00000393196 BCANQ96GW7 911 aa27.54■■■□□ 2
NME1-203ENST00000393196 LTBP4Q8N2S1 1624 aa27.52■■■□□ 2
NME1-203ENST00000393196 CPS1P31327 1500 aa27.51■■■□□ 2
NME1-203ENST00000393196 IQSEC2Q5JU85 1478 aa27.51■■□□□ 1.99
NME1-203ENST00000393196 KIF1BO60333 1816 aa27.49■■□□□ 1.99
NME1-203ENST00000393196 MYO5BQ9ULV0 1848 aa27.48■■□□□ 1.99
NME1-203ENST00000393196 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
NME1-203ENST00000393196 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
NME1-203ENST00000393196 ANKRD30BQ9BXX2 1392 aa27.46■■□□□ 1.99
NME1-203ENST00000393196 SLC26A8Q96RN1 970 aa27.45■■□□□ 1.98
NME1-203ENST00000393196 DIP2AQ14689 1571 aa27.43■■□□□ 1.98
NME1-203ENST00000393196 SPATA31E1Q6ZUB1 1445 aa27.42■■□□□ 1.98
NME1-203ENST00000393196 NEXMIFQ5QGS0 1516 aa27.42■■□□□ 1.98
NME1-203ENST00000393196 NUTM2DQ5VT03 806 aaPredicted RBP27.42■■□□□ 1.98
NME1-203ENST00000393196 FBXO41Q8TF61 875 aa27.42■■□□□ 1.98
NME1-203ENST00000393196 PIK3R4Q99570 1358 aa27.42■■□□□ 1.98
NME1-203ENST00000393196 KCNA6P17658 529 aa27.41■■□□□ 1.98
NME1-203ENST00000393196 ADAMTS13Q76LX8 1427 aa27.37■■□□□ 1.97
NME1-203ENST00000393196 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
NME1-203ENST00000393196 RGL3Q3MIN7 710 aa27.36■■□□□ 1.97
NME1-203ENST00000393196 NKTRP30414 1462 aaKnown RBP27.34■■□□□ 1.97
NME1-203ENST00000393196 STAC3Q96MF2 364 aa27.31■■□□□ 1.96
NME1-203ENST00000393196 SENP3Q9H4L4 574 aaPredicted RBP27.3■■□□□ 1.96
NME1-203ENST00000393196 LRRC7Q96NW7 1537 aa27.3■■□□□ 1.96
NME1-203ENST00000393196 NWD1Q149M9 1564 aa27.3■■□□□ 1.96
NME1-203ENST00000393196 PROSER2Q86WR7 435 aaPredicted RBP27.26■■□□□ 1.95
NME1-203ENST00000393196 PPLO60437 1756 aa27.26■■□□□ 1.95
NME1-203ENST00000393196 NRXN3Q9Y4C0 1643 aa27.24■■□□□ 1.95
NME1-203ENST00000393196 MYOM2P54296 1465 aa27.24■■□□□ 1.95
NME1-203ENST00000393196 TOM1O60784 492 aa27.23■■□□□ 1.95
NME1-203ENST00000393196 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
NME1-203ENST00000393196 NCOA3Q9Y6Q9 1424 aa27.23■■□□□ 1.95
NME1-203ENST00000393196 UBAP1LF5GYI3 381 aa27.22■■□□□ 1.95
NME1-203ENST00000393196 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
NME1-203ENST00000393196 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
NME1-203ENST00000393196 ADGRF5Q8IZF2 1346 aa27.21■■□□□ 1.95
NME1-203ENST00000393196 AMOTL2Q9Y2J4 779 aa27.21■■□□□ 1.95
NME1-203ENST00000393196 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.94
NME1-203ENST00000393196 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
NME1-203ENST00000393196 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
NME1-203ENST00000393196 METP08581 1390 aa27.19■■□□□ 1.94
NME1-203ENST00000393196 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
NME1-203ENST00000393196 IFT172Q9UG01 1749 aa27.18■■□□□ 1.94
NME1-203ENST00000393196 NRXN1Q9ULB1 1477 aa27.17■■□□□ 1.94
NME1-203ENST00000393196 PTPRUQ92729 1446 aa27.16■■□□□ 1.94
NME1-203ENST00000393196 MSH6P52701 1360 aa27.14■■□□□ 1.94
NME1-203ENST00000393196 DCAF11Q8TEB1 546 aa27.14■■□□□ 1.94
NME1-203ENST00000393196 PRAG1Q86YV5 1406 aa27.14■■□□□ 1.93
NME1-203ENST00000393196 C14orf93Q9H972 538 aaKnown RBP27.12■■□□□ 1.93
NME1-203ENST00000393196 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
NME1-203ENST00000393196 PTCH1Q13635 1447 aa27.11■■□□□ 1.93
NME1-203ENST00000393196 C14orf37Q86TY3 774 aa27.11■■□□□ 1.93
NME1-203ENST00000393196 PCGF6Q9BYE7 350 aa27.11■■□□□ 1.93
NME1-203ENST00000393196 LAMC1P11047 1609 aa27.08■■□□□ 1.93
NME1-203ENST00000393196 KDM2AQ9Y2K7 1162 aa27.08■■□□□ 1.93
NME1-203ENST00000393196 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
NME1-203ENST00000393196 LRPPRCP42704 1394 aaKnown RBP27.07■■□□□ 1.92
NME1-203ENST00000393196 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
NME1-203ENST00000393196 CADPS2Q86UW7 1296 aa27.04■■□□□ 1.92
NME1-203ENST00000393196 ABCC11Q96J66 1382 aa27.04■■□□□ 1.92
NME1-203ENST00000393196 TECPR2O15040 1411 aa27.03■■□□□ 1.92
NME1-203ENST00000393196 DCCP43146 1447 aa27.03■■□□□ 1.92
NME1-203ENST00000393196 RBM33Q96EV2 1170 aaKnown RBP27.03■■□□□ 1.92
NME1-203ENST00000393196 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
NME1-203ENST00000393196 ATF3P18847 181 aa27.02■■□□□ 1.92
NME1-203ENST00000393196 CFAP70Q5T0N1 1121 aa27.02■■□□□ 1.92
NME1-203ENST00000393196 PIP4K2BP78356 416 aa27.01■■□□□ 1.91
NME1-203ENST00000393196 YTHDC2Q9H6S0 1430 aaKnown RBP27■■□□□ 1.91
NME1-203ENST00000393196 XIRP1Q702N8 1843 aaKnown RBP27■■□□□ 1.91
NME1-203ENST00000393196 NEUROD1Q13562 356 aa27■■□□□ 1.91
NME1-203ENST00000393196 SIRT1Q96EB6 747 aa27■■□□□ 1.91
NME1-203ENST00000393196 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
NME1-203ENST00000393196 ROBO2Q9HCK4 1378 aa26.99■■□□□ 1.91
NME1-203ENST00000393196 ADGRL3Q9HAR2 1447 aa26.99■■□□□ 1.91
NME1-203ENST00000393196 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
NME1-203ENST00000393196 STK26Q9P289 416 aa26.98■■□□□ 1.91
NME1-203ENST00000393196 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
NME1-203ENST00000393196 ASXL1Q8IXJ9 1541 aa26.96■■□□□ 1.91
NME1-203ENST00000393196 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
NME1-203ENST00000393196 L3MBTL2Q969R5 705 aa26.96■■□□□ 1.91
NME1-203ENST00000393196 FAM135BQ49AJ0 1406 aa26.96■■□□□ 1.91
NME1-203ENST00000393196 SLAIN2Q9P270 581 aa26.95■■□□□ 1.9
NME1-203ENST00000393196 TONSLQ96HA7 1378 aa26.92■■□□□ 1.9
NME1-203ENST00000393196 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
NME1-203ENST00000393196 ADGRB1O14514 1584 aa26.9■■□□□ 1.9
NME1-203ENST00000393196 DLC1Q96QB1 1528 aa26.89■■□□□ 1.89
NME1-203ENST00000393196 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.88■■□□□ 1.89
NME1-203ENST00000393196 KIAA1210Q9ULL0 1709 aa26.86■■□□□ 1.89
NME1-203ENST00000393196 POGKQ9P215 609 aa26.85■■□□□ 1.89
NME1-203ENST00000393196 WAPLQ7Z5K2 1190 aa26.84■■□□□ 1.89
NME1-203ENST00000393196 HSPA1LP34931 641 aa26.83■■□□□ 1.89
NME1-203ENST00000393196 PRAM1Q96QH2 718 aa26.82■■□□□ 1.88
NME1-203ENST00000393196 NALCNQ8IZF0 1738 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms